RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 Q8NDZ9 215 aa9.17□□□□□ -0.94
SREBF1-221ENST00000583080 ATP5LO75964 103 aa9.16□□□□□ -0.94
SREBF1-221ENST00000583080 G0S2P27469 103 aa9.16□□□□□ -0.94
SREBF1-221ENST00000583080 KIAA1644Q3SXP7 199 aa9.16□□□□□ -0.94
SREBF1-221ENST00000583080 KRTAP13-3Q3SY46 172 aa9.16□□□□□ -0.94
SREBF1-221ENST00000583080 S100A2P29034 98 aa9.15□□□□□ -0.94
SREBF1-221ENST00000583080 ASB16-AS1Q495Z4 193 aa9.15□□□□□ -0.94
SREBF1-221ENST00000583080 FP248Q71RG6 208 aaPredicted RBP9.15□□□□□ -0.94
SREBF1-221ENST00000583080 HIGD2AQ9BW72 106 aa9.15□□□□□ -0.94
SREBF1-221ENST00000583080 CST9LQ9H4G1 147 aa9.15□□□□□ -0.94
SREBF1-221ENST00000583080 SND1-IT1Q9HBX3 110 aa9.15□□□□□ -0.94
SREBF1-221ENST00000583080 LINC01547P58512 204 aaPredicted RBP9.14□□□□□ -0.95
SREBF1-221ENST00000583080 SNRPEP62304 92 aaKnown RBP9.14□□□□□ -0.95
SREBF1-221ENST00000583080 ANAPC16Q96DE5 110 aa9.14□□□□□ -0.95
SREBF1-221ENST00000583080 TRAV9-1A0A075B6T8 112 aa9.13□□□□□ -0.95
SREBF1-221ENST00000583080 FABP9Q0Z7S8 132 aa9.13□□□□□ -0.95
SREBF1-221ENST00000583080 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
SREBF1-221ENST00000583080 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
SREBF1-221ENST00000583080 LINC00337Q8N6G1 96 aa9.13□□□□□ -0.95
SREBF1-221ENST00000583080 SPRR4Q96PI1 79 aa9.12□□□□□ -0.95
SREBF1-221ENST00000583080 CRCT1Q9UGL9 99 aa9.12□□□□□ -0.95
SREBF1-221ENST00000583080 FSIP2Q5CZC0 6907 aa9.11□□□□□ -0.95
SREBF1-221ENST00000583080 IGLV5-39A0A0G2JS06 123 aa9.11□□□□□ -0.95
SREBF1-221ENST00000583080 PMVKQ15126 192 aa9.11□□□□□ -0.95
SREBF1-221ENST00000583080 DAND5Q8N907 189 aa9.11□□□□□ -0.95
SREBF1-221ENST00000583080 MRPL18Q9H0U6 180 aaKnown RBP9.11□□□□□ -0.95
SREBF1-221ENST00000583080 ERG28Q9UKR5 140 aa9.11□□□□□ -0.95
SREBF1-221ENST00000583080 H3BRM9 83 aa9.1□□□□□ -0.95
SREBF1-221ENST00000583080 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
SREBF1-221ENST00000583080 Q8NBF4 154 aa9.09□□□□□ -0.95
SREBF1-221ENST00000583080 ZNF625Q96I27 306 aaPredicted RBP9.09□□□□□ -0.95
SREBF1-221ENST00000583080 GNB1LQ9BYB4 327 aa9.09□□□□□ -0.95
SREBF1-221ENST00000583080 LINC01546A6NGU7 62 aa9.08□□□□□ -0.96
SREBF1-221ENST00000583080 IGLC3P0DOY3 106 aa9.08□□□□□ -0.96
SREBF1-221ENST00000583080 COX19Q49B96 90 aa9.08□□□□□ -0.96
SREBF1-221ENST00000583080 ZNF22P17026 224 aaPredicted RBP9.07□□□□□ -0.96
SREBF1-221ENST00000583080 C4orf48Q5BLP8 95 aa9.07□□□□□ -0.96
SREBF1-221ENST00000583080 LINC01549A6NIU2 74 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BKO60814 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BJP06899 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BOP23527 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BBP33778 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BDP58876 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 SEC61BP60468 96 aaKnown RBP9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BCP62807 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST2H2BEQ16778 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BHQ93079 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BNQ99877 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 HIST1H2BMQ99879 126 aa9.05□□□□□ -0.96
SREBF1-221ENST00000583080 PCP4L1A6NKN8 68 aa9.04□□□□□ -0.96
SREBF1-221ENST00000583080 TSTD3H0UI37 97 aa9.04□□□□□ -0.96
SREBF1-221ENST00000583080 COX17Q14061 63 aa9.04□□□□□ -0.96
SREBF1-221ENST00000583080 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
SREBF1-221ENST00000583080 HIST3H2BBQ8N257 126 aa9.03□□□□□ -0.96
SREBF1-221ENST00000583080 NDUFA6P56556 154 aa9.01□□□□□ -0.97
SREBF1-221ENST00000583080 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
SREBF1-221ENST00000583080 FA2HQ7L5A8 372 aa9.01□□□□□ -0.97
SREBF1-221ENST00000583080 A0A096LNJ9 63 aa9□□□□□ -0.97
SREBF1-221ENST00000583080 SPINK1P00995 79 aa9□□□□□ -0.97
SREBF1-221ENST00000583080 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
SREBF1-221ENST00000583080 A0A0U1RRA0 63 aa8.99□□□□□ -0.97
SREBF1-221ENST00000583080 C11orf86A6NJI1 115 aa8.98□□□□□ -0.97
SREBF1-221ENST00000583080 PRYO14603 147 aa8.98□□□□□ -0.97
SREBF1-221ENST00000583080 TRGC2P03986 189 aa8.98□□□□□ -0.97
SREBF1-221ENST00000583080 LINC00158P58513 81 aa8.98□□□□□ -0.97
SREBF1-221ENST00000583080 SMCR5Q8TEV8 140 aa8.98□□□□□ -0.97
SREBF1-221ENST00000583080 SPRR1AP35321 89 aa8.97□□□□□ -0.97
SREBF1-221ENST00000583080 LINC00483Q53H64 154 aa8.97□□□□□ -0.97
SREBF1-221ENST00000583080 PYY3Q5JQD4 70 aa8.97□□□□□ -0.97
SREBF1-221ENST00000583080 Q8N377 158 aa8.97□□□□□ -0.97
SREBF1-221ENST00000583080 LINC00587B1AMM8 73 aa8.96□□□□□ -0.98
SREBF1-221ENST00000583080 KRTAP4-16G5E9R7 235 aaPredicted RBP8.96□□□□□ -0.98
SREBF1-221ENST00000583080 NCR3O14931 201 aa8.96□□□□□ -0.98
SREBF1-221ENST00000583080 MOBPQ13875 183 aa8.96□□□□□ -0.98
SREBF1-221ENST00000583080 XP32Q5T750 250 aa8.96□□□□□ -0.98
SREBF1-221ENST00000583080 KRTAP19-2Q3LHN2 52 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 TMEM170BQ5T4T1 132 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 GAGE2AQ6NT46 116 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 SFTA2Q6UW10 78 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 URB1-AS1Q96HZ7 61 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 HIST1H2BLQ99880 126 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 NDUFA12Q9UI09 145 aa8.95□□□□□ -0.98
SREBF1-221ENST00000583080 IGLV9-49A0A0B4J1Y8 123 aa8.94□□□□□ -0.98
SREBF1-221ENST00000583080 PMCHL1Q16048 86 aa8.94□□□□□ -0.98
SREBF1-221ENST00000583080 KCNQ1DNQ9H478 68 aa8.94□□□□□ -0.98
SREBF1-221ENST00000583080 ETDCA0A1B0GVM5 59 aa8.93□□□□□ -0.98
SREBF1-221ENST00000583080 DDTP30046 118 aa8.93□□□□□ -0.98
SREBF1-221ENST00000583080 RPS29P62273 56 aaKnown RBP8.93□□□□□ -0.98
SREBF1-221ENST00000583080 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
SREBF1-221ENST00000583080 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
SREBF1-221ENST00000583080 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
SREBF1-221ENST00000583080 SMIM13P0DJ93 91 aa8.92□□□□□ -0.98
SREBF1-221ENST00000583080 MT1HP80294 61 aa8.92□□□□□ -0.98
SREBF1-221ENST00000583080 BAGE3Q86Y29 109 aa8.92□□□□□ -0.98
SREBF1-221ENST00000583080 TRBV10-3A0A0K0K1G6 114 aa8.91□□□□□ -0.98
SREBF1-221ENST00000583080 HBDP02042 147 aa8.91□□□□□ -0.98
SREBF1-221ENST00000583080 FABP4P15090 132 aa8.9□□□□□ -0.98
SREBF1-221ENST00000583080 SLC25A20O43772 301 aa8.89□□□□□ -0.99
SREBF1-221ENST00000583080 MIR7-3HGQ8N6C7 128 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms