RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 KRTAP7-1Q8IUC3 87 aa12.87□□□□□ -0.35
SIN3B-211ENST00000601141 JOSD1Q15040 202 aaPredicted RBP12.85□□□□□ -0.35
SIN3B-211ENST00000601141 DAND5Q8N907 189 aa12.85□□□□□ -0.35
SIN3B-211ENST00000601141 PCP2Q8IVA1 136 aa12.85□□□□□ -0.35
SIN3B-211ENST00000601141 RPL37AP61513 92 aaKnown RBP12.84□□□□□ -0.35
SIN3B-211ENST00000601141 PLA2G2DQ9UNK4 145 aa12.84□□□□□ -0.35
SIN3B-211ENST00000601141 C22orf24Q9Y442 160 aa12.84□□□□□ -0.35
SIN3B-211ENST00000601141 PLA2G1BP04054 148 aaKnown RBP12.83□□□□□ -0.36
SIN3B-211ENST00000601141 SCGB1D4Q6XE38 83 aa12.83□□□□□ -0.36
SIN3B-211ENST00000601141 NKAPP1Q8N9T2 125 aa12.82□□□□□ -0.36
SIN3B-211ENST00000601141 UBE2BP63146 152 aa12.8□□□□□ -0.36
SIN3B-211ENST00000601141 RPL24P83731 157 aaKnown RBP12.8□□□□□ -0.36
SIN3B-211ENST00000601141 ADAMTSL4-AS1Q5T5F5 129 aa12.8□□□□□ -0.36
SIN3B-211ENST00000601141 TIMM17BO60830 172 aa12.79□□□□□ -0.36
SIN3B-211ENST00000601141 MRPL55Q7Z7F7 128 aaKnown RBP12.79□□□□□ -0.36
SIN3B-211ENST00000601141 BOD1L2Q8IYS8 172 aa12.79□□□□□ -0.36
SIN3B-211ENST00000601141 MIEN1Q9BRT3 115 aa12.79□□□□□ -0.36
SIN3B-211ENST00000601141 KRTAP4-5Q9BYR2 181 aa12.79□□□□□ -0.36
SIN3B-211ENST00000601141 IGLV5-37A0A075B6J1 123 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 VPREB1P12018 145 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 LBHQ53QV2 105 aaPredicted RBP12.78□□□□□ -0.36
SIN3B-211ENST00000601141 PYY3Q5JQD4 70 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 VAMP8Q9BV40 100 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 TP73-AS1Q9UF72 201 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 NPC2P61916 151 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 Q8NDZ9 215 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 LITAFQ99732 161 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 PAM16Q9Y3D7 125 aa12.78□□□□□ -0.36
SIN3B-211ENST00000601141 GAGE10A6NGK3 116 aa12.77□□□□□ -0.37
SIN3B-211ENST00000601141 VPS13BQ7Z7G8 4022 aa12.76□□□□□ -0.37
SIN3B-211ENST00000601141 SPATA45Q537H7 98 aa12.76□□□□□ -0.37
SIN3B-211ENST00000601141 TMEM238C9JI98 176 aa12.75□□□□□ -0.37
SIN3B-211ENST00000601141 PRR3P79522 188 aaKnown RBP12.75□□□□□ -0.37
SIN3B-211ENST00000601141 LINC00167Q96N53 147 aa12.75□□□□□ -0.37
SIN3B-211ENST00000601141 KRTAP11-1Q8IUC1 163 aa12.74□□□□□ -0.37
SIN3B-211ENST00000601141 PSORS1C2Q9UIG4 136 aa12.74□□□□□ -0.37
SIN3B-211ENST00000601141 SRRM2Q9UQ35 2752 aaKnown RBP12.74□□□□□ -0.37
SIN3B-211ENST00000601141 RPL37AP8A6NKH3 93 aa12.73□□□□□ -0.37
SIN3B-211ENST00000601141 KRTAP10-4P60372 401 aaPredicted RBP12.73□□□□□ -0.37
SIN3B-211ENST00000601141 LOC107984156A0A0G2JMH3 177 aa12.72□□□□□ -0.37
SIN3B-211ENST00000601141 NCR3O14931 201 aa12.72□□□□□ -0.37
SIN3B-211ENST00000601141 SOSTDC1Q6X4U4 206 aa12.72□□□□□ -0.37
SIN3B-211ENST00000601141 ARL17AQ8IVW1 177 aa12.72□□□□□ -0.37
SIN3B-211ENST00000601141 COX8AP10176 69 aa12.72□□□□□ -0.37
SIN3B-211ENST00000601141 LINC00308Q8TCZ7 52 aa12.72□□□□□ -0.37
SIN3B-211ENST00000601141 EIF4EBP3O60516 100 aaPredicted RBP12.71□□□□□ -0.38
SIN3B-211ENST00000601141 SPANXDQ9BXN6 97 aa12.71□□□□□ -0.38
SIN3B-211ENST00000601141 SPANXCQ9NY87 97 aa12.71□□□□□ -0.38
SIN3B-211ENST00000601141 IGKV2-28A0A075B6P5 120 aa12.7□□□□□ -0.38
SIN3B-211ENST00000601141 IGKV2D-28P01615 120 aa12.7□□□□□ -0.38
SIN3B-211ENST00000601141 C1orf137Q5JT78 98 aa12.7□□□□□ -0.38
SIN3B-211ENST00000601141 C14orf144Q96I85 54 aa12.7□□□□□ -0.38
SIN3B-211ENST00000601141 M0R378 163 aa12.69□□□□□ -0.38
SIN3B-211ENST00000601141 ABCA13Q86UQ4 5058 aa12.67□□□□□ -0.38
SIN3B-211ENST00000601141 NDUFC2O95298 119 aa12.66□□□□□ -0.38
SIN3B-211ENST00000601141 Q6ZVH6 145 aa12.66□□□□□ -0.38
SIN3B-211ENST00000601141 COPS9Q8WXC6 57 aa12.66□□□□□ -0.38
SIN3B-211ENST00000601141 SPANXB1Q9NS25 103 aaPredicted RBP12.66□□□□□ -0.38
SIN3B-211ENST00000601141 IGLV1-50A0A075B6I6 118 aa12.65□□□□□ -0.38
SIN3B-211ENST00000601141 DLEU1O43261 78 aa12.65□□□□□ -0.38
SIN3B-211ENST00000601141 INAFM2P0DMQ5 153 aa12.65□□□□□ -0.38
SIN3B-211ENST00000601141 SRSF9Q13242 221 aaKnown RBP eCLIP12.65□□□□□ -0.38
SIN3B-211ENST00000601141 IFITM1P13164 125 aa12.64□□□□□ -0.39
SIN3B-211ENST00000601141 HNRNPA3P51991 378 aaKnown RBP12.64□□□□□ -0.39
SIN3B-211ENST00000601141 SLC25A34Q6PIV7 304 aa12.64□□□□□ -0.39
SIN3B-211ENST00000601141 TRBV10-2A0A0K0K1G8 114 aa12.63□□□□□ -0.39
SIN3B-211ENST00000601141 S100A12P80511 92 aa12.62□□□□□ -0.39
SIN3B-211ENST00000601141 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
SIN3B-211ENST00000601141 TRBV10-3A0A0K0K1G6 114 aa12.6□□□□□ -0.39
SIN3B-211ENST00000601141 IGLV7-43P04211 117 aa12.6□□□□□ -0.39
SIN3B-211ENST00000601141 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
SIN3B-211ENST00000601141 DDTP30046 118 aa12.59□□□□□ -0.39
SIN3B-211ENST00000601141 BCE1O60756 84 aa12.59□□□□□ -0.39
SIN3B-211ENST00000601141 REG3GQ6UW15 175 aa12.59□□□□□ -0.39
SIN3B-211ENST00000601141 TMEM126AQ9H061 195 aa12.59□□□□□ -0.39
SIN3B-211ENST00000601141 HIST1H4GQ99525 98 aa12.58□□□□□ -0.4
SIN3B-211ENST00000601141 PPDPFQ9H3Y8 114 aa12.58□□□□□ -0.4
SIN3B-211ENST00000601141 LOC105371267A0A1B0GV96 52 aa12.57□□□□□ -0.4
SIN3B-211ENST00000601141 LINC00518Q8N0U6 118 aa12.56□□□□□ -0.4
SIN3B-211ENST00000601141 OR13C6PQ8NH95 151 aa12.56□□□□□ -0.4
SIN3B-211ENST00000601141 PCLOQ9Y6V0 5065 aa12.55□□□□□ -0.4
SIN3B-211ENST00000601141 PRYO14603 147 aa12.55□□□□□ -0.4
SIN3B-211ENST00000601141 SMIM6P0DI80 62 aa12.55□□□□□ -0.4
SIN3B-211ENST00000601141 SPINK6Q6UWN8 80 aa12.55□□□□□ -0.4
SIN3B-211ENST00000601141 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
SIN3B-211ENST00000601141 IGLV6-57P01721 117 aa12.54□□□□□ -0.4
SIN3B-211ENST00000601141 UBE2AP49459 152 aa12.54□□□□□ -0.4
SIN3B-211ENST00000601141 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
SIN3B-211ENST00000601141 KCNQ1DNQ9H478 68 aa12.54□□□□□ -0.4
SIN3B-211ENST00000601141 FAM19A1Q7Z5A9 133 aa12.53□□□□□ -0.4
SIN3B-211ENST00000601141 ZNF861PO60384 105 aa12.52□□□□□ -0.41
SIN3B-211ENST00000601141 RPL28P46779 137 aaKnown RBP12.52□□□□□ -0.41
SIN3B-211ENST00000601141 LINC00337Q8N6G1 96 aa12.52□□□□□ -0.41
SIN3B-211ENST00000601141 PKHD1L1Q86WI1 4243 aa12.51□□□□□ -0.41
SIN3B-211ENST00000601141 TRAV23DV6A0A075B6W5 121 aa12.5□□□□□ -0.41
SIN3B-211ENST00000601141 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
SIN3B-211ENST00000601141 UQCR10Q9UDW1 63 aa12.5□□□□□ -0.41
SIN3B-211ENST00000601141 A4D1N5 150 aa12.49□□□□□ -0.41
SIN3B-211ENST00000601141 PRLHP81277 87 aa12.49□□□□□ -0.41
SIN3B-211ENST00000601141 ETDCA0A1B0GVM5 59 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms