RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 SPACA4Q8TDM5 124 aa8.66□□□□□ -1.02
PRKD2-208ENST00000597390 C14orf144Q96I85 54 aa8.66□□□□□ -1.02
PRKD2-208ENST00000597390 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
PRKD2-208ENST00000597390 LINC00587B1AMM8 73 aa8.65□□□□□ -1.02
PRKD2-208ENST00000597390 DLEU1O43261 78 aa8.65□□□□□ -1.02
PRKD2-208ENST00000597390 TIMM17BO60830 172 aa8.65□□□□□ -1.02
PRKD2-208ENST00000597390 LINC00158P58513 81 aa8.65□□□□□ -1.02
PRKD2-208ENST00000597390 SND1-IT1Q9HBX3 110 aa8.65□□□□□ -1.02
PRKD2-208ENST00000597390 SRRM2Q9UQ35 2752 aaKnown RBP8.65□□□□□ -1.02
PRKD2-208ENST00000597390 XAGE1AQ9HD64 81 aa8.64□□□□□ -1.03
PRKD2-208ENST00000597390 LINC00474Q9P2X8 69 aa8.64□□□□□ -1.03
PRKD2-208ENST00000597390 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
PRKD2-208ENST00000597390 DAND5Q8N907 189 aa8.63□□□□□ -1.03
PRKD2-208ENST00000597390 S100A12P80511 92 aa8.62□□□□□ -1.03
PRKD2-208ENST00000597390 SCGB1D4Q6XE38 83 aa8.62□□□□□ -1.03
PRKD2-208ENST00000597390 SCXQ7RTU7 201 aa8.62□□□□□ -1.03
PRKD2-208ENST00000597390 KRTAP7-1Q8IUC3 87 aa8.62□□□□□ -1.03
PRKD2-208ENST00000597390 A0A1W2PNN7 141 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 FAM168BA1KXE4 195 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 EIF4EBP3O60516 100 aaPredicted RBP8.61□□□□□ -1.03
PRKD2-208ENST00000597390 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
PRKD2-208ENST00000597390 LINC00528Q8N1L1 170 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 MYCBP2O75592 4640 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 A0A087WYN8 130 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 LOC107984156A0A0G2JMH3 177 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 SLC25A34Q6PIV7 304 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 ARL17AQ8IVW1 177 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 Q8NDZ9 215 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
PRKD2-208ENST00000597390 SOSTDC1Q6X4U4 206 aa8.6□□□□□ -1.03
PRKD2-208ENST00000597390 C2orf91Q6ZV80 131 aa8.6□□□□□ -1.03
PRKD2-208ENST00000597390 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
PRKD2-208ENST00000597390 C12orf57Q99622 126 aa8.6□□□□□ -1.03
PRKD2-208ENST00000597390 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
PRKD2-208ENST00000597390 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
PRKD2-208ENST00000597390 TMEM238C9JI98 176 aa8.59□□□□□ -1.03
PRKD2-208ENST00000597390 SERTAD4-AS1Q5TG53 156 aa8.59□□□□□ -1.03
PRKD2-208ENST00000597390 PLA2G2DQ9UNK4 145 aa8.59□□□□□ -1.03
PRKD2-208ENST00000597390 LINC00518Q8N0U6 118 aa8.58□□□□□ -1.04
PRKD2-208ENST00000597390 LINC00308Q8TCZ7 52 aa8.58□□□□□ -1.04
PRKD2-208ENST00000597390 DPH3Q96FX2 82 aa8.58□□□□□ -1.04
PRKD2-208ENST00000597390 SPANXB1Q9NS25 103 aaPredicted RBP8.58□□□□□ -1.04
PRKD2-208ENST00000597390 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
PRKD2-208ENST00000597390 FLG2Q5D862 2391 aaPredicted RBP8.56□□□□□ -1.04
PRKD2-208ENST00000597390 VPREB1P12018 145 aa8.56□□□□□ -1.04
PRKD2-208ENST00000597390 NPC2P61916 151 aa8.56□□□□□ -1.04
PRKD2-208ENST00000597390 Q6ZVH6 145 aa8.56□□□□□ -1.04
PRKD2-208ENST00000597390 FAM19A5Q7Z5A7 132 aaPredicted RBP8.56□□□□□ -1.04
PRKD2-208ENST00000597390 PRO1933Q9H354 126 aa8.56□□□□□ -1.04
PRKD2-208ENST00000597390 IGLV5-37A0A075B6J1 123 aa8.55□□□□□ -1.04
PRKD2-208ENST00000597390 PPDPFQ9H3Y8 114 aa8.55□□□□□ -1.04
PRKD2-208ENST00000597390 UQCR10Q9UDW1 63 aa8.55□□□□□ -1.04
PRKD2-208ENST00000597390 IFITM1P13164 125 aa8.53□□□□□ -1.04
PRKD2-208ENST00000597390 PRR3P79522 188 aaKnown RBP8.53□□□□□ -1.04
PRKD2-208ENST00000597390 MUSTN1Q8IVN3 82 aa8.53□□□□□ -1.04
PRKD2-208ENST00000597390 MIEN1Q9BRT3 115 aa8.53□□□□□ -1.04
PRKD2-208ENST00000597390 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
PRKD2-208ENST00000597390 M0QXV9 152 aa8.52□□□□□ -1.05
PRKD2-208ENST00000597390 RPL24P83731 157 aaKnown RBP8.52□□□□□ -1.05
PRKD2-208ENST00000597390 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
PRKD2-208ENST00000597390 PHF5AQ7RTV0 110 aaKnown RBP8.52□□□□□ -1.05
PRKD2-208ENST00000597390 NDUFC2O95298 119 aa8.51□□□□□ -1.05
PRKD2-208ENST00000597390 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
PRKD2-208ENST00000597390 HIST1H4GQ99525 98 aa8.51□□□□□ -1.05
PRKD2-208ENST00000597390 PKHD1L1Q86WI1 4243 aa8.5□□□□□ -1.05
PRKD2-208ENST00000597390 IGKV2-28A0A075B6P5 120 aa8.49□□□□□ -1.05
PRKD2-208ENST00000597390 IGKV2D-28P01615 120 aa8.49□□□□□ -1.05
PRKD2-208ENST00000597390 MRPL55Q7Z7F7 128 aaKnown RBP8.49□□□□□ -1.05
PRKD2-208ENST00000597390 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
PRKD2-208ENST00000597390 NKAPP1Q8N9T2 125 aa8.49□□□□□ -1.05
PRKD2-208ENST00000597390 C7orf33Q8WU49 177 aa8.49□□□□□ -1.05
PRKD2-208ENST00000597390 COPS9Q8WXC6 57 aa8.49□□□□□ -1.05
PRKD2-208ENST00000597390 NCR3O14931 201 aa8.48□□□□□ -1.05
PRKD2-208ENST00000597390 TAL2Q16559 108 aa8.48□□□□□ -1.05
PRKD2-208ENST00000597390 LINC00167Q96N53 147 aa8.48□□□□□ -1.05
PRKD2-208ENST00000597390 TRBV10-2A0A0K0K1G8 114 aa8.48□□□□□ -1.05
PRKD2-208ENST00000597390 KRTAP29-1A8MX34 341 aaPredicted RBP8.48□□□□□ -1.05
PRKD2-208ENST00000597390 J3QL48 77 aa8.48□□□□□ -1.05
PRKD2-208ENST00000597390 M0R378 163 aa8.48□□□□□ -1.05
PRKD2-208ENST00000597390 RPL37AP61513 92 aaKnown RBP8.48□□□□□ -1.05
PRKD2-208ENST00000597390 LBHQ53QV2 105 aaPredicted RBP8.48□□□□□ -1.05
PRKD2-208ENST00000597390 A4D1N5 150 aa8.47□□□□□ -1.05
PRKD2-208ENST00000597390 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
PRKD2-208ENST00000597390 TSTD3H0UI37 97 aa8.47□□□□□ -1.05
PRKD2-208ENST00000597390 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
PRKD2-208ENST00000597390 HSD52Q0P140 79 aa8.46□□□□□ -1.06
PRKD2-208ENST00000597390 CEND1Q8N111 149 aa8.46□□□□□ -1.06
PRKD2-208ENST00000597390 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
PRKD2-208ENST00000597390 FAT3Q8TDW7 4589 aa8.45□□□□□ -1.06
PRKD2-208ENST00000597390 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
PRKD2-208ENST00000597390 RPL37AP8A6NKH3 93 aa8.45□□□□□ -1.06
PRKD2-208ENST00000597390 LINC00337Q8N6G1 96 aa8.45□□□□□ -1.06
PRKD2-208ENST00000597390 LRP1Q07954 4544 aaKnown RBP8.44□□□□□ -1.06
PRKD2-208ENST00000597390 IGLV6-57P01721 117 aa8.44□□□□□ -1.06
PRKD2-208ENST00000597390 TRBV10-3A0A0K0K1G6 114 aa8.43□□□□□ -1.06
PRKD2-208ENST00000597390 FXYD2P54710 66 aa8.43□□□□□ -1.06
PRKD2-208ENST00000597390 UBE2BP63146 152 aa8.42□□□□□ -1.06
PRKD2-208ENST00000597390 CTAG1AP78358 180 aa8.42□□□□□ -1.06
PRKD2-208ENST00000597390 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
PRKD2-208ENST00000597390 OXTP01178 125 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms