RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 C22orf24Q9Y442 160 aa15.23■□□□□ 0.03
MIR3960-201ENST00000583311 ABCA13Q86UQ4 5058 aa15.22■□□□□ 0.03
MIR3960-201ENST00000583311 A0A0U1RRA0 63 aa15.22■□□□□ 0.03
MIR3960-201ENST00000583311 UBE2BP63146 152 aa15.22■□□□□ 0.03
MIR3960-201ENST00000583311 RPL24P83731 157 aaKnown RBP15.21■□□□□ 0.03
MIR3960-201ENST00000583311 NKAPP1Q8N9T2 125 aa15.2■□□□□ 0.02
MIR3960-201ENST00000583311 IGLV5-37A0A075B6J1 123 aa15.19■□□□□ 0.02
MIR3960-201ENST00000583311 MRPL55Q7Z7F7 128 aaKnown RBP15.19■□□□□ 0.02
MIR3960-201ENST00000583311 MIR7-3HGQ8N6C7 128 aa15.18■□□□□ 0.02
MIR3960-201ENST00000583311 PSORS1C2Q9UIG4 136 aa15.18■□□□□ 0.02
MIR3960-201ENST00000583311 ATOH7Q8N100 152 aa15.17■□□□□ 0.02
MIR3960-201ENST00000583311 PCLOQ9Y6V0 5065 aa15.14■□□□□ 0.01
MIR3960-201ENST00000583311 C1orf137Q5JT78 98 aa15.14■□□□□ 0.01
MIR3960-201ENST00000583311 IGKV2D-26A0A0A0MRZ7 120 aa15.13■□□□□ 0.01
MIR3960-201ENST00000583311 A0A0J9YXY3 114 aa15.13■□□□□ 0.01
MIR3960-201ENST00000583311 ZNF815PA8K554 130 aa15.13■□□□□ 0.01
MIR3960-201ENST00000583311 VPREB1P12018 145 aa15.13■□□□□ 0.01
MIR3960-201ENST00000583311 HSBP1L1C9JCN9 74 aa15.12■□□□□ 0.01
MIR3960-201ENST00000583311 ANKRD39Q53RE8 183 aa15.11■□□□□ 0.01
MIR3960-201ENST00000583311 LINC00167Q96N53 147 aa15.11■□□□□ 0.01
MIR3960-201ENST00000583311 SCGB1D1O95968 90 aa15.1■□□□□ 0.01
MIR3960-201ENST00000583311 MIEN1Q9BRT3 115 aa15.1■□□□□ 0.01
MIR3960-201ENST00000583311 HNRNPA3P51991 378 aaKnown RBP15.09■□□□□ 0.01
MIR3960-201ENST00000583311 KRTAP11-1Q8IUC1 163 aa15.09■□□□□ 0.01
MIR3960-201ENST00000583311 BOD1L2Q8IYS8 172 aa15.09■□□□□ 0.01
MIR3960-201ENST00000583311 GAGE10A6NGK3 116 aa15.08■□□□□ 0
MIR3960-201ENST00000583311 TIMM17BO60830 172 aa15.07■□□□□ 0
MIR3960-201ENST00000583311 DAND5Q8N907 189 aa15.07■□□□□ 0
MIR3960-201ENST00000583311 LOC107984156A0A0G2JMH3 177 aa15.06■□□□□ 0
MIR3960-201ENST00000583311 RPL37AP8A6NKH3 93 aa15.06■□□□□ 0
MIR3960-201ENST00000583311 SPINK6Q6UWN8 80 aa15.06■□□□□ 0
MIR3960-201ENST00000583311 ARL17AQ8IVW1 177 aa15.06■□□□□ 0
MIR3960-201ENST00000583311 TTTY13Q9BZ97 58 aa15.05■□□□□ -0
MIR3960-201ENST00000583311 IGLV7-43P04211 117 aa15.04■□□□□ -0
MIR3960-201ENST00000583311 SCGB1D4Q6XE38 83 aa15.04■□□□□ -0
MIR3960-201ENST00000583311 TMA7Q9Y2S6 64 aaKnown RBP15.04■□□□□ -0
MIR3960-201ENST00000583311 M0R378 163 aa15.03■□□□□ -0
MIR3960-201ENST00000583311 Q8NDZ9 215 aa15.03■□□□□ -0
MIR3960-201ENST00000583311 PKHD1L1Q86WI1 4243 aa15.02■□□□□ -0
MIR3960-201ENST00000583311 SRSF9Q13242 221 aaKnown RBP eCLIP15.02■□□□□ -0
MIR3960-201ENST00000583311 ADAMTSL4-AS1Q5T5F5 129 aa15.02■□□□□ -0
MIR3960-201ENST00000583311 IGLV1-50A0A075B6I6 118 aa15□□□□□ -0.01
MIR3960-201ENST00000583311 IGKV2-28A0A075B6P5 120 aa15□□□□□ -0.01
MIR3960-201ENST00000583311 TMEM238C9JI98 176 aa15□□□□□ -0.01
MIR3960-201ENST00000583311 IGKV2D-28P01615 120 aa15□□□□□ -0.01
MIR3960-201ENST00000583311 BCE1O60756 84 aa14.99□□□□□ -0.01
MIR3960-201ENST00000583311 PCP2Q8IVA1 136 aa14.99□□□□□ -0.01
MIR3960-201ENST00000583311 LITAFQ99732 161 aa14.99□□□□□ -0.01
MIR3960-201ENST00000583311 NDUFC2O95298 119 aa14.98□□□□□ -0.01
MIR3960-201ENST00000583311 FLG2Q5D862 2391 aaPredicted RBP14.97□□□□□ -0.01
MIR3960-201ENST00000583311 NCR3O14931 201 aa14.97□□□□□ -0.01
MIR3960-201ENST00000583311 OXTP01178 125 aa14.97□□□□□ -0.01
MIR3960-201ENST00000583311 NPC2P61916 151 aa14.97□□□□□ -0.01
MIR3960-201ENST00000583311 TRBV10-2A0A0K0K1G8 114 aa14.96□□□□□ -0.01
MIR3960-201ENST00000583311 KRTAP29-1A8MX34 341 aaPredicted RBP14.96□□□□□ -0.01
MIR3960-201ENST00000583311 REG3GQ6UW15 175 aa14.96□□□□□ -0.01
MIR3960-201ENST00000583311 COPS9Q8WXC6 57 aa14.96□□□□□ -0.01
MIR3960-201ENST00000583311 DIRC1Q969H9 104 aa14.96□□□□□ -0.01
MIR3960-201ENST00000583311 SPANXB1Q9NS25 103 aaPredicted RBP14.96□□□□□ -0.01
MIR3960-201ENST00000583311 LINC00308Q8TCZ7 52 aa14.95□□□□□ -0.02
MIR3960-201ENST00000583311 MYCBP2O75592 4640 aa14.95□□□□□ -0.02
MIR3960-201ENST00000583311 S100A12P80511 92 aa14.94□□□□□ -0.02
MIR3960-201ENST00000583311 JOSD1Q15040 202 aaPredicted RBP14.94□□□□□ -0.02
MIR3960-201ENST00000583311 SOSTDC1Q6X4U4 206 aa14.94□□□□□ -0.02
MIR3960-201ENST00000583311 SPANXDQ9BXN6 97 aa14.94□□□□□ -0.02
MIR3960-201ENST00000583311 SPANXCQ9NY87 97 aa14.94□□□□□ -0.02
MIR3960-201ENST00000583311 ZNF861PO60384 105 aa14.93□□□□□ -0.02
MIR3960-201ENST00000583311 RPL28P46779 137 aaKnown RBP14.93□□□□□ -0.02
MIR3960-201ENST00000583311 Q6ZVH6 145 aa14.93□□□□□ -0.02
MIR3960-201ENST00000583311 TMEM126AQ9H061 195 aa14.92□□□□□ -0.02
MIR3960-201ENST00000583311 J3QL48 77 aa14.9□□□□□ -0.02
MIR3960-201ENST00000583311 IFITM1P13164 125 aa14.9□□□□□ -0.02
MIR3960-201ENST00000583311 UBE2AP49459 152 aa14.9□□□□□ -0.02
MIR3960-201ENST00000583311 H0Y9J4 135 aa14.89□□□□□ -0.03
MIR3960-201ENST00000583311 PRYO14603 147 aa14.89□□□□□ -0.03
MIR3960-201ENST00000583311 EIF4EBP3O60516 100 aaPredicted RBP14.88□□□□□ -0.03
MIR3960-201ENST00000583311 DDTP30046 118 aa14.88□□□□□ -0.03
MIR3960-201ENST00000583311 S100A7L2Q5SY68 101 aa14.88□□□□□ -0.03
MIR3960-201ENST00000583311 TRBV10-3A0A0K0K1G6 114 aa14.87□□□□□ -0.03
MIR3960-201ENST00000583311 VAMP8Q9BV40 100 aa14.87□□□□□ -0.03
MIR3960-201ENST00000583311 PPDPFQ9H3Y8 114 aa14.87□□□□□ -0.03
MIR3960-201ENST00000583311 KCNQ1DNQ9H478 68 aa14.87□□□□□ -0.03
MIR3960-201ENST00000583311 FAM19A1Q7Z5A9 133 aa14.86□□□□□ -0.03
MIR3960-201ENST00000583311 COX8AP10176 69 aa14.85□□□□□ -0.03
MIR3960-201ENST00000583311 CBY1Q9Y3M2 126 aa14.85□□□□□ -0.03
MIR3960-201ENST00000583311 FAT3Q8TDW7 4589 aa14.84□□□□□ -0.03
MIR3960-201ENST00000583311 LINC00518Q8N0U6 118 aa14.84□□□□□ -0.03
MIR3960-201ENST00000583311 PAM16Q9Y3D7 125 aa14.84□□□□□ -0.03
MIR3960-201ENST00000583311 SPATA45Q537H7 98 aa14.83□□□□□ -0.04
MIR3960-201ENST00000583311 LRP1Q07954 4544 aaKnown RBP14.82□□□□□ -0.04
MIR3960-201ENST00000583311 DLEU1O43261 78 aa14.81□□□□□ -0.04
MIR3960-201ENST00000583311 IGLV6-57P01721 117 aa14.81□□□□□ -0.04
MIR3960-201ENST00000583311 KRTAP13-1Q8IUC0 172 aa14.81□□□□□ -0.04
MIR3960-201ENST00000583311 LINC00337Q8N6G1 96 aa14.81□□□□□ -0.04
MIR3960-201ENST00000583311 LINC01600Q96MT4 127 aa14.81□□□□□ -0.04
MIR3960-201ENST00000583311 SPRR1AP35321 89 aa14.8□□□□□ -0.04
MIR3960-201ENST00000583311 MUSTN1Q8IVN3 82 aa14.8□□□□□ -0.04
MIR3960-201ENST00000583311 PRLHP81277 87 aa14.79□□□□□ -0.04
MIR3960-201ENST00000583311 PYY3Q5JQD4 70 aa14.79□□□□□ -0.04
MIR3960-201ENST00000583311 OR13C6PQ8NH95 151 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms