RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 NDUFA12Q9UI09 145 aa9.62□□□□□ -0.87
IFT20-206ENST00000578122 C20orf202A1L168 122 aa9.61□□□□□ -0.87
IFT20-206ENST00000578122 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
IFT20-206ENST00000578122 HERV-K104P63124 156 aa9.61□□□□□ -0.87
IFT20-206ENST00000578122 PHF5AQ7RTV0 110 aaKnown RBP9.61□□□□□ -0.87
IFT20-206ENST00000578122 KRTAP7-1Q8IUC3 87 aa9.61□□□□□ -0.87
IFT20-206ENST00000578122 HIST1H2BLQ99880 126 aa9.61□□□□□ -0.87
IFT20-206ENST00000578122 MYMXA0A1B0GTQ4 84 aa9.6□□□□□ -0.87
IFT20-206ENST00000578122 J3QQQ9 107 aa9.6□□□□□ -0.87
IFT20-206ENST00000578122 LGALS3P17931 250 aaKnown RBP9.6□□□□□ -0.87
IFT20-206ENST00000578122 SNRPEP62304 92 aaKnown RBP9.6□□□□□ -0.87
IFT20-206ENST00000578122 E9PLD3 99 aa9.59□□□□□ -0.87
IFT20-206ENST00000578122 M0QXV9 152 aa9.59□□□□□ -0.87
IFT20-206ENST00000578122 LINC00158P58513 81 aa9.59□□□□□ -0.87
IFT20-206ENST00000578122 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
IFT20-206ENST00000578122 MEIG1Q5JSS6 88 aa9.58□□□□□ -0.88
IFT20-206ENST00000578122 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
IFT20-206ENST00000578122 FAT1Q14517 4588 aa9.58□□□□□ -0.88
IFT20-206ENST00000578122 A0A0U1RRA0 63 aa9.57□□□□□ -0.88
IFT20-206ENST00000578122 C5orf52A6NGY3 159 aa9.57□□□□□ -0.88
IFT20-206ENST00000578122 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
IFT20-206ENST00000578122 NMUP48645 174 aa9.57□□□□□ -0.88
IFT20-206ENST00000578122 KRTAP4-7Q9BYR0 210 aa9.57□□□□□ -0.88
IFT20-206ENST00000578122 PLA2G2DQ9UNK4 145 aa9.57□□□□□ -0.88
IFT20-206ENST00000578122 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
IFT20-206ENST00000578122 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
IFT20-206ENST00000578122 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
IFT20-206ENST00000578122 AKR1D1P51857 326 aa9.55□□□□□ -0.88
IFT20-206ENST00000578122 UBE2BP63146 152 aa9.54□□□□□ -0.88
IFT20-206ENST00000578122 LBHQ53QV2 105 aaPredicted RBP9.54□□□□□ -0.88
IFT20-206ENST00000578122 ATOH7Q8N100 152 aa9.54□□□□□ -0.88
IFT20-206ENST00000578122 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
IFT20-206ENST00000578122 PSORS1C2Q9UIG4 136 aa9.53□□□□□ -0.88
IFT20-206ENST00000578122 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.88
IFT20-206ENST00000578122 IGLV5-37A0A075B6J1 123 aa9.52□□□□□ -0.89
IFT20-206ENST00000578122 IGKV2D-26A0A0A0MRZ7 120 aa9.52□□□□□ -0.89
IFT20-206ENST00000578122 HNRNPA3P51991 378 aaKnown RBP9.52□□□□□ -0.89
IFT20-206ENST00000578122 MRPL55Q7Z7F7 128 aaKnown RBP9.52□□□□□ -0.89
IFT20-206ENST00000578122 KRTAP11-1Q8IUC1 163 aa9.52□□□□□ -0.89
IFT20-206ENST00000578122 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
IFT20-206ENST00000578122 NKAPP1Q8N9T2 125 aa9.52□□□□□ -0.89
IFT20-206ENST00000578122 RPL24P83731 157 aaKnown RBP9.51□□□□□ -0.89
IFT20-206ENST00000578122 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
IFT20-206ENST00000578122 VPREB1P12018 145 aa9.5□□□□□ -0.89
IFT20-206ENST00000578122 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
IFT20-206ENST00000578122 GAGE10A6NGK3 116 aa9.49□□□□□ -0.89
IFT20-206ENST00000578122 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
IFT20-206ENST00000578122 LINC00167Q96N53 147 aa9.49□□□□□ -0.89
IFT20-206ENST00000578122 VPS13BQ7Z7G8 4022 aa9.49□□□□□ -0.89
IFT20-206ENST00000578122 SRRM2Q9UQ35 2752 aaKnown RBP9.48□□□□□ -0.89
IFT20-206ENST00000578122 ZNF815PA8K554 130 aa9.48□□□□□ -0.89
IFT20-206ENST00000578122 DAND5Q8N907 189 aa9.48□□□□□ -0.89
IFT20-206ENST00000578122 Q8NDZ9 215 aa9.48□□□□□ -0.89
IFT20-206ENST00000578122 BOD1L2Q8IYS8 172 aa9.47□□□□□ -0.89
IFT20-206ENST00000578122 TTTY13Q9BZ97 58 aa9.47□□□□□ -0.89
IFT20-206ENST00000578122 RPL37AP8A6NKH3 93 aa9.46□□□□□ -0.9
IFT20-206ENST00000578122 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
IFT20-206ENST00000578122 IGLV7-43P04211 117 aa9.45□□□□□ -0.9
IFT20-206ENST00000578122 LOC107984156A0A0G2JMH3 177 aa9.44□□□□□ -0.9
IFT20-206ENST00000578122 HSBP1L1C9JCN9 74 aa9.44□□□□□ -0.9
IFT20-206ENST00000578122 TIMM17BO60830 172 aa9.44□□□□□ -0.9
IFT20-206ENST00000578122 SRSF9Q13242 221 aaKnown RBP eCLIP9.44□□□□□ -0.9
IFT20-206ENST00000578122 ADAMTSL4-AS1Q5T5F5 129 aa9.44□□□□□ -0.9
IFT20-206ENST00000578122 ARL17AQ8IVW1 177 aa9.44□□□□□ -0.9
IFT20-206ENST00000578122 TMA7Q9Y2S6 64 aaKnown RBP9.44□□□□□ -0.9
IFT20-206ENST00000578122 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
IFT20-206ENST00000578122 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
IFT20-206ENST00000578122 M0R378 163 aa9.42□□□□□ -0.9
IFT20-206ENST00000578122 PCP2Q8IVA1 136 aa9.42□□□□□ -0.9
IFT20-206ENST00000578122 LITAFQ99732 161 aa9.42□□□□□ -0.9
IFT20-206ENST00000578122 MIEN1Q9BRT3 115 aa9.42□□□□□ -0.9
IFT20-206ENST00000578122 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
IFT20-206ENST00000578122 IGKV2-28A0A075B6P5 120 aa9.41□□□□□ -0.9
IFT20-206ENST00000578122 IGKV2D-28P01615 120 aa9.41□□□□□ -0.9
IFT20-206ENST00000578122 NPC2P61916 151 aa9.41□□□□□ -0.9
IFT20-206ENST00000578122 LCE4AQ5TA78 99 aa9.41□□□□□ -0.9
IFT20-206ENST00000578122 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
IFT20-206ENST00000578122 H3BS24 57 aa9.4□□□□□ -0.9
IFT20-206ENST00000578122 NCR3O14931 201 aa9.4□□□□□ -0.9
IFT20-206ENST00000578122 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
IFT20-206ENST00000578122 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
IFT20-206ENST00000578122 BCE1O60756 84 aa9.39□□□□□ -0.91
IFT20-206ENST00000578122 OXTP01178 125 aa9.39□□□□□ -0.91
IFT20-206ENST00000578122 KRTAP19-4Q3LI73 84 aa9.38□□□□□ -0.91
IFT20-206ENST00000578122 LINC00308Q8TCZ7 52 aa9.38□□□□□ -0.91
IFT20-206ENST00000578122 KRTAP4-9Q9BYQ8 210 aa9.38□□□□□ -0.91
IFT20-206ENST00000578122 TMEM238C9JI98 176 aa9.37□□□□□ -0.91
IFT20-206ENST00000578122 NDUFC2O95298 119 aa9.37□□□□□ -0.91
IFT20-206ENST00000578122 REG3GQ6UW15 175 aa9.37□□□□□ -0.91
IFT20-206ENST00000578122 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
IFT20-206ENST00000578122 TRBV10-2A0A0K0K1G8 114 aa9.36□□□□□ -0.91
IFT20-206ENST00000578122 ZNF861PO60384 105 aa9.36□□□□□ -0.91
IFT20-206ENST00000578122 JOSD1Q15040 202 aaPredicted RBP9.36□□□□□ -0.91
IFT20-206ENST00000578122 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
IFT20-206ENST00000578122 RPL28P46779 137 aaKnown RBP9.35□□□□□ -0.91
IFT20-206ENST00000578122 SPANXDQ9BXN6 97 aa9.35□□□□□ -0.91
IFT20-206ENST00000578122 TMEM126AQ9H061 195 aa9.35□□□□□ -0.91
IFT20-206ENST00000578122 SPANXCQ9NY87 97 aa9.35□□□□□ -0.91
IFT20-206ENST00000578122 TRBV10-3A0A0K0K1G6 114 aa9.34□□□□□ -0.91
IFT20-206ENST00000578122 PKHD1L1Q86WI1 4243 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms