RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 ATOH7Q8N100 152 aa13.31□□□□□ -0.28
RETREG3-202ENST00000585726 PSORS1C2Q9UIG4 136 aa13.3□□□□□ -0.28
RETREG3-202ENST00000585726 NMUP48645 174 aa13.29□□□□□ -0.28
RETREG3-202ENST00000585726 KRTAP11-1Q8IUC1 163 aa13.29□□□□□ -0.28
RETREG3-202ENST00000585726 PLA2G2DQ9UNK4 145 aa13.28□□□□□ -0.28
RETREG3-202ENST00000585726 C5orf52A6NGY3 159 aa13.27□□□□□ -0.29
RETREG3-202ENST00000585726 LINC00587B1AMM8 73 aa13.27□□□□□ -0.29
RETREG3-202ENST00000585726 LBHQ53QV2 105 aaPredicted RBP13.27□□□□□ -0.29
RETREG3-202ENST00000585726 C1orf137Q5JT78 98 aa13.27□□□□□ -0.29
RETREG3-202ENST00000585726 MRPL55Q7Z7F7 128 aaKnown RBP13.27□□□□□ -0.29
RETREG3-202ENST00000585726 MIR7-3HGQ8N6C7 128 aa13.27□□□□□ -0.29
RETREG3-202ENST00000585726 NKAPP1Q8N9T2 125 aa13.27□□□□□ -0.29
RETREG3-202ENST00000585726 GAGE10A6NGK3 116 aa13.26□□□□□ -0.29
RETREG3-202ENST00000585726 IGKV2D-26A0A0A0MRZ7 120 aa13.25□□□□□ -0.29
RETREG3-202ENST00000585726 DAND5Q8N907 189 aa13.24□□□□□ -0.29
RETREG3-202ENST00000585726 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
RETREG3-202ENST00000585726 LINC00167Q96N53 147 aa13.23□□□□□ -0.29
RETREG3-202ENST00000585726 IGLV5-37A0A075B6J1 123 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 A0A0J9YXY3 114 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 RPL37AP8A6NKH3 93 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 VPREB1P12018 145 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 AKR1D1P51857 326 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 RPL24P83731 157 aaKnown RBP13.22□□□□□ -0.29
RETREG3-202ENST00000585726 ANKRD39Q53RE8 183 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 Q8NDZ9 215 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 TTTY13Q9BZ97 58 aa13.22□□□□□ -0.29
RETREG3-202ENST00000585726 ZNF815PA8K554 130 aa13.2□□□□□ -0.3
RETREG3-202ENST00000585726 PKHD1L1Q86WI1 4243 aa13.19□□□□□ -0.3
RETREG3-202ENST00000585726 BOD1L2Q8IYS8 172 aa13.19□□□□□ -0.3
RETREG3-202ENST00000585726 SCGB1D1O95968 90 aa13.17□□□□□ -0.3
RETREG3-202ENST00000585726 TMA7Q9Y2S6 64 aaKnown RBP13.17□□□□□ -0.3
RETREG3-202ENST00000585726 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
RETREG3-202ENST00000585726 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
RETREG3-202ENST00000585726 IGLV7-43P04211 117 aa13.16□□□□□ -0.3
RETREG3-202ENST00000585726 NPC2P61916 151 aa13.16□□□□□ -0.3
RETREG3-202ENST00000585726 ADAMTSL4-AS1Q5T5F5 129 aa13.15□□□□□ -0.3
RETREG3-202ENST00000585726 SPINK6Q6UWN8 80 aa13.15□□□□□ -0.3
RETREG3-202ENST00000585726 FLG2Q5D862 2391 aaPredicted RBP13.15□□□□□ -0.3
RETREG3-202ENST00000585726 NCR3O14931 201 aa13.14□□□□□ -0.31
RETREG3-202ENST00000585726 SRSF9Q13242 221 aaKnown RBP eCLIP13.14□□□□□ -0.31
RETREG3-202ENST00000585726 MIEN1Q9BRT3 115 aa13.14□□□□□ -0.31
RETREG3-202ENST00000585726 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
RETREG3-202ENST00000585726 PCP2Q8IVA1 136 aa13.12□□□□□ -0.31
RETREG3-202ENST00000585726 M0R378 163 aa13.11□□□□□ -0.31
RETREG3-202ENST00000585726 SCGB1D4Q6XE38 83 aa13.11□□□□□ -0.31
RETREG3-202ENST00000585726 IGLV1-50A0A075B6I6 118 aa13.1□□□□□ -0.31
RETREG3-202ENST00000585726 LITAFQ99732 161 aa13.1□□□□□ -0.31
RETREG3-202ENST00000585726 J3QL48 77 aa13.09□□□□□ -0.31
RETREG3-202ENST00000585726 TIMM17BO60830 172 aa13.09□□□□□ -0.31
RETREG3-202ENST00000585726 SOSTDC1Q6X4U4 206 aa13.09□□□□□ -0.31
RETREG3-202ENST00000585726 MYCBP2O75592 4640 aa13.08□□□□□ -0.32
RETREG3-202ENST00000585726 LOC107984156A0A0G2JMH3 177 aa13.08□□□□□ -0.32
RETREG3-202ENST00000585726 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-202ENST00000585726 EIF4EBP3O60516 100 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-202ENST00000585726 BCE1O60756 84 aa13.08□□□□□ -0.32
RETREG3-202ENST00000585726 ARL17AQ8IVW1 177 aa13.08□□□□□ -0.32
RETREG3-202ENST00000585726 TMEM238C9JI98 176 aa13.07□□□□□ -0.32
RETREG3-202ENST00000585726 OXTP01178 125 aa13.07□□□□□ -0.32
RETREG3-202ENST00000585726 REG3GQ6UW15 175 aa13.05□□□□□ -0.32
RETREG3-202ENST00000585726 LINC00308Q8TCZ7 52 aa13.05□□□□□ -0.32
RETREG3-202ENST00000585726 DIRC1Q969H9 104 aa13.05□□□□□ -0.32
RETREG3-202ENST00000585726 ZNF861PO60384 105 aa13.04□□□□□ -0.32
RETREG3-202ENST00000585726 TMEM126AQ9H061 195 aa13.04□□□□□ -0.32
RETREG3-202ENST00000585726 UBE2AP49459 152 aa13.03□□□□□ -0.32
RETREG3-202ENST00000585726 H0Y9J4 135 aa13.02□□□□□ -0.33
RETREG3-202ENST00000585726 NDUFC2O95298 119 aa13.02□□□□□ -0.33
RETREG3-202ENST00000585726 SPANXB1Q9NS25 103 aaPredicted RBP13.02□□□□□ -0.33
RETREG3-202ENST00000585726 TRBV10-3A0A0K0K1G6 114 aa13.01□□□□□ -0.33
RETREG3-202ENST00000585726 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
RETREG3-202ENST00000585726 FAM19A1Q7Z5A9 133 aa13.01□□□□□ -0.33
RETREG3-202ENST00000585726 TRBV10-2A0A0K0K1G8 114 aa13□□□□□ -0.33
RETREG3-202ENST00000585726 LRP1Q07954 4544 aaKnown RBP13□□□□□ -0.33
RETREG3-202ENST00000585726 FAT3Q8TDW7 4589 aa13□□□□□ -0.33
RETREG3-202ENST00000585726 PRLHP81277 87 aa12.99□□□□□ -0.33
RETREG3-202ENST00000585726 JOSD1Q15040 202 aaPredicted RBP12.99□□□□□ -0.33
RETREG3-202ENST00000585726 S100A7L2Q5SY68 101 aa12.99□□□□□ -0.33
RETREG3-202ENST00000585726 SPANXDQ9BXN6 97 aa12.99□□□□□ -0.33
RETREG3-202ENST00000585726 SPANXCQ9NY87 97 aa12.99□□□□□ -0.33
RETREG3-202ENST00000585726 DDTP30046 118 aa12.98□□□□□ -0.33
RETREG3-202ENST00000585726 PRYO14603 147 aa12.97□□□□□ -0.33
RETREG3-202ENST00000585726 PAM16Q9Y3D7 125 aa12.97□□□□□ -0.33
RETREG3-202ENST00000585726 S100A12P80511 92 aa12.96□□□□□ -0.33
RETREG3-202ENST00000585726 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
RETREG3-202ENST00000585726 KCNQ1DNQ9H478 68 aa12.95□□□□□ -0.34
RETREG3-202ENST00000585726 SPATA45Q537H7 98 aa12.94□□□□□ -0.34
RETREG3-202ENST00000585726 KRTAP13-1Q8IUC0 172 aa12.94□□□□□ -0.34
RETREG3-202ENST00000585726 MUSTN1Q8IVN3 82 aa12.94□□□□□ -0.34
RETREG3-202ENST00000585726 VAMP8Q9BV40 100 aa12.94□□□□□ -0.34
RETREG3-202ENST00000585726 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
RETREG3-202ENST00000585726 COX8AP10176 69 aa12.92□□□□□ -0.34
RETREG3-202ENST00000585726 IFITM1P13164 125 aa12.92□□□□□ -0.34
RETREG3-202ENST00000585726 Q6ZVH6 145 aa12.92□□□□□ -0.34
RETREG3-202ENST00000585726 COPS9Q8WXC6 57 aa12.92□□□□□ -0.34
RETREG3-202ENST00000585726 ETDCA0A1B0GVM5 59 aa12.91□□□□□ -0.34
RETREG3-202ENST00000585726 IGLV6-57P01721 117 aa12.91□□□□□ -0.34
RETREG3-202ENST00000585726 MT1HL1P0DM35 61 aa12.91□□□□□ -0.34
RETREG3-202ENST00000585726 C14orf144Q96I85 54 aa12.91□□□□□ -0.34
RETREG3-202ENST00000585726 SPRR1AP35321 89 aa12.89□□□□□ -0.35
RETREG3-202ENST00000585726 PYY3Q5JQD4 70 aa12.89□□□□□ -0.35
RETREG3-202ENST00000585726 HIGD2AQ9BW72 106 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms