RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 FAM168BA1KXE4 195 aa6.63□□□□□ -1.35
LIG1-210ENST00000596332 E9PLD3 99 aa6.63□□□□□ -1.35
LIG1-210ENST00000596332 MAJINQ3KP22 176 aa6.63□□□□□ -1.35
LIG1-210ENST00000596332 SLC25A34Q6PIV7 304 aa6.63□□□□□ -1.35
LIG1-210ENST00000596332 Q8N1X5 172 aa6.63□□□□□ -1.35
LIG1-210ENST00000596332 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
LIG1-210ENST00000596332 ANKRD39Q53RE8 183 aa6.62□□□□□ -1.35
LIG1-210ENST00000596332 KRTAP11-1Q8IUC1 163 aa6.62□□□□□ -1.35
LIG1-210ENST00000596332 ATOH7Q8N100 152 aa6.62□□□□□ -1.35
LIG1-210ENST00000596332 Q8NDZ9 215 aa6.62□□□□□ -1.35
LIG1-210ENST00000596332 CBY1Q9Y3M2 126 aa6.62□□□□□ -1.35
LIG1-210ENST00000596332 ABCA13Q86UQ4 5058 aa6.62□□□□□ -1.35
LIG1-210ENST00000596332 SRRM2Q9UQ35 2752 aaKnown RBP6.62□□□□□ -1.35
LIG1-210ENST00000596332 J3QQQ9 107 aa6.61□□□□□ -1.35
LIG1-210ENST00000596332 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
LIG1-210ENST00000596332 TTTY13Q9BZ97 58 aa6.61□□□□□ -1.35
LIG1-210ENST00000596332 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
LIG1-210ENST00000596332 NDUFA12Q9UI09 145 aa6.61□□□□□ -1.35
LIG1-210ENST00000596332 ERG28Q9UKR5 140 aa6.61□□□□□ -1.35
LIG1-210ENST00000596332 SERTAD4-AS1Q5TG53 156 aa6.6□□□□□ -1.35
LIG1-210ENST00000596332 PLEKHB2Q96CS7 222 aa6.6□□□□□ -1.35
LIG1-210ENST00000596332 XAGE1AQ9HD64 81 aa6.6□□□□□ -1.35
LIG1-210ENST00000596332 LINC00474Q9P2X8 69 aa6.6□□□□□ -1.35
LIG1-210ENST00000596332 HINT1P49773 126 aaPredicted RBP6.59□□□□□ -1.35
LIG1-210ENST00000596332 SMIM13P0DJ93 91 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 PFN2P35080 140 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 UBE2V1Q13404 147 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 COX17Q14061 63 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 LITAFQ99732 161 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 SND1-IT1Q9HBX3 110 aa6.58□□□□□ -1.36
LIG1-210ENST00000596332 COX8AP10176 69 aa6.57□□□□□ -1.36
LIG1-210ENST00000596332 HERVK_113P61574 105 aa6.57□□□□□ -1.36
LIG1-210ENST00000596332 HERV-K104P63124 156 aa6.57□□□□□ -1.36
LIG1-210ENST00000596332 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
LIG1-210ENST00000596332 DPH3Q96FX2 82 aa6.57□□□□□ -1.36
LIG1-210ENST00000596332 PLA2G2DQ9UNK4 145 aa6.57□□□□□ -1.36
LIG1-210ENST00000596332 PKIGQ9Y2B9 76 aa6.57□□□□□ -1.36
LIG1-210ENST00000596332 A0A0J9YXY3 114 aa6.56□□□□□ -1.36
LIG1-210ENST00000596332 A0A0U1RRA0 63 aa6.56□□□□□ -1.36
LIG1-210ENST00000596332 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
LIG1-210ENST00000596332 NMUP48645 174 aa6.56□□□□□ -1.36
LIG1-210ENST00000596332 Q5VSD8 79 aa6.56□□□□□ -1.36
LIG1-210ENST00000596332 SFTA2Q6UW10 78 aa6.56□□□□□ -1.36
LIG1-210ENST00000596332 IGLV5-37A0A075B6J1 123 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 LOC107984156A0A0G2JMH3 177 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 VPREB1P12018 145 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 BVES-AS1Q5T3Y7 98 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 SOSTDC1Q6X4U4 206 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 ARL17AQ8IVW1 177 aa6.55□□□□□ -1.36
LIG1-210ENST00000596332 A6NDN8 102 aa6.54□□□□□ -1.36
LIG1-210ENST00000596332 LGALS3P17931 250 aaKnown RBP6.54□□□□□ -1.36
LIG1-210ENST00000596332 VAMP3Q15836 100 aa6.54□□□□□ -1.36
LIG1-210ENST00000596332 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
LIG1-210ENST00000596332 MIR7-3HGQ8N6C7 128 aa6.54□□□□□ -1.36
LIG1-210ENST00000596332 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
LIG1-210ENST00000596332 LINC00158P58513 81 aa6.53□□□□□ -1.36
LIG1-210ENST00000596332 DAND5Q8N907 189 aa6.53□□□□□ -1.36
LIG1-210ENST00000596332 PCLOQ9Y6V0 5065 aa6.53□□□□□ -1.36
LIG1-210ENST00000596332 PRR3P79522 188 aaKnown RBP6.52□□□□□ -1.37
LIG1-210ENST00000596332 HSD52Q0P140 79 aa6.52□□□□□ -1.37
LIG1-210ENST00000596332 TP73-AS1Q9UF72 201 aa6.52□□□□□ -1.37
LIG1-210ENST00000596332 PKHD1L1Q86WI1 4243 aa6.52□□□□□ -1.37
LIG1-210ENST00000596332 ZNF815PA8K554 130 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 FAM229AH3BQW9 127 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 M0QXV9 152 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 TAX1BP3O14907 124 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
LIG1-210ENST00000596332 BOD1L2Q8IYS8 172 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 LINC00167Q96N53 147 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 PSORS1C2Q9UIG4 136 aa6.51□□□□□ -1.37
LIG1-210ENST00000596332 TIMM17BO60830 172 aa6.5□□□□□ -1.37
LIG1-210ENST00000596332 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
LIG1-210ENST00000596332 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
LIG1-210ENST00000596332 C7orf33Q8WU49 177 aa6.5□□□□□ -1.37
LIG1-210ENST00000596332 RPL37AP61513 92 aaKnown RBP6.49□□□□□ -1.37
LIG1-210ENST00000596332 C2orf91Q6ZV80 131 aa6.49□□□□□ -1.37
LIG1-210ENST00000596332 MRPL55Q7Z7F7 128 aaKnown RBP6.49□□□□□ -1.37
LIG1-210ENST00000596332 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
LIG1-210ENST00000596332 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
LIG1-210ENST00000596332 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
LIG1-210ENST00000596332 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
LIG1-210ENST00000596332 IGLV1-50A0A075B6I6 118 aa6.47□□□□□ -1.37
LIG1-210ENST00000596332 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
LIG1-210ENST00000596332 LINC00308Q8TCZ7 52 aa6.47□□□□□ -1.37
LIG1-210ENST00000596332 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 GAGE10A6NGK3 116 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 C9orf118A6NHY6 69 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 RPL37AP8A6NKH3 93 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 K7ERU9 68 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 IGKV2D-28P01615 120 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 TAL2Q16559 108 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 SPANXDQ9BXN6 97 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 SPANXCQ9NY87 97 aa6.46□□□□□ -1.38
LIG1-210ENST00000596332 NPC2P61916 151 aa6.45□□□□□ -1.38
LIG1-210ENST00000596332 FAT3Q8TDW7 4589 aa6.44□□□□□ -1.38
LIG1-210ENST00000596332 M0R378 163 aa6.44□□□□□ -1.38
LIG1-210ENST00000596332 NDUFC2O95298 119 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms