RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 ANKRD39Q53RE8 183 aa13.01□□□□□ -0.33
CIRBP-229ENST00000590704 TTTY13Q9BZ97 58 aa13.01□□□□□ -0.33
CIRBP-229ENST00000590704 MYMXA0A1B0GTQ4 84 aa13□□□□□ -0.33
CIRBP-229ENST00000590704 PRR3P79522 188 aaKnown RBP13□□□□□ -0.33
CIRBP-229ENST00000590704 C7orf33Q8WU49 177 aa13□□□□□ -0.33
CIRBP-229ENST00000590704 IGLV5-37A0A075B6J1 123 aa12.99□□□□□ -0.33
CIRBP-229ENST00000590704 M0QXV9 152 aa12.99□□□□□ -0.33
CIRBP-229ENST00000590704 INAFM2P0DMQ5 153 aa12.99□□□□□ -0.33
CIRBP-229ENST00000590704 VPREB1P12018 145 aa12.98□□□□□ -0.33
CIRBP-229ENST00000590704 LINC00158P58513 81 aa12.98□□□□□ -0.33
CIRBP-229ENST00000590704 PSORS1C2Q9UIG4 136 aa12.98□□□□□ -0.33
CIRBP-229ENST00000590704 FAT3Q8TDW7 4589 aa12.97□□□□□ -0.33
CIRBP-229ENST00000590704 NMUP48645 174 aa12.97□□□□□ -0.33
CIRBP-229ENST00000590704 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
CIRBP-229ENST00000590704 MIR7-3HGQ8N6C7 128 aa12.97□□□□□ -0.33
CIRBP-229ENST00000590704 TP73-AS1Q9UF72 201 aa12.97□□□□□ -0.33
CIRBP-229ENST00000590704 A0A0J9YXY3 114 aa12.96□□□□□ -0.34
CIRBP-229ENST00000590704 C20orf202A1L168 122 aa12.95□□□□□ -0.34
CIRBP-229ENST00000590704 EIF4EBP3O60516 100 aaPredicted RBP12.95□□□□□ -0.34
CIRBP-229ENST00000590704 SRSF9Q13242 221 aaKnown RBP eCLIP12.95□□□□□ -0.34
CIRBP-229ENST00000590704 ADAMTSL4-AS1Q5T5F5 129 aa12.95□□□□□ -0.34
CIRBP-229ENST00000590704 LITAFQ99732 161 aa12.95□□□□□ -0.34
CIRBP-229ENST00000590704 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
CIRBP-229ENST00000590704 LOC107984156A0A0G2JMH3 177 aa12.93□□□□□ -0.34
CIRBP-229ENST00000590704 ARL17AQ8IVW1 177 aa12.93□□□□□ -0.34
CIRBP-229ENST00000590704 DAND5Q8N907 189 aa12.93□□□□□ -0.34
CIRBP-229ENST00000590704 LINC00167Q96N53 147 aa12.93□□□□□ -0.34
CIRBP-229ENST00000590704 MRPL55Q7Z7F7 128 aaKnown RBP12.92□□□□□ -0.34
CIRBP-229ENST00000590704 SOSTDC1Q6X4U4 206 aa12.91□□□□□ -0.34
CIRBP-229ENST00000590704 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
CIRBP-229ENST00000590704 PCP2Q8IVA1 136 aa12.9□□□□□ -0.34
CIRBP-229ENST00000590704 TMA7Q9Y2S6 64 aaKnown RBP12.89□□□□□ -0.35
CIRBP-229ENST00000590704 ZNF815PA8K554 130 aa12.87□□□□□ -0.35
CIRBP-229ENST00000590704 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
CIRBP-229ENST00000590704 RPL37AP8A6NKH3 93 aa12.86□□□□□ -0.35
CIRBP-229ENST00000590704 AKR1D1P51857 326 aa12.86□□□□□ -0.35
CIRBP-229ENST00000590704 LBHQ53QV2 105 aaPredicted RBP12.86□□□□□ -0.35
CIRBP-229ENST00000590704 C1orf137Q5JT78 98 aa12.85□□□□□ -0.35
CIRBP-229ENST00000590704 UBE2BP63146 152 aa12.85□□□□□ -0.35
CIRBP-229ENST00000590704 BOD1L2Q8IYS8 172 aa12.85□□□□□ -0.35
CIRBP-229ENST00000590704 IGLV1-50A0A075B6I6 118 aa12.84□□□□□ -0.35
CIRBP-229ENST00000590704 TIMM17BO60830 172 aa12.84□□□□□ -0.35
CIRBP-229ENST00000590704 IGLV7-43P04211 117 aa12.84□□□□□ -0.35
CIRBP-229ENST00000590704 RPL24P83731 157 aaKnown RBP12.84□□□□□ -0.35
CIRBP-229ENST00000590704 SCGB1D1O95968 90 aa12.83□□□□□ -0.36
CIRBP-229ENST00000590704 NKAPP1Q8N9T2 125 aa12.83□□□□□ -0.36
CIRBP-229ENST00000590704 JOSD1Q15040 202 aaPredicted RBP12.81□□□□□ -0.36
CIRBP-229ENST00000590704 TNXBP22105 4242 aa12.81□□□□□ -0.36
CIRBP-229ENST00000590704 SPINK6Q6UWN8 80 aa12.79□□□□□ -0.36
CIRBP-229ENST00000590704 IGKV2-28A0A075B6P5 120 aa12.78□□□□□ -0.36
CIRBP-229ENST00000590704 KRTAP29-1A8MX34 341 aaPredicted RBP12.78□□□□□ -0.36
CIRBP-229ENST00000590704 M0R378 163 aa12.78□□□□□ -0.36
CIRBP-229ENST00000590704 IGKV2D-28P01615 120 aa12.78□□□□□ -0.36
CIRBP-229ENST00000590704 NPC2P61916 151 aa12.78□□□□□ -0.36
CIRBP-229ENST00000590704 LINC00308Q8TCZ7 52 aa12.78□□□□□ -0.36
CIRBP-229ENST00000590704 KRTAP13-1Q8IUC0 172 aa12.78□□□□□ -0.36
CIRBP-229ENST00000590704 TMEM238C9JI98 176 aa12.76□□□□□ -0.37
CIRBP-229ENST00000590704 NCR3O14931 201 aa12.76□□□□□ -0.37
CIRBP-229ENST00000590704 NDUFC2O95298 119 aa12.76□□□□□ -0.37
CIRBP-229ENST00000590704 PYY3Q5JQD4 70 aa12.76□□□□□ -0.37
CIRBP-229ENST00000590704 BCE1O60756 84 aa12.75□□□□□ -0.37
CIRBP-229ENST00000590704 SPANXDQ9BXN6 97 aa12.75□□□□□ -0.37
CIRBP-229ENST00000590704 SPANXCQ9NY87 97 aa12.75□□□□□ -0.37
CIRBP-229ENST00000590704 DMBT1Q9UGM3 2413 aaPredicted RBP12.74□□□□□ -0.37
CIRBP-229ENST00000590704 MT1HL1P0DM35 61 aa12.73□□□□□ -0.37
CIRBP-229ENST00000590704 TMEM126AQ9H061 195 aa12.73□□□□□ -0.37
CIRBP-229ENST00000590704 ZNF861PO60384 105 aa12.72□□□□□ -0.37
CIRBP-229ENST00000590704 TRBV10-3A0A0K0K1G6 114 aa12.72□□□□□ -0.37
CIRBP-229ENST00000590704 TRBV10-2A0A0K0K1G8 114 aa12.72□□□□□ -0.37
CIRBP-229ENST00000590704 HSBP1L1C9JCN9 74 aa12.72□□□□□ -0.37
CIRBP-229ENST00000590704 KCNQ1DNQ9H478 68 aa12.72□□□□□ -0.37
CIRBP-229ENST00000590704 KRTAP4-16G5E9R7 235 aaPredicted RBP12.71□□□□□ -0.38
CIRBP-229ENST00000590704 OXTP01178 125 aa12.71□□□□□ -0.38
CIRBP-229ENST00000590704 SPRR1AP35321 89 aa12.71□□□□□ -0.38
CIRBP-229ENST00000590704 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.38
CIRBP-229ENST00000590704 HERC1Q15751 4861 aa12.7□□□□□ -0.38
CIRBP-229ENST00000590704 H0Y9J4 135 aa12.69□□□□□ -0.38
CIRBP-229ENST00000590704 IGLV6-57P01721 117 aa12.69□□□□□ -0.38
CIRBP-229ENST00000590704 KRTAP1-4P0C5Y4 121 aa12.69□□□□□ -0.38
CIRBP-229ENST00000590704 COX8AP10176 69 aa12.69□□□□□ -0.38
CIRBP-229ENST00000590704 REG3GQ6UW15 175 aa12.69□□□□□ -0.38
CIRBP-229ENST00000590704 SPANXB1Q9NS25 103 aaPredicted RBP12.69□□□□□ -0.38
CIRBP-229ENST00000590704 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
CIRBP-229ENST00000590704 PPDPFQ9H3Y8 114 aa12.68□□□□□ -0.38
CIRBP-229ENST00000590704 LINC01600Q96MT4 127 aa12.67□□□□□ -0.38
CIRBP-229ENST00000590704 PAM16Q9Y3D7 125 aa12.67□□□□□ -0.38
CIRBP-229ENST00000590704 MUSTN1Q8IVN3 82 aa12.66□□□□□ -0.38
CIRBP-229ENST00000590704 DLEU1O43261 78 aa12.65□□□□□ -0.38
CIRBP-229ENST00000590704 C14orf144Q96I85 54 aa12.65□□□□□ -0.38
CIRBP-229ENST00000590704 SPATA45Q537H7 98 aa12.65□□□□□ -0.38
CIRBP-229ENST00000590704 Q6ZVH6 145 aa12.65□□□□□ -0.38
CIRBP-229ENST00000590704 DIRC1Q969H9 104 aa12.65□□□□□ -0.38
CIRBP-229ENST00000590704 PRYO14603 147 aa12.64□□□□□ -0.39
CIRBP-229ENST00000590704 IFITM1P13164 125 aa12.64□□□□□ -0.39
CIRBP-229ENST00000590704 DDTP30046 118 aa12.64□□□□□ -0.39
CIRBP-229ENST00000590704 KRTAP10-8P60410 259 aa12.64□□□□□ -0.39
CIRBP-229ENST00000590704 PRLHP81277 87 aa12.64□□□□□ -0.39
CIRBP-229ENST00000590704 LINC00337Q8N6G1 96 aa12.64□□□□□ -0.39
CIRBP-229ENST00000590704 J3QL48 77 aa12.63□□□□□ -0.39
CIRBP-229ENST00000590704 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms