RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 FAT4Q6V0I7 4981 aa6.86□□□□□ -1.31
CDH8-202ENST00000577228 IGKV2D-26A0A0A0MRZ7 120 aa6.85□□□□□ -1.31
CDH8-202ENST00000577228 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
CDH8-202ENST00000577228 TPRXLQ17RH7 258 aa6.85□□□□□ -1.31
CDH8-202ENST00000577228 FAM19A2Q8N3H0 131 aa6.85□□□□□ -1.31
CDH8-202ENST00000577228 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
CDH8-202ENST00000577228 IGKV2-28A0A075B6P5 120 aa6.84□□□□□ -1.31
CDH8-202ENST00000577228 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
CDH8-202ENST00000577228 HSBP1O75506 76 aa6.84□□□□□ -1.31
CDH8-202ENST00000577228 IGKV2D-28P01615 120 aa6.84□□□□□ -1.31
CDH8-202ENST00000577228 LINC01549A6NIU2 74 aa6.83□□□□□ -1.32
CDH8-202ENST00000577228 SPINK8P0C7L1 97 aa6.83□□□□□ -1.32
CDH8-202ENST00000577228 KRTAP9-6A0A140TA67 174 aa6.82□□□□□ -1.32
CDH8-202ENST00000577228 ATP5LO75964 103 aa6.82□□□□□ -1.32
CDH8-202ENST00000577228 NDUFA6P56556 154 aa6.82□□□□□ -1.32
CDH8-202ENST00000577228 PRLHP81277 87 aa6.82□□□□□ -1.32
CDH8-202ENST00000577228 COA6Q5JTJ3 125 aaKnown RBP6.82□□□□□ -1.32
CDH8-202ENST00000577228 CTAG1AP78358 180 aa6.81□□□□□ -1.32
CDH8-202ENST00000577228 FAM19A1Q7Z5A9 133 aa6.81□□□□□ -1.32
CDH8-202ENST00000577228 CST9LQ9H4G1 147 aa6.81□□□□□ -1.32
CDH8-202ENST00000577228 PFN2P35080 140 aa6.8□□□□□ -1.32
CDH8-202ENST00000577228 PMVKQ15126 192 aa6.8□□□□□ -1.32
CDH8-202ENST00000577228 TMEM126AQ9H061 195 aa6.8□□□□□ -1.32
CDH8-202ENST00000577228 TMEM238C9JI98 176 aa6.79□□□□□ -1.32
CDH8-202ENST00000577228 H3BRM9 83 aa6.79□□□□□ -1.32
CDH8-202ENST00000577228 VPREB1P12018 145 aa6.79□□□□□ -1.32
CDH8-202ENST00000577228 FABP4P15090 132 aa6.79□□□□□ -1.32
CDH8-202ENST00000577228 IFI27L1Q96BM0 104 aa6.79□□□□□ -1.32
CDH8-202ENST00000577228 MUC17Q685J3 4493 aa6.79□□□□□ -1.32
CDH8-202ENST00000577228 LEPROTL1O95214 131 aa6.78□□□□□ -1.32
CDH8-202ENST00000577228 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
CDH8-202ENST00000577228 PPDPFQ9H3Y8 114 aa6.78□□□□□ -1.32
CDH8-202ENST00000577228 SND1-IT1Q9HBX3 110 aa6.78□□□□□ -1.32
CDH8-202ENST00000577228 M0R378 163 aa6.77□□□□□ -1.33
CDH8-202ENST00000577228 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
CDH8-202ENST00000577228 PLEKHB2Q96CS7 222 aa6.77□□□□□ -1.33
CDH8-202ENST00000577228 HSPB8Q9UJY1 196 aa6.76□□□□□ -1.33
CDH8-202ENST00000577228 ERG28Q9UKR5 140 aa6.76□□□□□ -1.33
CDH8-202ENST00000577228 TRAV12-1A0A0B4J245 112 aa6.75□□□□□ -1.33
CDH8-202ENST00000577228 IGLV5-39A0A0G2JS06 123 aa6.75□□□□□ -1.33
CDH8-202ENST00000577228 H0Y8G0 127 aa6.75□□□□□ -1.33
CDH8-202ENST00000577228 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
CDH8-202ENST00000577228 SPAG11AQ6PDA7 123 aa6.75□□□□□ -1.33
CDH8-202ENST00000577228 HIGD2AQ9BW72 106 aa6.75□□□□□ -1.33
CDH8-202ENST00000577228 CHTOPQ9Y3Y2 248 aaKnown RBP6.75□□□□□ -1.33
CDH8-202ENST00000577228 C11orf86A6NJI1 115 aa6.74□□□□□ -1.33
CDH8-202ENST00000577228 COX17Q14061 63 aa6.74□□□□□ -1.33
CDH8-202ENST00000577228 FP248Q71RG6 208 aaPredicted RBP6.74□□□□□ -1.33
CDH8-202ENST00000577228 HIST3H2BBQ8N257 126 aa6.74□□□□□ -1.33
CDH8-202ENST00000577228 Q8NDZ9 215 aa6.74□□□□□ -1.33
CDH8-202ENST00000577228 S100A6P06703 90 aa6.73□□□□□ -1.33
CDH8-202ENST00000577228 ZNF22P17026 224 aaPredicted RBP6.73□□□□□ -1.33
CDH8-202ENST00000577228 C4orf48Q5BLP8 95 aa6.73□□□□□ -1.33
CDH8-202ENST00000577228 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
CDH8-202ENST00000577228 SNRPEP62304 92 aaKnown RBP6.72□□□□□ -1.33
CDH8-202ENST00000577228 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
CDH8-202ENST00000577228 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
CDH8-202ENST00000577228 PMCHL2Q9BQD1 86 aa6.72□□□□□ -1.33
CDH8-202ENST00000577228 MAP1LC3CQ9BXW4 147 aa6.72□□□□□ -1.33
CDH8-202ENST00000577228 C5orf52A6NGY3 159 aa6.71□□□□□ -1.34
CDH8-202ENST00000577228 SYS1-DBNDD2H3BUS1 97 aa6.71□□□□□ -1.34
CDH8-202ENST00000577228 C3orf79P0CE67 100 aa6.71□□□□□ -1.34
CDH8-202ENST00000577228 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
CDH8-202ENST00000577228 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.34
CDH8-202ENST00000577228 SFTA2Q6UW10 78 aa6.7□□□□□ -1.34
CDH8-202ENST00000577228 S100A2P29034 98 aa6.69□□□□□ -1.34
CDH8-202ENST00000577228 KRTDAPP60985 99 aa6.69□□□□□ -1.34
CDH8-202ENST00000577228 KRTAP13-3Q3SY46 172 aa6.69□□□□□ -1.34
CDH8-202ENST00000577228 TMEM170BQ5T4T1 132 aa6.69□□□□□ -1.34
CDH8-202ENST00000577228 Q8NBF4 154 aa6.69□□□□□ -1.34
CDH8-202ENST00000577228 TMA7Q9Y2S6 64 aaKnown RBP6.69□□□□□ -1.34
CDH8-202ENST00000577228 LINC01547P58512 204 aaPredicted RBP6.68□□□□□ -1.34
CDH8-202ENST00000577228 LINC00158P58513 81 aa6.68□□□□□ -1.34
CDH8-202ENST00000577228 ASB16-AS1Q495Z4 193 aa6.68□□□□□ -1.34
CDH8-202ENST00000577228 LINC01545Q5VT33 79 aa6.68□□□□□ -1.34
CDH8-202ENST00000577228 PET117Q6UWS5 81 aa6.68□□□□□ -1.34
CDH8-202ENST00000577228 DAND5Q8N907 189 aa6.68□□□□□ -1.34
CDH8-202ENST00000577228 TMEM223A0PJW6 202 aa6.67□□□□□ -1.34
CDH8-202ENST00000577228 DPM2O94777 84 aa6.67□□□□□ -1.34
CDH8-202ENST00000577228 IGKCP01834 107 aa6.67□□□□□ -1.34
CDH8-202ENST00000577228 A0A0U1RRA0 63 aa6.66□□□□□ -1.34
CDH8-202ENST00000577228 PRYO14603 147 aa6.66□□□□□ -1.34
CDH8-202ENST00000577228 PLNP26678 52 aa6.66□□□□□ -1.34
CDH8-202ENST00000577228 SPINK1P00995 79 aa6.65□□□□□ -1.34
CDH8-202ENST00000577228 SEC61BP60468 96 aaKnown RBP6.65□□□□□ -1.34
CDH8-202ENST00000577228 SMCR5Q8TEV8 140 aa6.64□□□□□ -1.35
CDH8-202ENST00000577228 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
CDH8-202ENST00000577228 ETDCA0A1B0GVM5 59 aa6.63□□□□□ -1.35
CDH8-202ENST00000577228 NCR3O14931 201 aa6.63□□□□□ -1.35
CDH8-202ENST00000577228 SPRR1AP35321 89 aa6.63□□□□□ -1.35
CDH8-202ENST00000577228 BOD1L2Q8IYS8 172 aa6.63□□□□□ -1.35
CDH8-202ENST00000577228 NDUFA12Q9UI09 145 aa6.63□□□□□ -1.35
CDH8-202ENST00000577228 C20orf202A1L168 122 aa6.62□□□□□ -1.35
CDH8-202ENST00000577228 TSPEAR-AS2P59090 65 aa6.62□□□□□ -1.35
CDH8-202ENST00000577228 LINC00483Q53H64 154 aa6.62□□□□□ -1.35
CDH8-202ENST00000577228 LCE2DQ5TA82 110 aaPredicted RBP6.62□□□□□ -1.35
CDH8-202ENST00000577228 ATOH7Q8N100 152 aa6.62□□□□□ -1.35
CDH8-202ENST00000577228 KCNQ1DNQ9H478 68 aa6.62□□□□□ -1.35
CDH8-202ENST00000577228 SMIM13P0DJ93 91 aa6.61□□□□□ -1.35
CDH8-202ENST00000577228 MEIG1Q5JSS6 88 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms