RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 PAM16Q9Y3D7 125 aa7.41□□□□□ -1.22
CHMP2A-207ENST00000600804 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 J3QL48 77 aa7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 S100A12P80511 92 aa7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 RPL18AQ02543 176 aaKnown RBP7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 LINC00528Q8N1L1 170 aa7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 LITAFQ99732 161 aa7.4□□□□□ -1.22
CHMP2A-207ENST00000600804 SMIM13P0DJ93 91 aa7.39□□□□□ -1.23
CHMP2A-207ENST00000600804 PFN2P35080 140 aa7.39□□□□□ -1.23
CHMP2A-207ENST00000600804 LINC00158P58513 81 aa7.39□□□□□ -1.23
CHMP2A-207ENST00000600804 GAGE2BQ13066 116 aa7.39□□□□□ -1.23
CHMP2A-207ENST00000600804 PPDPFQ9H3Y8 114 aa7.39□□□□□ -1.23
CHMP2A-207ENST00000600804 GAGE2EQ4V326 116 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 C9orf129Q5T035 196 aaKnown RBP7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 SCGB1D4Q6XE38 83 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 Q6ZVH6 145 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 PLAC8Q9NZF1 115 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 FAM30AQ9NZY2 134 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 GAGE2DQ9UEU5 116 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 PLA2G2DQ9UNK4 145 aa7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.38□□□□□ -1.23
CHMP2A-207ENST00000600804 IGKV2-24A0A0C4DH68 120 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 TMEM238C9JI98 176 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 PANO1I0J062 215 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 CHTF8P0CG12 524 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 SLC25A34Q6PIV7 304 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 MIR7-3HGQ8N6C7 128 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 SPANXDQ9BXN6 97 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 SPANXCQ9NY87 97 aa7.37□□□□□ -1.23
CHMP2A-207ENST00000600804 ADAMTSL4-AS1Q5T5F5 129 aa7.36□□□□□ -1.23
CHMP2A-207ENST00000600804 A0A087WYN8 130 aa7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 COPS9Q8WXC6 57 aa7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 C14orf144Q96I85 54 aa7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 XAGE1AQ9HD64 81 aa7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 HIGD1BQ9P298 99 aa7.35□□□□□ -1.23
CHMP2A-207ENST00000600804 IGLV5-37A0A075B6J1 123 aa7.34□□□□□ -1.23
CHMP2A-207ENST00000600804 A0A0U1RRA0 63 aa7.34□□□□□ -1.23
CHMP2A-207ENST00000600804 A0A1W2PNN7 141 aa7.34□□□□□ -1.23
CHMP2A-207ENST00000600804 IFITM1P13164 125 aa7.34□□□□□ -1.23
CHMP2A-207ENST00000600804 TP73-AS1Q9UF72 201 aa7.34□□□□□ -1.23
CHMP2A-207ENST00000600804 RPL24P83731 157 aaKnown RBP7.33□□□□□ -1.24
CHMP2A-207ENST00000600804 SCXQ7RTU7 201 aa7.33□□□□□ -1.24
CHMP2A-207ENST00000600804 CIRBP-AS1Q8TBR5 109 aa7.33□□□□□ -1.24
CHMP2A-207ENST00000600804 UQCR10Q9UDW1 63 aa7.33□□□□□ -1.24
CHMP2A-207ENST00000600804 NDUFC2O95298 119 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 VPREB1P12018 145 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 DAND5Q8N907 189 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 LINC00308Q8TCZ7 52 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 C12orf57Q99622 126 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 MIEN1Q9BRT3 115 aa7.32□□□□□ -1.24
CHMP2A-207ENST00000600804 SERTAD4-AS1Q5TG53 156 aa7.31□□□□□ -1.24
CHMP2A-207ENST00000600804 SOSTDC1Q6X4U4 206 aa7.31□□□□□ -1.24
CHMP2A-207ENST00000600804 C2orf91Q6ZV80 131 aa7.31□□□□□ -1.24
CHMP2A-207ENST00000600804 LINC00518Q8N0U6 118 aa7.31□□□□□ -1.24
CHMP2A-207ENST00000600804 DPH3Q96FX2 82 aa7.31□□□□□ -1.24
CHMP2A-207ENST00000600804 FAM168BA1KXE4 195 aa7.3□□□□□ -1.24
CHMP2A-207ENST00000600804 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
CHMP2A-207ENST00000600804 TRBV10-2A0A0K0K1G8 114 aa7.29□□□□□ -1.24
CHMP2A-207ENST00000600804 SRSF9Q13242 221 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHMP2A-207ENST00000600804 TAL2Q16559 108 aa7.29□□□□□ -1.24
CHMP2A-207ENST00000600804 Q8NDZ9 215 aa7.29□□□□□ -1.24
CHMP2A-207ENST00000600804 C22orf24Q9Y442 160 aa7.29□□□□□ -1.24
CHMP2A-207ENST00000600804 EIF4EBP3O60516 100 aaPredicted RBP7.28□□□□□ -1.24
CHMP2A-207ENST00000600804 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
CHMP2A-207ENST00000600804 LBHQ53QV2 105 aaPredicted RBP7.28□□□□□ -1.24
CHMP2A-207ENST00000600804 FAM19A5Q7Z5A7 132 aaPredicted RBP7.28□□□□□ -1.24
CHMP2A-207ENST00000600804 M0QXV9 152 aa7.27□□□□□ -1.25
CHMP2A-207ENST00000600804 M0R378 163 aa7.27□□□□□ -1.25
CHMP2A-207ENST00000600804 MRPL55Q7Z7F7 128 aaKnown RBP7.27□□□□□ -1.25
CHMP2A-207ENST00000600804 MUSTN1Q8IVN3 82 aa7.27□□□□□ -1.25
CHMP2A-207ENST00000600804 NKAPP1Q8N9T2 125 aa7.27□□□□□ -1.25
CHMP2A-207ENST00000600804 LRP2P98164 4655 aa7.26□□□□□ -1.25
CHMP2A-207ENST00000600804 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
CHMP2A-207ENST00000600804 TSTD3H0UI37 97 aa7.25□□□□□ -1.25
CHMP2A-207ENST00000600804 NPC2P61916 151 aa7.25□□□□□ -1.25
CHMP2A-207ENST00000600804 PHF5AQ7RTV0 110 aaKnown RBP7.25□□□□□ -1.25
CHMP2A-207ENST00000600804 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
CHMP2A-207ENST00000600804 TNXBP22105 4242 aa7.25□□□□□ -1.25
CHMP2A-207ENST00000600804 GHRHP01286 108 aa7.24□□□□□ -1.25
CHMP2A-207ENST00000600804 PLA2G1BP04054 148 aaKnown RBP7.24□□□□□ -1.25
CHMP2A-207ENST00000600804 HNRNPA3P51991 378 aaKnown RBP7.24□□□□□ -1.25
CHMP2A-207ENST00000600804 HSD52Q0P140 79 aa7.24□□□□□ -1.25
CHMP2A-207ENST00000600804 LINC00167Q96N53 147 aa7.24□□□□□ -1.25
CHMP2A-207ENST00000600804 PRO1933Q9H354 126 aa7.24□□□□□ -1.25
CHMP2A-207ENST00000600804 IGLV1-50A0A075B6I6 118 aa7.23□□□□□ -1.25
CHMP2A-207ENST00000600804 IGKV2-28A0A075B6P5 120 aa7.23□□□□□ -1.25
CHMP2A-207ENST00000600804 IGKV2D-28P01615 120 aa7.23□□□□□ -1.25
CHMP2A-207ENST00000600804 CEND1Q8N111 149 aa7.23□□□□□ -1.25
CHMP2A-207ENST00000600804 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
CHMP2A-207ENST00000600804 PRR3P79522 188 aaKnown RBP7.22□□□□□ -1.25
CHMP2A-207ENST00000600804 CBY1Q9Y3M2 126 aa7.22□□□□□ -1.25
CHMP2A-207ENST00000600804 A4D1N5 150 aa7.21□□□□□ -1.26
CHMP2A-207ENST00000600804 TMEM126AQ9H061 195 aa7.21□□□□□ -1.26
CHMP2A-207ENST00000600804 KCNQ1DNQ9H478 68 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms