RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 IGKV2D-26A0A0A0MRZ7 120 aa13.07□□□□□ -0.32
GRAMD1A-214ENST00000603907 SMIM13P0DJ93 91 aa13.07□□□□□ -0.32
GRAMD1A-214ENST00000603907 ANKRD39Q53RE8 183 aa13.07□□□□□ -0.32
GRAMD1A-214ENST00000603907 C7orf33Q8WU49 177 aa13.07□□□□□ -0.32
GRAMD1A-214ENST00000603907 SND1-IT1Q9HBX3 110 aa13.07□□□□□ -0.32
GRAMD1A-214ENST00000603907 FAM168BA1KXE4 195 aa13.05□□□□□ -0.32
GRAMD1A-214ENST00000603907 A0A0J9YXY3 114 aa13.04□□□□□ -0.32
GRAMD1A-214ENST00000603907 ZNF815PA8K554 130 aa13.04□□□□□ -0.32
GRAMD1A-214ENST00000603907 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
GRAMD1A-214ENST00000603907 A0A0U1RRA0 63 aa13.03□□□□□ -0.32
GRAMD1A-214ENST00000603907 JOSD1Q15040 202 aaPredicted RBP13.03□□□□□ -0.32
GRAMD1A-214ENST00000603907 TP73-AS1Q9UF72 201 aa13.03□□□□□ -0.32
GRAMD1A-214ENST00000603907 KRTAP7-1Q8IUC3 87 aa13.02□□□□□ -0.33
GRAMD1A-214ENST00000603907 MIR7-3HGQ8N6C7 128 aa13.02□□□□□ -0.33
GRAMD1A-214ENST00000603907 IGLV5-37A0A075B6J1 123 aa13.01□□□□□ -0.33
GRAMD1A-214ENST00000603907 M0QXV9 152 aa13.01□□□□□ -0.33
GRAMD1A-214ENST00000603907 TIMM17BO60830 172 aa13.01□□□□□ -0.33
GRAMD1A-214ENST00000603907 RPL24P83731 157 aaKnown RBP13.01□□□□□ -0.33
GRAMD1A-214ENST00000603907 OXTP01178 125 aa12.99□□□□□ -0.33
GRAMD1A-214ENST00000603907 RPL37AP61513 92 aaKnown RBP12.99□□□□□ -0.33
GRAMD1A-214ENST00000603907 LBHQ53QV2 105 aaPredicted RBP12.99□□□□□ -0.33
GRAMD1A-214ENST00000603907 PHF5AQ7RTV0 110 aaKnown RBP12.99□□□□□ -0.33
GRAMD1A-214ENST00000603907 C22orf24Q9Y442 160 aa12.99□□□□□ -0.33
GRAMD1A-214ENST00000603907 LOC107984156A0A0G2JMH3 177 aa12.98□□□□□ -0.33
GRAMD1A-214ENST00000603907 ARL17AQ8IVW1 177 aa12.98□□□□□ -0.33
GRAMD1A-214ENST00000603907 TTTY13Q9BZ97 58 aa12.98□□□□□ -0.33
GRAMD1A-214ENST00000603907 NKAPP1Q8N9T2 125 aa12.97□□□□□ -0.33
GRAMD1A-214ENST00000603907 VPREB1P12018 145 aa12.96□□□□□ -0.33
GRAMD1A-214ENST00000603907 SCGB1D4Q6XE38 83 aa12.96□□□□□ -0.33
GRAMD1A-214ENST00000603907 MRPL55Q7Z7F7 128 aaKnown RBP12.96□□□□□ -0.33
GRAMD1A-214ENST00000603907 PCP2Q8IVA1 136 aa12.96□□□□□ -0.33
GRAMD1A-214ENST00000603907 LITAFQ99732 161 aa12.94□□□□□ -0.34
GRAMD1A-214ENST00000603907 MIEN1Q9BRT3 115 aa12.94□□□□□ -0.34
GRAMD1A-214ENST00000603907 TMEM238C9JI98 176 aa12.93□□□□□ -0.34
GRAMD1A-214ENST00000603907 UBE2BP63146 152 aa12.93□□□□□ -0.34
GRAMD1A-214ENST00000603907 ADAMTSL4-AS1Q5T5F5 129 aa12.93□□□□□ -0.34
GRAMD1A-214ENST00000603907 BOD1L2Q8IYS8 172 aa12.93□□□□□ -0.34
GRAMD1A-214ENST00000603907 DAND5Q8N907 189 aa12.93□□□□□ -0.34
GRAMD1A-214ENST00000603907 HMCN2Q8NDA2 5059 aa12.93□□□□□ -0.34
GRAMD1A-214ENST00000603907 PYY3Q5JQD4 70 aa12.92□□□□□ -0.34
GRAMD1A-214ENST00000603907 VAMP8Q9BV40 100 aa12.92□□□□□ -0.34
GRAMD1A-214ENST00000603907 KRTAP10-4P60372 401 aaPredicted RBP12.91□□□□□ -0.34
GRAMD1A-214ENST00000603907 PRR3P79522 188 aaKnown RBP12.91□□□□□ -0.34
GRAMD1A-214ENST00000603907 UBR4Q5T4S7 5183 aa12.91□□□□□ -0.34
GRAMD1A-214ENST00000603907 Q6ZVH6 145 aa12.9□□□□□ -0.34
GRAMD1A-214ENST00000603907 LINC00167Q96N53 147 aa12.9□□□□□ -0.34
GRAMD1A-214ENST00000603907 SPANXDQ9BXN6 97 aa12.9□□□□□ -0.34
GRAMD1A-214ENST00000603907 SPANXCQ9NY87 97 aa12.9□□□□□ -0.34
GRAMD1A-214ENST00000603907 Q8NDZ9 215 aa12.89□□□□□ -0.35
GRAMD1A-214ENST00000603907 COPS9Q8WXC6 57 aa12.89□□□□□ -0.35
GRAMD1A-214ENST00000603907 PSORS1C2Q9UIG4 136 aa12.89□□□□□ -0.35
GRAMD1A-214ENST00000603907 NDUFC2O95298 119 aa12.88□□□□□ -0.35
GRAMD1A-214ENST00000603907 COX8AP10176 69 aa12.88□□□□□ -0.35
GRAMD1A-214ENST00000603907 SPATA45Q537H7 98 aa12.88□□□□□ -0.35
GRAMD1A-214ENST00000603907 PPDPFQ9H3Y8 114 aa12.88□□□□□ -0.35
GRAMD1A-214ENST00000603907 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
GRAMD1A-214ENST00000603907 M0R378 163 aa12.87□□□□□ -0.35
GRAMD1A-214ENST00000603907 DLEU1O43261 78 aa12.87□□□□□ -0.35
GRAMD1A-214ENST00000603907 LINC00308Q8TCZ7 52 aa12.87□□□□□ -0.35
GRAMD1A-214ENST00000603907 LRP1Q07954 4544 aaKnown RBP12.87□□□□□ -0.35
GRAMD1A-214ENST00000603907 IFITM1P13164 125 aa12.86□□□□□ -0.35
GRAMD1A-214ENST00000603907 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
GRAMD1A-214ENST00000603907 TRBV10-2A0A0K0K1G8 114 aa12.85□□□□□ -0.35
GRAMD1A-214ENST00000603907 GAGE10A6NGK3 116 aa12.84□□□□□ -0.35
GRAMD1A-214ENST00000603907 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
GRAMD1A-214ENST00000603907 KRTAP11-1Q8IUC1 163 aa12.84□□□□□ -0.35
GRAMD1A-214ENST00000603907 SPANXB1Q9NS25 103 aaPredicted RBP12.84□□□□□ -0.35
GRAMD1A-214ENST00000603907 IGLV1-50A0A075B6I6 118 aa12.83□□□□□ -0.36
GRAMD1A-214ENST00000603907 NPC2P61916 151 aa12.83□□□□□ -0.36
GRAMD1A-214ENST00000603907 RPL37AP8A6NKH3 93 aa12.82□□□□□ -0.36
GRAMD1A-214ENST00000603907 NCR3O14931 201 aa12.8□□□□□ -0.36
GRAMD1A-214ENST00000603907 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
GRAMD1A-214ENST00000603907 SLC25A34Q6PIV7 304 aa12.8□□□□□ -0.36
GRAMD1A-214ENST00000603907 IGKV2-28A0A075B6P5 120 aa12.79□□□□□ -0.36
GRAMD1A-214ENST00000603907 IGKV2D-28P01615 120 aa12.79□□□□□ -0.36
GRAMD1A-214ENST00000603907 SRSF9Q13242 221 aaKnown RBP eCLIP12.79□□□□□ -0.36
GRAMD1A-214ENST00000603907 C14orf144Q96I85 54 aa12.79□□□□□ -0.36
GRAMD1A-214ENST00000603907 FAT3Q8TDW7 4589 aa12.78□□□□□ -0.36
GRAMD1A-214ENST00000603907 IGLV7-43P04211 117 aa12.78□□□□□ -0.36
GRAMD1A-214ENST00000603907 S100A12P80511 92 aa12.78□□□□□ -0.36
GRAMD1A-214ENST00000603907 BCE1O60756 84 aa12.77□□□□□ -0.37
GRAMD1A-214ENST00000603907 LINC00518Q8N0U6 118 aa12.77□□□□□ -0.37
GRAMD1A-214ENST00000603907 SPINK6Q6UWN8 80 aa12.76□□□□□ -0.37
GRAMD1A-214ENST00000603907 MUSTN1Q8IVN3 82 aa12.76□□□□□ -0.37
GRAMD1A-214ENST00000603907 HIGD1BQ9P298 99 aa12.76□□□□□ -0.37
GRAMD1A-214ENST00000603907 PRYO14603 147 aa12.75□□□□□ -0.37
GRAMD1A-214ENST00000603907 HNRNPA3P51991 378 aaKnown RBP12.75□□□□□ -0.37
GRAMD1A-214ENST00000603907 REG3GQ6UW15 175 aa12.75□□□□□ -0.37
GRAMD1A-214ENST00000603907 CBY1Q9Y3M2 126 aa12.75□□□□□ -0.37
GRAMD1A-214ENST00000603907 TRBV10-3A0A0K0K1G6 114 aa12.74□□□□□ -0.37
GRAMD1A-214ENST00000603907 DDTP30046 118 aa12.74□□□□□ -0.37
GRAMD1A-214ENST00000603907 S100A7L2Q5SY68 101 aa12.74□□□□□ -0.37
GRAMD1A-214ENST00000603907 TMEM126AQ9H061 195 aa12.74□□□□□ -0.37
GRAMD1A-214ENST00000603907 KCNQ1DNQ9H478 68 aa12.74□□□□□ -0.37
GRAMD1A-214ENST00000603907 IGLV6-57P01721 117 aa12.73□□□□□ -0.37
GRAMD1A-214ENST00000603907 SMIM6P0DI80 62 aa12.72□□□□□ -0.37
GRAMD1A-214ENST00000603907 ZNF861PO60384 105 aa12.71□□□□□ -0.37
GRAMD1A-214ENST00000603907 HIST1H4GQ99525 98 aa12.71□□□□□ -0.37
GRAMD1A-214ENST00000603907 RPL28P46779 137 aaKnown RBP12.7□□□□□ -0.38
GRAMD1A-214ENST00000603907 PKHD1L1Q86WI1 4243 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1302.6 ms