RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 IGKV2D-24A0A075B6R9 120 aa15.13■□□□□ 0.01
CCDC47-204ENST00000582252 LINC00526Q96FQ7 95 aa15.13■□□□□ 0.01
CCDC47-204ENST00000582252 C2orf48Q96LS8 159 aa15.13■□□□□ 0.01
CCDC47-204ENST00000582252 CAMK2N2Q96S95 79 aa15.12■□□□□ 0.01
CCDC47-204ENST00000582252 LINC00588Q9Y4M8 146 aa15.12■□□□□ 0.01
CCDC47-204ENST00000582252 TMEM126AQ9H061 195 aa15.12■□□□□ 0.01
CCDC47-204ENST00000582252 TGP01266 2768 aa15.1■□□□□ 0.01
CCDC47-204ENST00000582252 C6orf48Q9UBA6 75 aa15.1■□□□□ 0.01
CCDC47-204ENST00000582252 HIGD2BQ4VC39 106 aa15.09■□□□□ 0.01
CCDC47-204ENST00000582252 C15orf56Q8N910 161 aa15.09■□□□□ 0.01
CCDC47-204ENST00000582252 UPK3BQ9BT76 320 aa15.08■□□□□ 0
CCDC47-204ENST00000582252 RMI2Q96E14 147 aa15.07■□□□□ 0
CCDC47-204ENST00000582252 DNAL4O96015 105 aa15.06■□□□□ 0
CCDC47-204ENST00000582252 NUPR2A6NF83 97 aa15.06■□□□□ 0
CCDC47-204ENST00000582252 FAM218AQ96MZ4 157 aa15.06■□□□□ 0
CCDC47-204ENST00000582252 CSMD3Q7Z407 3707 aa15.06■□□□□ 0
CCDC47-204ENST00000582252 S100A7L2Q5SY68 101 aa15.05■□□□□ -0
CCDC47-204ENST00000582252 Q9HAA7 133 aa15.05■□□□□ -0
CCDC47-204ENST00000582252 NCR3O14931 201 aa15.03■□□□□ -0
CCDC47-204ENST00000582252 PRR3P79522 188 aaKnown RBP15.03■□□□□ -0
CCDC47-204ENST00000582252 TEX49A0A1B0GTD5 131 aa15.01□□□□□ -0.01
CCDC47-204ENST00000582252 Q6ZRU5 148 aa15.01□□□□□ -0.01
CCDC47-204ENST00000582252 A0A1B0GX51 115 aa15□□□□□ -0.01
CCDC47-204ENST00000582252 BAALC-AS2P0C853 105 aa15□□□□□ -0.01
CCDC47-204ENST00000582252 PLECQ15149 4684 aaKnown RBP15□□□□□ -0.01
CCDC47-204ENST00000582252 NDUFC2-KCTD14E9PQ53 114 aa14.99□□□□□ -0.01
CCDC47-204ENST00000582252 A0A087WYN8 130 aa14.98□□□□□ -0.01
CCDC47-204ENST00000582252 SNCGO76070 127 aa14.97□□□□□ -0.01
CCDC47-204ENST00000582252 SYCNQ0VAF6 134 aa14.97□□□□□ -0.01
CCDC47-204ENST00000582252 SIGMAR1Q99720 223 aa14.97□□□□□ -0.01
CCDC47-204ENST00000582252 STARD9Q9P2P6 4700 aa14.97□□□□□ -0.01
CCDC47-204ENST00000582252 Q8NDZ9 215 aa14.97□□□□□ -0.01
CCDC47-204ENST00000582252 APLNQ9ULZ1 77 aa14.96□□□□□ -0.01
CCDC47-204ENST00000582252 LECT2O14960 151 aa14.95□□□□□ -0.02
CCDC47-204ENST00000582252 RPL18AQ02543 176 aaKnown RBP14.95□□□□□ -0.02
CCDC47-204ENST00000582252 XAGE1AQ9HD64 81 aa14.95□□□□□ -0.02
CCDC47-204ENST00000582252 IGLV6-57P01721 117 aa14.94□□□□□ -0.02
CCDC47-204ENST00000582252 TENM2Q9NT68 2774 aa14.94□□□□□ -0.02
CCDC47-204ENST00000582252 C6orf99Q4VX62 202 aa14.92□□□□□ -0.02
CCDC47-204ENST00000582252 WWC2-AS2Q96NR7 200 aa14.92□□□□□ -0.02
CCDC47-204ENST00000582252 CDIP1Q9H305 208 aa14.91□□□□□ -0.02
CCDC47-204ENST00000582252 UBE2DNLQ8IWF7 75 aa14.9□□□□□ -0.02
CCDC47-204ENST00000582252 USP17L23D6RBM5 183 aa14.89□□□□□ -0.03
CCDC47-204ENST00000582252 INAFM2P0DMQ5 153 aa14.89□□□□□ -0.03
CCDC47-204ENST00000582252 ORMDL1Q9P0S3 153 aa14.89□□□□□ -0.03
CCDC47-204ENST00000582252 LYSTQ99698 3801 aa14.89□□□□□ -0.03
CCDC47-204ENST00000582252 FAM240AA0A1B0GVK7 77 aa14.88□□□□□ -0.03
CCDC47-204ENST00000582252 VPREB1P12018 145 aa14.88□□□□□ -0.03
CCDC47-204ENST00000582252 LINC00167Q96N53 147 aa14.88□□□□□ -0.03
CCDC47-204ENST00000582252 M0R378 163 aa14.87□□□□□ -0.03
CCDC47-204ENST00000582252 PCP4P48539 62 aa14.87□□□□□ -0.03
CCDC47-204ENST00000582252 GAGE2EQ4V326 116 aa14.87□□□□□ -0.03
CCDC47-204ENST00000582252 Q8N814 137 aa14.87□□□□□ -0.03
CCDC47-204ENST00000582252 GAGE2DQ9UEU5 116 aa14.87□□□□□ -0.03
CCDC47-204ENST00000582252 TRAV23DV6A0A075B6W5 121 aa14.86□□□□□ -0.03
CCDC47-204ENST00000582252 TLX1NBP0CAT3 122 aa14.86□□□□□ -0.03
CCDC47-204ENST00000582252 Q6ZRP5 223 aa14.86□□□□□ -0.03
CCDC47-204ENST00000582252 TRBV10-3A0A0K0K1G6 114 aa14.85□□□□□ -0.03
CCDC47-204ENST00000582252 DIRC1Q969H9 104 aa14.84□□□□□ -0.03
CCDC47-204ENST00000582252 C22orf24Q9Y442 160 aa14.84□□□□□ -0.03
CCDC47-204ENST00000582252 ACYP1P07311 99 aa14.83□□□□□ -0.03
CCDC47-204ENST00000582252 LINC00575Q6W349 94 aa14.83□□□□□ -0.04
CCDC47-204ENST00000582252 VPS13DQ5THJ4 4388 aa14.82□□□□□ -0.04
CCDC47-204ENST00000582252 SCGB1A1P11684 91 aa14.82□□□□□ -0.04
CCDC47-204ENST00000582252 CASC10Q5T4H9 136 aa14.8□□□□□ -0.04
CCDC47-204ENST00000582252 TRBV7-6A0A0J9YX20 115 aa14.8□□□□□ -0.04
CCDC47-204ENST00000582252 TMEM256-PLSCR3K7ERE1 68 aa14.8□□□□□ -0.04
CCDC47-204ENST00000582252 SLPIP03973 132 aa14.8□□□□□ -0.04
CCDC47-204ENST00000582252 hADV29S1A0JD25 119 aa14.79□□□□□ -0.04
CCDC47-204ENST00000582252 DNAH1Q9P2D7 4330 aa14.79□□□□□ -0.04
CCDC47-204ENST00000582252 ZNF73O43830 326 aaPredicted RBP14.78□□□□□ -0.04
CCDC47-204ENST00000582252 H3BQ85 93 aa14.78□□□□□ -0.04
CCDC47-204ENST00000582252 XGP55808 180 aa14.78□□□□□ -0.04
CCDC47-204ENST00000582252 NKAPP1Q8N9T2 125 aa14.78□□□□□ -0.04
CCDC47-204ENST00000582252 PLA2G2DQ9UNK4 145 aa14.78□□□□□ -0.04
CCDC47-204ENST00000582252 C9orf129Q5T035 196 aaKnown RBP14.77□□□□□ -0.05
CCDC47-204ENST00000582252 OBSCN-AS1Q96MR7 158 aa14.76□□□□□ -0.05
CCDC47-204ENST00000582252 COX7BP24311 80 aa14.75□□□□□ -0.05
CCDC47-204ENST00000582252 C3orf84H3BNL1 204 aa14.75□□□□□ -0.05
CCDC47-204ENST00000582252 PSCAO43653 123 aa14.75□□□□□ -0.05
CCDC47-204ENST00000582252 JMJD7-PLA2G4BH0Y9G9 81 aa14.74□□□□□ -0.05
CCDC47-204ENST00000582252 TTC32Q5I0X7 151 aa14.74□□□□□ -0.05
CCDC47-204ENST00000582252 LOC107984640A0A0U1RRK4 108 aa14.73□□□□□ -0.05
CCDC47-204ENST00000582252 GHRHP01286 108 aa14.73□□□□□ -0.05
CCDC47-204ENST00000582252 MT-ATP8P03928 68 aa14.73□□□□□ -0.05
CCDC47-204ENST00000582252 ELOF1P60002 83 aaKnown RBP14.72□□□□□ -0.05
CCDC47-204ENST00000582252 KRTAP1-5Q9BYS1 174 aa14.72□□□□□ -0.05
CCDC47-204ENST00000582252 C14orf177Q52M58 125 aa14.71□□□□□ -0.05
CCDC47-204ENST00000582252 IGLV5-37A0A075B6J1 123 aa14.69□□□□□ -0.06
CCDC47-204ENST00000582252 GAGE2AQ6NT46 116 aa14.68□□□□□ -0.06
CCDC47-204ENST00000582252 C14orf132Q9NPU4 83 aa14.68□□□□□ -0.06
CCDC47-204ENST00000582252 GAGE2BQ13066 116 aa14.67□□□□□ -0.06
CCDC47-204ENST00000582252 SERTAD4-AS1Q5TG53 156 aa14.67□□□□□ -0.06
CCDC47-204ENST00000582252 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.67□□□□□ -0.06
CCDC47-204ENST00000582252 ALMS1Q8TCU4 4167 aa14.66□□□□□ -0.06
CCDC47-204ENST00000582252 KCNQ1DNQ9H478 68 aa14.66□□□□□ -0.06
CCDC47-204ENST00000582252 CNBPP62633 177 aaKnown RBP14.65□□□□□ -0.06
CCDC47-204ENST00000582252 C7orf33Q8WU49 177 aa14.65□□□□□ -0.06
CCDC47-204ENST00000582252 Q6ZQY7 126 aa14.64□□□□□ -0.07
CCDC47-204ENST00000582252 C21orf62-AS1Q17RA5 79 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 549.5 ms