RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 C2orf66Q6UXQ4 117 aa5.59□□□□□ -1.51
GGA3-206ENST00000578773 LGALS3P17931 250 aaKnown RBP5.58□□□□□ -1.52
GGA3-206ENST00000578773 C9orf153Q5TBE3 101 aa5.58□□□□□ -1.52
GGA3-206ENST00000578773 MRPL54Q6P161 138 aaKnown RBP5.58□□□□□ -1.52
GGA3-206ENST00000578773 HERVK_113P63121 156 aa5.57□□□□□ -1.52
GGA3-206ENST00000578773 SMIM27A0A1W2PRY6 76 aa5.56□□□□□ -1.52
GGA3-206ENST00000578773 F8W036 122 aa5.56□□□□□ -1.52
GGA3-206ENST00000578773 TMEM136Q6ZRR5 245 aa5.56□□□□□ -1.52
GGA3-206ENST00000578773 ORMDL3Q8N138 153 aa5.56□□□□□ -1.52
GGA3-206ENST00000578773 PRELID3AQ96N28 172 aa5.56□□□□□ -1.52
GGA3-206ENST00000578773 CYSLTR1Q9Y271 337 aa5.56□□□□□ -1.52
GGA3-206ENST00000578773 A0A1B0GW15 77 aa5.55□□□□□ -1.52
GGA3-206ENST00000578773 PPBPP02775 128 aa5.55□□□□□ -1.52
GGA3-206ENST00000578773 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
GGA3-206ENST00000578773 SPINK8P0C7L1 97 aa5.55□□□□□ -1.52
GGA3-206ENST00000578773 RGS21Q2M5E4 152 aa5.55□□□□□ -1.52
GGA3-206ENST00000578773 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
GGA3-206ENST00000578773 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
GGA3-206ENST00000578773 SPRR1AP35321 89 aa5.54□□□□□ -1.52
GGA3-206ENST00000578773 SEC11AP67812 179 aa5.54□□□□□ -1.52
GGA3-206ENST00000578773 RPL23P62829 140 aaKnown RBP5.53□□□□□ -1.52
GGA3-206ENST00000578773 RPL24P83731 157 aaKnown RBP5.53□□□□□ -1.52
GGA3-206ENST00000578773 ADIRFQ15847 76 aa5.53□□□□□ -1.52
GGA3-206ENST00000578773 PDZD11Q5EBL8 140 aa5.53□□□□□ -1.52
GGA3-206ENST00000578773 SLC51BQ86UW2 128 aa5.53□□□□□ -1.52
GGA3-206ENST00000578773 Q9BRP9 147 aa5.53□□□□□ -1.52
GGA3-206ENST00000578773 A0A1B0GXF2 115 aa5.52□□□□□ -1.53
GGA3-206ENST00000578773 PRYO14603 147 aa5.52□□□□□ -1.53
GGA3-206ENST00000578773 S100A8P05109 93 aa5.52□□□□□ -1.53
GGA3-206ENST00000578773 SRP19P09132 144 aaKnown RBP5.52□□□□□ -1.53
GGA3-206ENST00000578773 MAP1LC3AQ9H492 121 aa5.52□□□□□ -1.53
GGA3-206ENST00000578773 GPR98Q8WXG9 6306 aa5.51□□□□□ -1.53
GGA3-206ENST00000578773 C20orf202A1L168 122 aa5.51□□□□□ -1.53
GGA3-206ENST00000578773 ATP5LO75964 103 aa5.51□□□□□ -1.53
GGA3-206ENST00000578773 BLOC1S1P78537 153 aa5.51□□□□□ -1.53
GGA3-206ENST00000578773 ALKAL2Q6UX46 152 aa5.51□□□□□ -1.53
GGA3-206ENST00000578773 Q8N8P6 123 aa5.51□□□□□ -1.53
GGA3-206ENST00000578773 ETDCA0A1B0GVM5 59 aa5.5□□□□□ -1.53
GGA3-206ENST00000578773 PRSS47A8MTI9 375 aa5.5□□□□□ -1.53
GGA3-206ENST00000578773 H7C2G1 150 aa5.5□□□□□ -1.53
GGA3-206ENST00000578773 ORMDL2Q53FV1 153 aa5.5□□□□□ -1.53
GGA3-206ENST00000578773 ZNF625Q96I27 306 aaPredicted RBP5.5□□□□□ -1.53
GGA3-206ENST00000578773 LIMD2Q9BT23 127 aa5.5□□□□□ -1.53
GGA3-206ENST00000578773 ERG28Q9UKR5 140 aa5.5□□□□□ -1.53
GGA3-206ENST00000578773 B5MCH6 92 aa5.49□□□□□ -1.53
GGA3-206ENST00000578773 NCR3O14931 201 aa5.49□□□□□ -1.53
GGA3-206ENST00000578773 PAPPA-AS1Q5QFB9 102 aa5.49□□□□□ -1.53
GGA3-206ENST00000578773 TINCRA0A1B0GVN0 87 aa5.48□□□□□ -1.53
GGA3-206ENST00000578773 C1orf195Q5TG92 126 aa5.48□□□□□ -1.53
GGA3-206ENST00000578773 ST20-AS1Q8NBB2 130 aa5.48□□□□□ -1.53
GGA3-206ENST00000578773 IGLV5-45A0A087WSX0 123 aa5.47□□□□□ -1.53
GGA3-206ENST00000578773 ADCYAP1P18509 176 aa5.47□□□□□ -1.53
GGA3-206ENST00000578773 KCNQ1DNQ9H478 68 aa5.47□□□□□ -1.53
GGA3-206ENST00000578773 NAT8Q9UHE5 227 aa5.47□□□□□ -1.53
GGA3-206ENST00000578773 C20orf166-AS1Q96NR2 134 aa5.46□□□□□ -1.54
GGA3-206ENST00000578773 SCGB3A1Q96QR1 104 aa5.46□□□□□ -1.54
GGA3-206ENST00000578773 LAMTOR2Q9Y2Q5 125 aa5.46□□□□□ -1.54
GGA3-206ENST00000578773 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
GGA3-206ENST00000578773 C9JQL5 133 aa5.45□□□□□ -1.54
GGA3-206ENST00000578773 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
GGA3-206ENST00000578773 TOMM6Q96B49 74 aa5.45□□□□□ -1.54
GGA3-206ENST00000578773 ERASQ7Z444 233 aa5.44□□□□□ -1.54
GGA3-206ENST00000578773 CST9LQ9H4G1 147 aa5.44□□□□□ -1.54
GGA3-206ENST00000578773 A0A0U1RRA0 63 aa5.43□□□□□ -1.54
GGA3-206ENST00000578773 K7EMI3 77 aa5.43□□□□□ -1.54
GGA3-206ENST00000578773 COX17Q14061 63 aa5.43□□□□□ -1.54
GGA3-206ENST00000578773 ATP5L2Q7Z4Y8 100 aa5.43□□□□□ -1.54
GGA3-206ENST00000578773 NXT2Q9NPJ8 142 aaKnown RBP5.43□□□□□ -1.54
GGA3-206ENST00000578773 H3BRM9 83 aa5.42□□□□□ -1.54
GGA3-206ENST00000578773 G0S2P27469 103 aa5.42□□□□□ -1.54
GGA3-206ENST00000578773 MRPL18Q9H0U6 180 aaKnown RBP5.42□□□□□ -1.54
GGA3-206ENST00000578773 A0A0G2JQZ4 141 aa5.41□□□□□ -1.54
GGA3-206ENST00000578773 LINC00158P58513 81 aa5.41□□□□□ -1.54
GGA3-206ENST00000578773 TCTE3Q8IZS6 198 aa5.41□□□□□ -1.54
GGA3-206ENST00000578773 IGLV5-39A0A0G2JS06 123 aa5.4□□□□□ -1.54
GGA3-206ENST00000578773 Q6ZRX8 168 aa5.4□□□□□ -1.54
GGA3-206ENST00000578773 TRAV9-1A0A075B6T8 112 aa5.39□□□□□ -1.55
GGA3-206ENST00000578773 PMVKQ15126 192 aa5.39□□□□□ -1.55
GGA3-206ENST00000578773 ATP11AUNQ6ZP68 121 aa5.39□□□□□ -1.55
GGA3-206ENST00000578773 SMIM29Q86T20 159 aa5.39□□□□□ -1.55
GGA3-206ENST00000578773 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
GGA3-206ENST00000578773 NDUFA6P56556 154 aa5.38□□□□□ -1.55
GGA3-206ENST00000578773 BOD1L2Q8IYS8 172 aa5.38□□□□□ -1.55
GGA3-206ENST00000578773 Q1RN00 199 aa5.37□□□□□ -1.55
GGA3-206ENST00000578773 ZNF22P17026 224 aaPredicted RBP5.36□□□□□ -1.55
GGA3-206ENST00000578773 Q75L30 129 aa5.36□□□□□ -1.55
GGA3-206ENST00000578773 FAM236DA0A1B0GTK5 79 aa5.35□□□□□ -1.55
GGA3-206ENST00000578773 IGLC3P0DOY3 106 aa5.35□□□□□ -1.55
GGA3-206ENST00000578773 FAM236CP0DP71 79 aa5.35□□□□□ -1.55
GGA3-206ENST00000578773 PEA15Q15121 130 aa5.35□□□□□ -1.55
GGA3-206ENST00000578773 OBSCN-AS1Q96MR7 158 aa5.35□□□□□ -1.55
GGA3-206ENST00000578773 ATP6V1G1O75348 118 aa5.34□□□□□ -1.55
GGA3-206ENST00000578773 SMIM13P0DJ93 91 aa5.34□□□□□ -1.55
GGA3-206ENST00000578773 TRBV20-1A0A075B6N2 111 aa5.33□□□□□ -1.56
GGA3-206ENST00000578773 Q5XG85 94 aa5.33□□□□□ -1.56
GGA3-206ENST00000578773 S100A12P80511 92 aa5.32□□□□□ -1.56
GGA3-206ENST00000578773 TMEM170BQ5T4T1 132 aa5.32□□□□□ -1.56
GGA3-206ENST00000578773 KRTAP2-2Q9BYT5 123 aa5.32□□□□□ -1.56
GGA3-206ENST00000578773 KRTAP2-1Q9BYU5 128 aa5.32□□□□□ -1.56
GGA3-206ENST00000578773 SPRR1BP22528 89 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms