RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 ATP5LO75964 103 aa9.68□□□□□ -0.86
SF3A2-203ENST00000587637 SND1-IT1Q9HBX3 110 aa9.68□□□□□ -0.86
SF3A2-203ENST00000587637 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
SF3A2-203ENST00000587637 HSBP1O75506 76 aa9.67□□□□□ -0.86
SF3A2-203ENST00000587637 ZNF22P17026 224 aaPredicted RBP9.67□□□□□ -0.86
SF3A2-203ENST00000587637 CDIP1Q9H305 208 aa9.67□□□□□ -0.86
SF3A2-203ENST00000587637 A0A096LNJ9 63 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 IGLV5-39A0A0G2JS06 123 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 LINC00614P0C842 121 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 IGLC3P0DOY3 106 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 TPRXLQ17RH7 258 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
SF3A2-203ENST00000587637 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
SF3A2-203ENST00000587637 H3BRM9 83 aa9.64□□□□□ -0.87
SF3A2-203ENST00000587637 NDUFA6P56556 154 aa9.64□□□□□ -0.87
SF3A2-203ENST00000587637 PMCHL1Q16048 86 aa9.64□□□□□ -0.87
SF3A2-203ENST00000587637 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
SF3A2-203ENST00000587637 URB1-AS1Q96HZ7 61 aa9.64□□□□□ -0.87
SF3A2-203ENST00000587637 S100A2P29034 98 aa9.63□□□□□ -0.87
SF3A2-203ENST00000587637 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
SF3A2-203ENST00000587637 PLEKHB2Q96CS7 222 aa9.62□□□□□ -0.87
SF3A2-203ENST00000587637 HIGD2AQ9BW72 106 aa9.62□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BKO60814 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BJP06899 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BOP23527 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BBP33778 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BDP58876 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BCP62807 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST2H2BEQ16778 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BHQ93079 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BNQ99877 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 HIST1H2BMQ99879 126 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
SF3A2-203ENST00000587637 A0A0U1RRA0 63 aa9.59□□□□□ -0.87
SF3A2-203ENST00000587637 KRTAP9-6A0A140TA67 174 aa9.59□□□□□ -0.87
SF3A2-203ENST00000587637 HBDP02042 147 aa9.59□□□□□ -0.87
SF3A2-203ENST00000587637 SPRR4Q96PI1 79 aa9.58□□□□□ -0.88
SF3A2-203ENST00000587637 HSPB8Q9UJY1 196 aa9.58□□□□□ -0.88
SF3A2-203ENST00000587637 SERF1AO75920 110 aa9.57□□□□□ -0.88
SF3A2-203ENST00000587637 DAND5Q8N907 189 aa9.57□□□□□ -0.88
SF3A2-203ENST00000587637 RPL24P83731 157 aaKnown RBP9.56□□□□□ -0.88
SF3A2-203ENST00000587637 TMA7Q9Y2S6 64 aaKnown RBP9.56□□□□□ -0.88
SF3A2-203ENST00000587637 NCR3O14931 201 aa9.55□□□□□ -0.88
SF3A2-203ENST00000587637 LEPROTL1O95214 131 aa9.55□□□□□ -0.88
SF3A2-203ENST00000587637 TMEM170BQ5T4T1 132 aa9.55□□□□□ -0.88
SF3A2-203ENST00000587637 KRTAP4-1Q9BYQ7 146 aa9.55□□□□□ -0.88
SF3A2-203ENST00000587637 AKR1D1P51857 326 aa9.54□□□□□ -0.88
SF3A2-203ENST00000587637 LINC00158P58513 81 aa9.53□□□□□ -0.88
SF3A2-203ENST00000587637 Q8NBF4 154 aa9.53□□□□□ -0.88
SF3A2-203ENST00000587637 MAP1LC3CQ9BXW4 147 aa9.53□□□□□ -0.88
SF3A2-203ENST00000587637 COX17Q14061 63 aa9.52□□□□□ -0.89
SF3A2-203ENST00000587637 COA6Q5JTJ3 125 aaKnown RBP9.52□□□□□ -0.89
SF3A2-203ENST00000587637 C20orf202A1L168 122 aa9.51□□□□□ -0.89
SF3A2-203ENST00000587637 KRTAP13-3Q3SY46 172 aa9.51□□□□□ -0.89
SF3A2-203ENST00000587637 SMIM13P0DJ93 91 aa9.5□□□□□ -0.89
SF3A2-203ENST00000587637 FABP4P15090 132 aa9.49□□□□□ -0.89
SF3A2-203ENST00000587637 FAM19A2Q8N3H0 131 aa9.49□□□□□ -0.89
SF3A2-203ENST00000587637 TMEM223A0PJW6 202 aa9.48□□□□□ -0.89
SF3A2-203ENST00000587637 SNRPEP62304 92 aaKnown RBP9.48□□□□□ -0.89
SF3A2-203ENST00000587637 IFI27L1Q96BM0 104 aa9.48□□□□□ -0.89
SF3A2-203ENST00000587637 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
SF3A2-203ENST00000587637 PRYO14603 147 aa9.47□□□□□ -0.89
SF3A2-203ENST00000587637 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
SF3A2-203ENST00000587637 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
SF3A2-203ENST00000587637 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.9
SF3A2-203ENST00000587637 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
SF3A2-203ENST00000587637 KRTAP4-16G5E9R7 235 aaPredicted RBP9.45□□□□□ -0.9
SF3A2-203ENST00000587637 H0Y8G0 127 aa9.45□□□□□ -0.9
SF3A2-203ENST00000587637 SPRR1AP35321 89 aa9.45□□□□□ -0.9
SF3A2-203ENST00000587637 MIR7-3HGQ8N6C7 128 aa9.45□□□□□ -0.9
SF3A2-203ENST00000587637 ZNF706Q9Y5V0 76 aaPredicted RBP9.45□□□□□ -0.9
SF3A2-203ENST00000587637 TRBV10-3A0A0K0K1G6 114 aa9.44□□□□□ -0.9
SF3A2-203ENST00000587637 ERC2-IT1O76042 136 aa9.44□□□□□ -0.9
SF3A2-203ENST00000587637 KRTDAPP60985 99 aa9.44□□□□□ -0.9
SF3A2-203ENST00000587637 CTAG1AP78358 180 aa9.44□□□□□ -0.9
SF3A2-203ENST00000587637 MEIG1Q5JSS6 88 aa9.44□□□□□ -0.9
SF3A2-203ENST00000587637 C5orf52A6NGY3 159 aa9.43□□□□□ -0.9
SF3A2-203ENST00000587637 MOBPQ13875 183 aa9.43□□□□□ -0.9
SF3A2-203ENST00000587637 ASB16-AS1Q495Z4 193 aa9.43□□□□□ -0.9
SF3A2-203ENST00000587637 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
SF3A2-203ENST00000587637 HIST3H2BBQ8N257 126 aa9.43□□□□□ -0.9
SF3A2-203ENST00000587637 LINC00337Q8N6G1 96 aa9.43□□□□□ -0.9
SF3A2-203ENST00000587637 IGLV9-49A0A0B4J1Y8 123 aa9.42□□□□□ -0.9
SF3A2-203ENST00000587637 ETDCA0A1B0GVM5 59 aa9.42□□□□□ -0.9
SF3A2-203ENST00000587637 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
SF3A2-203ENST00000587637 GAGE2AQ6NT46 116 aa9.42□□□□□ -0.9
SF3A2-203ENST00000587637 SFTA2Q6UW10 78 aa9.42□□□□□ -0.9
SF3A2-203ENST00000587637 KCNQ1DNQ9H478 68 aa9.42□□□□□ -0.9
SF3A2-203ENST00000587637 TRAV12-1A0A0B4J245 112 aa9.41□□□□□ -0.9
SF3A2-203ENST00000587637 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
SF3A2-203ENST00000587637 PET117Q6UWS5 81 aa9.41□□□□□ -0.9
SF3A2-203ENST00000587637 PLNP26678 52 aa9.4□□□□□ -0.9
SF3A2-203ENST00000587637 HSBP1L1C9JCN9 74 aa9.39□□□□□ -0.91
SF3A2-203ENST00000587637 HERVK_113P61574 105 aa9.39□□□□□ -0.91
SF3A2-203ENST00000587637 HIST1H2BLQ99880 126 aa9.39□□□□□ -0.91
SF3A2-203ENST00000587637 B5MCH6 92 aa9.38□□□□□ -0.91
SF3A2-203ENST00000587637 SYS1-DBNDD2H3BUS1 97 aa9.38□□□□□ -0.91
SF3A2-203ENST00000587637 SCGB1D1O95968 90 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms