RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	PMCHL1	Q16048	86 aa		12.71	□□□□□ -0.37
PLEKHM1-214	ENST00000586084	HIST2H2BE	Q16778	126 aa		12.71	□□□□□ -0.37
PLEKHM1-214	ENST00000586084	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.71	□□□□□ -0.37
PLEKHM1-214	ENST00000586084	HIST1H2BH	Q93079	126 aa		12.71	□□□□□ -0.37
PLEKHM1-214	ENST00000586084	HIST1H2BN	Q99877	126 aa		12.71	□□□□□ -0.37
PLEKHM1-214	ENST00000586084	HIST1H2BM	Q99879	126 aa		12.71	□□□□□ -0.37
PLEKHM1-214	ENST00000586084	IGLV7-46	A0A075B6I9	117 aa		12.7	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	SERF1A	O75920	110 aa		12.7	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	IGKV2-28	A0A075B6P5	120 aa		12.69	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	IGKV2D-28	P01615	120 aa		12.69	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	PMVK	Q15126	192 aa		12.69	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	SPINK8	P0C7L1	97 aa		12.67	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	CST9L	Q9H4G1	147 aa		12.67	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	PRLH	P81277	87 aa		12.66	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	FAM19A1	Q7Z5A9	133 aa		12.65	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	FAM19A2	Q8N3H0	131 aa		12.65	□□□□□ -0.38
PLEKHM1-214	ENST00000586084	KRTAP9-6	A0A140TA67	174 aa		12.64	□□□□□ -0.39
PLEKHM1-214	ENST00000586084		H3BRM9	83 aa		12.64	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	LEPROTL1	O95214	131 aa		12.64	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	NDUFA6	P56556	154 aa		12.64	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	LINC00310	P59036	64 aa		12.64	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	IFI27L1	Q96BM0	104 aa		12.64	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	PFN2	P35080	140 aa		12.63	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	HSPB8	Q9UJY1	196 aa		12.63	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	FAT4	Q6V0I7	4981 aa		12.62	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	TMEM126A	Q9H061	195 aa		12.62	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	COA6	Q5JTJ3	125 aa	Known RBP	12.61	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	RPL24	P83731	157 aa	Known RBP	12.6	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	PPDPF	Q9H3Y8	114 aa		12.6	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	TRAV12-1	A0A0B4J245	112 aa		12.59	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	TMEM238	C9JI98	176 aa		12.59	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	VPREB1	P12018	145 aa		12.59	□□□□□ -0.39
PLEKHM1-214	ENST00000586084	SPAG11A	Q6PDA7	123 aa		12.58	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	SND1-IT1	Q9HBX3	110 aa		12.58	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	FABP4	P15090	132 aa		12.57	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	COX17	Q14061	63 aa		12.57	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	PLEKHB2	Q96CS7	222 aa		12.57	□□□□□ -0.4
PLEKHM1-214	ENST00000586084		M0R378	163 aa		12.56	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	IGLC3	P0DOY3	106 aa		12.56	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	ERG28	Q9UKR5	140 aa		12.56	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.56	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	C3orf22	Q8N5N4	141 aa		12.55	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	IGLV5-39	A0A0G2JS06	123 aa		12.54	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	MAP1LC3C	Q9BXW4	147 aa		12.54	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	FP248	Q71RG6	208 aa	Predicted RBP	12.53	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	HIGD2A	Q9BW72	106 aa		12.53	□□□□□ -0.4
PLEKHM1-214	ENST00000586084	S100A6	P06703	90 aa		12.52	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	C4orf48	Q5BLP8	95 aa		12.51	□□□□□ -0.41
PLEKHM1-214	ENST00000586084		H0Y8G0	127 aa		12.5	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	SFTA2	Q6UW10	78 aa		12.5	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	LINC00337	Q8N6G1	96 aa		12.5	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	MUC17	Q685J3	4493 aa		12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	C11orf86	A6NJI1	115 aa		12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	ZNF22	P17026	224 aa	Predicted RBP	12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	TMEM170B	Q5T4T1	132 aa		12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	ZNF625	Q96I27	306 aa	Predicted RBP	12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	SPRR4	Q96PI1	79 aa		12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	ZNF706	Q9Y5V0	76 aa	Predicted RBP	12.48	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	PLN	P26678	52 aa		12.47	□□□□□ -0.41
PLEKHM1-214	ENST00000586084		Q8NDZ9	215 aa		12.46	□□□□□ -0.41
PLEKHM1-214	ENST00000586084	SYS1-DBNDD2	H3BUS1	97 aa		12.45	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	S100A2	P29034	98 aa		12.45	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	PET117	Q6UWS5	81 aa		12.44	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	DPM2	O94777	84 aa		12.43	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	KRTAP13-3	Q3SY46	172 aa		12.43	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	LINC01547	P58512	204 aa	Predicted RBP	12.42	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	ASB16-AS1	Q495Z4	193 aa		12.42	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	IGKC	P01834	107 aa		12.41	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	LINC00158	P58513	81 aa		12.41	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	HIST3H2BB	Q8N257	126 aa		12.41	□□□□□ -0.42
PLEKHM1-214	ENST00000586084		Q8NBF4	154 aa		12.41	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	TMEM223	A0PJW6	202 aa		12.4	□□□□□ -0.42
PLEKHM1-214	ENST00000586084	SPINK1	P00995	79 aa		12.39	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	C3orf79	P0CE67	100 aa		12.39	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	AKR1D1	P51857	326 aa		12.39	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	KRTDAP	P60985	99 aa		12.39	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	DAND5	Q8N907	189 aa		12.39	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	C20orf202	A1L168	122 aa		12.38	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	PRY	O14603	147 aa		12.38	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	HERVK_113	P61574	105 aa		12.38	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	LINC01545	Q5VT33	79 aa		12.38	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	SEC61B	P60468	96 aa	Known RBP	12.37	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	SNRPE	P62304	92 aa	Known RBP	12.37	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	PMCHL2	Q9BQD1	86 aa		12.37	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	HIST1H2BL	Q99880	126 aa		12.36	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	C5orf52	A6NGY3	159 aa		12.35	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	NDUFA12	Q9UI09	145 aa		12.35	□□□□□ -0.43
PLEKHM1-214	ENST00000586084		A0A0U1RRA0	63 aa		12.34	□□□□□ -0.43
PLEKHM1-214	ENST00000586084	SMCR5	Q8TEV8	140 aa		12.33	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	SPRR1A	P35321	89 aa		12.32	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	KCNQ1DN	Q9H478	68 aa		12.32	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	ETDC	A0A1B0GVM5	59 aa		12.31	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	BOD1L2	Q8IYS8	172 aa		12.31	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	LEPROT	O15243	131 aa		12.3	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	NCR3	O14931	201 aa		12.29	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	S100A12	P80511	92 aa		12.29	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	LINC00483	Q53H64	154 aa		12.29	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	LCE2D	Q5TA82	110 aa	Predicted RBP	12.29	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	12.28	□□□□□ -0.44
PLEKHM1-214	ENST00000586084	SMIM13	P0DJ93	91 aa		12.28	□□□□□ -0.44

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