RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 HERC1Q15751 4861 aa10.14□□□□□ -0.79
CSNK1D-223ENST00000584472 SMIM6P0DI80 62 aa10.13□□□□□ -0.79
CSNK1D-223ENST00000584472 COX8AP10176 69 aa10.13□□□□□ -0.79
CSNK1D-223ENST00000584472 LINC00474Q9P2X8 69 aa10.13□□□□□ -0.79
CSNK1D-223ENST00000584472 BOD1L2Q8IYS8 172 aa10.12□□□□□ -0.79
CSNK1D-223ENST00000584472 LINC00528Q8N1L1 170 aa10.12□□□□□ -0.79
CSNK1D-223ENST00000584472 TIMM17BO60830 172 aa10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 PLA2G1BP04054 148 aaKnown RBP10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 S100A12P80511 92 aa10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 C9orf129Q5T035 196 aaKnown RBP10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 SCGB1D4Q6XE38 83 aa10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 MIR7-3HGQ8N6C7 128 aa10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 XAGE1AQ9HD64 81 aa10.11□□□□□ -0.79
CSNK1D-223ENST00000584472 DLEU1O43261 78 aa10.1□□□□□ -0.79
CSNK1D-223ENST00000584472 LITAFQ99732 161 aa10.1□□□□□ -0.79
CSNK1D-223ENST00000584472 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
CSNK1D-223ENST00000584472 A0A087WYN8 130 aa10.09□□□□□ -0.79
CSNK1D-223ENST00000584472 ADAMTSL4-AS1Q5T5F5 129 aa10.09□□□□□ -0.79
CSNK1D-223ENST00000584472 DPH3Q96FX2 82 aa10.09□□□□□ -0.79
CSNK1D-223ENST00000584472 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
CSNK1D-223ENST00000584472 TP73-AS1Q9UF72 201 aa10.09□□□□□ -0.79
CSNK1D-223ENST00000584472 DAND5Q8N907 189 aa10.08□□□□□ -0.8
CSNK1D-223ENST00000584472 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
CSNK1D-223ENST00000584472 A0A1W2PNN7 141 aa10.06□□□□□ -0.8
CSNK1D-223ENST00000584472 SLC25A34Q6PIV7 304 aa10.06□□□□□ -0.8
CSNK1D-223ENST00000584472 FAM168BA1KXE4 195 aa10.05□□□□□ -0.8
CSNK1D-223ENST00000584472 TMEM238C9JI98 176 aa10.05□□□□□ -0.8
CSNK1D-223ENST00000584472 SPANXDQ9BXN6 97 aa10.05□□□□□ -0.8
CSNK1D-223ENST00000584472 SPANXCQ9NY87 97 aa10.05□□□□□ -0.8
CSNK1D-223ENST00000584472 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
CSNK1D-223ENST00000584472 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
CSNK1D-223ENST00000584472 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
CSNK1D-223ENST00000584472 PLA2G2DQ9UNK4 145 aa10.04□□□□□ -0.8
CSNK1D-223ENST00000584472 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
CSNK1D-223ENST00000584472 SOSTDC1Q6X4U4 206 aa10.03□□□□□ -0.8
CSNK1D-223ENST00000584472 C12orf57Q99622 126 aa10.03□□□□□ -0.8
CSNK1D-223ENST00000584472 NPC2P61916 151 aa10.02□□□□□ -0.81
CSNK1D-223ENST00000584472 Q6ZVH6 145 aa10.02□□□□□ -0.81
CSNK1D-223ENST00000584472 FAM19A5Q7Z5A7 132 aaPredicted RBP10.02□□□□□ -0.81
CSNK1D-223ENST00000584472 LINC00308Q8TCZ7 52 aa10.02□□□□□ -0.81
CSNK1D-223ENST00000584472 MIEN1Q9BRT3 115 aa10.02□□□□□ -0.81
CSNK1D-223ENST00000584472 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.81
CSNK1D-223ENST00000584472 EIF4EBP3O60516 100 aaPredicted RBP10.01□□□□□ -0.81
CSNK1D-223ENST00000584472 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
CSNK1D-223ENST00000584472 RPL37AP61513 92 aaKnown RBP10.01□□□□□ -0.81
CSNK1D-223ENST00000584472 C2orf91Q6ZV80 131 aa10.01□□□□□ -0.81
CSNK1D-223ENST00000584472 Q8NDZ9 215 aa10.01□□□□□ -0.81
CSNK1D-223ENST00000584472 HIGD1BQ9P298 99 aa10.01□□□□□ -0.81
CSNK1D-223ENST00000584472 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
CSNK1D-223ENST00000584472 VPREB1P12018 145 aa10□□□□□ -0.81
CSNK1D-223ENST00000584472 LINC00518Q8N0U6 118 aa10□□□□□ -0.81
CSNK1D-223ENST00000584472 C7orf33Q8WU49 177 aa10□□□□□ -0.81
CSNK1D-223ENST00000584472 UQCR10Q9UDW1 63 aa10□□□□□ -0.81
CSNK1D-223ENST00000584472 IGLV5-37A0A075B6J1 123 aa9.99□□□□□ -0.81
CSNK1D-223ENST00000584472 IFITM1P13164 125 aa9.99□□□□□ -0.81
CSNK1D-223ENST00000584472 RPL24P83731 157 aaKnown RBP9.99□□□□□ -0.81
CSNK1D-223ENST00000584472 SRSF9Q13242 221 aaKnown RBP eCLIP9.99□□□□□ -0.81
CSNK1D-223ENST00000584472 PRO1933Q9H354 126 aa9.98□□□□□ -0.81
CSNK1D-223ENST00000584472 PPDPFQ9H3Y8 114 aa9.98□□□□□ -0.81
CSNK1D-223ENST00000584472 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
CSNK1D-223ENST00000584472 M0QXV9 152 aa9.97□□□□□ -0.81
CSNK1D-223ENST00000584472 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
CSNK1D-223ENST00000584472 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
CSNK1D-223ENST00000584472 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
CSNK1D-223ENST00000584472 NDUFC2O95298 119 aa9.96□□□□□ -0.82
CSNK1D-223ENST00000584472 NKAPP1Q8N9T2 125 aa9.96□□□□□ -0.82
CSNK1D-223ENST00000584472 PRR3P79522 188 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-223ENST00000584472 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
CSNK1D-223ENST00000584472 HIST1H4GQ99525 98 aa9.95□□□□□ -0.82
CSNK1D-223ENST00000584472 J3QL48 77 aa9.93□□□□□ -0.82
CSNK1D-223ENST00000584472 LBHQ53QV2 105 aaPredicted RBP9.93□□□□□ -0.82
CSNK1D-223ENST00000584472 M0R378 163 aa9.92□□□□□ -0.82
CSNK1D-223ENST00000584472 NCR3O14931 201 aa9.92□□□□□ -0.82
CSNK1D-223ENST00000584472 OXTP01178 125 aa9.92□□□□□ -0.82
CSNK1D-223ENST00000584472 TAL2Q16559 108 aa9.92□□□□□ -0.82
CSNK1D-223ENST00000584472 LINC00167Q96N53 147 aa9.92□□□□□ -0.82
CSNK1D-223ENST00000584472 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
CSNK1D-223ENST00000584472 GAGE10A6NGK3 116 aa9.91□□□□□ -0.82
CSNK1D-223ENST00000584472 TSTD3H0UI37 97 aa9.91□□□□□ -0.82
CSNK1D-223ENST00000584472 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
CSNK1D-223ENST00000584472 IGKV2-28A0A075B6P5 120 aa9.9□□□□□ -0.82
CSNK1D-223ENST00000584472 IGKV2D-28P01615 120 aa9.9□□□□□ -0.82
CSNK1D-223ENST00000584472 A4D1N5 150 aa9.89□□□□□ -0.83
CSNK1D-223ENST00000584472 UBE2BP63146 152 aa9.89□□□□□ -0.83
CSNK1D-223ENST00000584472 KRTAP11-1Q8IUC1 163 aa9.89□□□□□ -0.83
CSNK1D-223ENST00000584472 RPL37AP8A6NKH3 93 aa9.88□□□□□ -0.83
CSNK1D-223ENST00000584472 HSD52Q0P140 79 aa9.88□□□□□ -0.83
CSNK1D-223ENST00000584472 CEND1Q8N111 149 aa9.88□□□□□ -0.83
CSNK1D-223ENST00000584472 IGLV1-50A0A075B6I6 118 aa9.87□□□□□ -0.83
CSNK1D-223ENST00000584472 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
CSNK1D-223ENST00000584472 LINC00337Q8N6G1 96 aa9.86□□□□□ -0.83
CSNK1D-223ENST00000584472 LRP1Q07954 4544 aaKnown RBP9.85□□□□□ -0.83
CSNK1D-223ENST00000584472 IGLV6-57P01721 117 aa9.85□□□□□ -0.83
CSNK1D-223ENST00000584472 DDTP30046 118 aa9.85□□□□□ -0.83
CSNK1D-223ENST00000584472 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
CSNK1D-223ENST00000584472 PSORS1C2Q9UIG4 136 aa9.85□□□□□ -0.83
CSNK1D-223ENST00000584472 FXYD2P54710 66 aa9.84□□□□□ -0.83
CSNK1D-223ENST00000584472 PKHD1L1Q86WI1 4243 aa9.84□□□□□ -0.83
CSNK1D-223ENST00000584472 OR13C6PQ8NH95 151 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms