RNA–Protein interactions for RNA: ENST00000596647.1

PDE4C-209, Transcript of phosphodiesterase 4C, humanhuman

TSL 3

Gene PDE4C, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-209ENST00000596647 HIST1H2BNQ99877 126 aa8.77□□□□□ -1.01
PDE4C-209ENST00000596647 HIST1H2BMQ99879 126 aa8.77□□□□□ -1.01
PDE4C-209ENST00000596647 LINC00614P0C842 121 aa8.76□□□□□ -1.01
PDE4C-209ENST00000596647 PRLHP81277 87 aa8.75□□□□□ -1.01
PDE4C-209ENST00000596647 CST9LQ9H4G1 147 aa8.75□□□□□ -1.01
PDE4C-209ENST00000596647 LINC01549A6NIU2 74 aa8.74□□□□□ -1.01
PDE4C-209ENST00000596647 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
PDE4C-209ENST00000596647 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
PDE4C-209ENST00000596647 TMEM126AQ9H061 195 aa8.74□□□□□ -1.01
PDE4C-209ENST00000596647 LINC01546A6NGU7 62 aa8.73□□□□□ -1.01
PDE4C-209ENST00000596647 HSBP1O75506 76 aa8.73□□□□□ -1.01
PDE4C-209ENST00000596647 ATP5LO75964 103 aa8.73□□□□□ -1.01
PDE4C-209ENST00000596647 NDUFA6P56556 154 aa8.73□□□□□ -1.01
PDE4C-209ENST00000596647 URB1-AS1Q96HZ7 61 aa8.73□□□□□ -1.01
PDE4C-209ENST00000596647 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
PDE4C-209ENST00000596647 TMEM238C9JI98 176 aa8.72□□□□□ -1.01
PDE4C-209ENST00000596647 SERF1AO75920 110 aa8.72□□□□□ -1.01
PDE4C-209ENST00000596647 VPREB1P12018 145 aa8.72□□□□□ -1.01
PDE4C-209ENST00000596647 FAM19A1Q7Z5A9 133 aa8.72□□□□□ -1.01
PDE4C-209ENST00000596647 PLEKHB2Q96CS7 222 aa8.72□□□□□ -1.01
PDE4C-209ENST00000596647 M0R378 163 aa8.71□□□□□ -1.02
PDE4C-209ENST00000596647 C3orf22Q8N5N4 141 aa8.71□□□□□ -1.02
PDE4C-209ENST00000596647 IGLV5-39A0A0G2JS06 123 aa8.7□□□□□ -1.02
PDE4C-209ENST00000596647 S100A6P06703 90 aa8.7□□□□□ -1.02
PDE4C-209ENST00000596647 PFN2P35080 140 aa8.7□□□□□ -1.02
PDE4C-209ENST00000596647 PMVKQ15126 192 aa8.7□□□□□ -1.02
PDE4C-209ENST00000596647 SND1-IT1Q9HBX3 110 aa8.7□□□□□ -1.02
PDE4C-209ENST00000596647 H3BRM9 83 aa8.69□□□□□ -1.02
PDE4C-209ENST00000596647 HBDP02042 147 aa8.69□□□□□ -1.02
PDE4C-209ENST00000596647 PMCHL1Q16048 86 aa8.69□□□□□ -1.02
PDE4C-209ENST00000596647 LINC00310P59036 64 aa8.68□□□□□ -1.02
PDE4C-209ENST00000596647 SPAG11AQ6PDA7 123 aa8.68□□□□□ -1.02
PDE4C-209ENST00000596647 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
PDE4C-209ENST00000596647 FAM19A2Q8N3H0 131 aa8.68□□□□□ -1.02
PDE4C-209ENST00000596647 Q8NDZ9 215 aa8.68□□□□□ -1.02
PDE4C-209ENST00000596647 RPL24P83731 157 aaKnown RBP8.67□□□□□ -1.02
PDE4C-209ENST00000596647 COA6Q5JTJ3 125 aaKnown RBP8.67□□□□□ -1.02
PDE4C-209ENST00000596647 ERG28Q9UKR5 140 aa8.67□□□□□ -1.02
PDE4C-209ENST00000596647 IGLC3P0DOY3 106 aa8.66□□□□□ -1.02
PDE4C-209ENST00000596647 COX17Q14061 63 aa8.66□□□□□ -1.02
PDE4C-209ENST00000596647 TMA7Q9Y2S6 64 aaKnown RBP8.66□□□□□ -1.02
PDE4C-209ENST00000596647 A0A096LNJ9 63 aa8.65□□□□□ -1.02
PDE4C-209ENST00000596647 KRTAP13-3Q3SY46 172 aa8.65□□□□□ -1.02
PDE4C-209ENST00000596647 SPRR4Q96PI1 79 aa8.65□□□□□ -1.02
PDE4C-209ENST00000596647 LEPROTL1O95214 131 aa8.64□□□□□ -1.03
PDE4C-209ENST00000596647 ASB16-AS1Q495Z4 193 aa8.64□□□□□ -1.03
PDE4C-209ENST00000596647 HIGD2AQ9BW72 106 aa8.64□□□□□ -1.03
PDE4C-209ENST00000596647 FABP4P15090 132 aa8.63□□□□□ -1.03
PDE4C-209ENST00000596647 ZNF22P17026 224 aaPredicted RBP8.63□□□□□ -1.03
PDE4C-209ENST00000596647 S100A2P29034 98 aa8.63□□□□□ -1.03
PDE4C-209ENST00000596647 SNRPEP62304 92 aaKnown RBP8.63□□□□□ -1.03
PDE4C-209ENST00000596647 LINC00337Q8N6G1 96 aa8.62□□□□□ -1.03
PDE4C-209ENST00000596647 HSPB8Q9UJY1 196 aa8.62□□□□□ -1.03
PDE4C-209ENST00000596647 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
PDE4C-209ENST00000596647 FSIP2Q5CZC0 6907 aa8.6□□□□□ -1.03
PDE4C-209ENST00000596647 SFTA2Q6UW10 78 aa8.6□□□□□ -1.03
PDE4C-209ENST00000596647 HIST3H2BBQ8N257 126 aa8.6□□□□□ -1.03
PDE4C-209ENST00000596647 IFI27L1Q96BM0 104 aa8.6□□□□□ -1.03
PDE4C-209ENST00000596647 ZNF625Q96I27 306 aaPredicted RBP8.6□□□□□ -1.03
PDE4C-209ENST00000596647 ZNF706Q9Y5V0 76 aaPredicted RBP8.6□□□□□ -1.03
PDE4C-209ENST00000596647 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
PDE4C-209ENST00000596647 LINC01547P58512 204 aaPredicted RBP8.59□□□□□ -1.03
PDE4C-209ENST00000596647 C4orf48Q5BLP8 95 aa8.59□□□□□ -1.03
PDE4C-209ENST00000596647 Q8NBF4 154 aa8.59□□□□□ -1.03
PDE4C-209ENST00000596647 KRTAP4-1Q9BYQ7 146 aa8.59□□□□□ -1.03
PDE4C-209ENST00000596647 MAP1LC3CQ9BXW4 147 aa8.58□□□□□ -1.04
PDE4C-209ENST00000596647 H0Y8G0 127 aa8.57□□□□□ -1.04
PDE4C-209ENST00000596647 DAND5Q8N907 189 aa8.57□□□□□ -1.04
PDE4C-209ENST00000596647 SPINK1P00995 79 aa8.56□□□□□ -1.04
PDE4C-209ENST00000596647 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
PDE4C-209ENST00000596647 HIST1H2BLQ99880 126 aa8.56□□□□□ -1.04
PDE4C-209ENST00000596647 C11orf86A6NJI1 115 aa8.55□□□□□ -1.04
PDE4C-209ENST00000596647 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
PDE4C-209ENST00000596647 CHTOPQ9Y3Y2 248 aaKnown RBP8.55□□□□□ -1.04
PDE4C-209ENST00000596647 PRYO14603 147 aa8.54□□□□□ -1.04
PDE4C-209ENST00000596647 SPRR1AP35321 89 aa8.54□□□□□ -1.04
PDE4C-209ENST00000596647 KRTDAPP60985 99 aa8.54□□□□□ -1.04
PDE4C-209ENST00000596647 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
PDE4C-209ENST00000596647 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
PDE4C-209ENST00000596647 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
PDE4C-209ENST00000596647 LINC00158P58513 81 aa8.53□□□□□ -1.04
PDE4C-209ENST00000596647 KCNQ1DNQ9H478 68 aa8.53□□□□□ -1.04
PDE4C-209ENST00000596647 SYS1-DBNDD2H3BUS1 97 aa8.52□□□□□ -1.05
PDE4C-209ENST00000596647 C3orf79P0CE67 100 aa8.52□□□□□ -1.05
PDE4C-209ENST00000596647 PET117Q6UWS5 81 aa8.52□□□□□ -1.05
PDE4C-209ENST00000596647 RPS29P62273 56 aaKnown RBP8.51□□□□□ -1.05
PDE4C-209ENST00000596647 SMCR5Q8TEV8 140 aa8.51□□□□□ -1.05
PDE4C-209ENST00000596647 CRCT1Q9UGL9 99 aa8.5□□□□□ -1.05
PDE4C-209ENST00000596647 A0A0U1RRA0 63 aa8.49□□□□□ -1.05
PDE4C-209ENST00000596647 C20orf202A1L168 122 aa8.49□□□□□ -1.05
PDE4C-209ENST00000596647 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
PDE4C-209ENST00000596647 Q8N377 158 aa8.49□□□□□ -1.05
PDE4C-209ENST00000596647 NDUFA12Q9UI09 145 aa8.49□□□□□ -1.05
PDE4C-209ENST00000596647 ETDCA0A1B0GVM5 59 aa8.48□□□□□ -1.05
PDE4C-209ENST00000596647 NCR3O14931 201 aa8.48□□□□□ -1.05
PDE4C-209ENST00000596647 PMCHL2Q9BQD1 86 aa8.48□□□□□ -1.05
PDE4C-209ENST00000596647 TMEM223A0PJW6 202 aa8.47□□□□□ -1.05
PDE4C-209ENST00000596647 DPM2O94777 84 aa8.47□□□□□ -1.05
PDE4C-209ENST00000596647 SMIM13P0DJ93 91 aa8.47□□□□□ -1.05
PDE4C-209ENST00000596647 PLNP26678 52 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms