RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PRO2289Q9P1D8 64 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 CDKN2A-AS1Q9UH64 79 aa1.2□□□□□ -2.22
VRK3-204ENST00000593912 SYNE1Q8NF91 8797 aaKnown RBP1.2□□□□□ -2.22
VRK3-204ENST00000593912 A0A087WXM4 84 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 TRBV10-3A0A0K0K1G6 114 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 CCDC160A6NGH7 325 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 SMIM1B2RUZ4 78 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 SIX6O95475 246 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 CST9LP1Q5W188 147 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 ALKAL2Q6UX46 152 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 Q6ZRX8 168 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 SMIM15Q7Z3B0 74 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 KRTAP19-3Q7Z4W3 81 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 C9orf62Q8N4C0 152 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 TOMM5Q8N4H5 51 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 SEC22CQ9BRL7 303 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 CNFNQ9BYD5 112 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 PRO1933Q9H354 126 aa1.19□□□□□ -2.22
VRK3-204ENST00000593912 TRBV20OR9-2A0A075B6H5 130 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 D6R8Y8 96 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 PPP1R2P9O14990 202 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 TCL1BO95988 128 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 ATP6V0CP27449 155 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 DSCR10P59022 87 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 KRTAP10-12P60413 245 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 TMEM141Q96I45 108 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 NKX6-2Q9C056 277 aaPredicted RBP1.18□□□□□ -2.22
VRK3-204ENST00000593912 ACTR3CQ9C0K3 210 aaPredicted RBP1.18□□□□□ -2.22
VRK3-204ENST00000593912 LAMTOR3Q9UHA4 124 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 HSPB11Q9Y547 144 aa1.18□□□□□ -2.22
VRK3-204ENST00000593912 XKRY2A2RUG3 117 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 TCAPO15273 167 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 SPINK8P0C7L1 97 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 RAB4AP20338 218 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 SPRR1BP22528 89 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 IFI27P40305 119 aaPredicted RBP1.17□□□□□ -2.22
VRK3-204ENST00000593912 AKR1D1P51857 326 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 SOSTDC1Q6X4U4 206 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 TEX43Q6ZNM6 134 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 AMN1Q8IY45 258 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 ERG28Q9UKR5 140 aa1.17□□□□□ -2.22
VRK3-204ENST00000593912 A0A0U1RRA0 63 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 PAGE4O60829 102 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 ATP5LO75964 103 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 RPL35P42766 123 aaKnown RBP1.16□□□□□ -2.22
VRK3-204ENST00000593912 CENPWQ5EE01 88 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 C2orf88Q9BSF0 95 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 VCX3BQ9H321 246 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 VCX3AQ9NNX9 186 aa1.16□□□□□ -2.22
VRK3-204ENST00000593912 CTXND1A0A1B0GTU2 59 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 LOC389332A0A1B0GUA5 103 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 S100A9P06702 114 aaKnown RBP1.15□□□□□ -2.23
VRK3-204ENST00000593912 BTCP35070 178 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 SPINK7P58062 85 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 HERVK_113P63121 156 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 ZNF345Q14585 488 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 PYDC2Q56P42 97 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 PDZD11Q5EBL8 140 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 SLC25A34Q6PIV7 304 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 C2orf66Q6UXQ4 117 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 TMUB2Q71RG4 321 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 NUDT10Q8NFP7 164 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 NUDT11Q96G61 164 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 AMELXQ99217 191 aa1.15□□□□□ -2.23
VRK3-204ENST00000593912 A0A1B0GV50 99 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 MAP1LC3B2A6NCE7 125 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 ATP6V1G2O95670 118 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 MBP02144 154 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 NDUFA6P56556 154 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 KLKP1Q107X0 134 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 H1FX-AS1Q4G0G2 97 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 C5orf47Q569G3 176 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 TMEM136Q6ZRR5 245 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 BOD1L2Q8IYS8 172 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 TCEAL7Q9BRU2 100 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 SMIM2Q9BVW6 85 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 MAP1LC3BQ9GZQ8 125 aa1.14□□□□□ -2.23
VRK3-204ENST00000593912 H0YAA0 97 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 MT1EP04732 61 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 DDTP30046 118 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 LINC00158P58513 81 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 JOSD1Q15040 202 aaPredicted RBP1.13□□□□□ -2.23
VRK3-204ENST00000593912 MRPL51Q4U2R6 128 aaKnown RBP1.13□□□□□ -2.23
VRK3-204ENST00000593912 LCA10Q71F78 164 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 ENKURQ8TC29 256 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 PSMG3Q9BT73 122 aaPredicted RBP1.13□□□□□ -2.23
VRK3-204ENST00000593912 VCX2Q9H322 139 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 TNFSF18Q9UNG2 199 aa1.13□□□□□ -2.23
VRK3-204ENST00000593912 A0A1B0GWB2 263 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 SERF2P84101 59 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 COX17Q14061 63 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 TAL2Q16559 108 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 KRTAP19-7Q3SYF9 63 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 LINC00299Q6ZSB3 139 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 PPP1R1CQ8WVI7 109 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 V9GYH0 126 aa1.12□□□□□ -2.23
VRK3-204ENST00000593912 TRBV7-7A0A0K0K1E9 115 aa1.11□□□□□ -2.23
VRK3-204ENST00000593912 NAP1L6A6NFF2 107 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms