RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	KIAA0087	Q14695	138 aa		10.06	□□□□□ -0.8
PRPF8-216	ENST00000577001	PPDPF	Q9H3Y8	114 aa		10.06	□□□□□ -0.8
PRPF8-216	ENST00000577001	FAM19A3	Q7Z5A8	133 aa		10.06	□□□□□ -0.8
PRPF8-216	ENST00000577001	DEFB105A	Q8NG35	78 aa		10.06	□□□□□ -0.8
PRPF8-216	ENST00000577001	FAM240A	A0A1B0GVK7	77 aa		10.05	□□□□□ -0.8
PRPF8-216	ENST00000577001	IGHV4-30-4	P0DP06	118 aa		10.05	□□□□□ -0.8
PRPF8-216	ENST00000577001		Q6ZQY7	126 aa		10.05	□□□□□ -0.8
PRPF8-216	ENST00000577001	CD164L2	Q6UWJ8	174 aa		10.05	□□□□□ -0.8
PRPF8-216	ENST00000577001		Q8N814	137 aa		10.05	□□□□□ -0.8
PRPF8-216	ENST00000577001	TRBV7-7	A0A0K0K1E9	115 aa		10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001		H0YGX0	51 aa		10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001	CMC4	P56277	68 aa	Predicted RBP	10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001		Q6Q795	121 aa		10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001		Q8IZM0	81 aa		10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001	KIR2DL5B	Q8NHK3	375 aa		10.04	□□□□□ -0.8
PRPF8-216	ENST00000577001	C16orf95	Q9H693	158 aa		10.03	□□□□□ -0.8
PRPF8-216	ENST00000577001	TRBV10-3	A0A0K0K1G6	114 aa		10.03	□□□□□ -0.8
PRPF8-216	ENST00000577001	MRAP	Q8TCY5	172 aa		10.02	□□□□□ -0.81
PRPF8-216	ENST00000577001	ACYP1	P07311	99 aa		10.01	□□□□□ -0.81
PRPF8-216	ENST00000577001	LINC01561	Q8N1V8	128 aa		10.01	□□□□□ -0.81
PRPF8-216	ENST00000577001		Q6ZTC4	211 aa		10.01	□□□□□ -0.81
PRPF8-216	ENST00000577001	TMEM126A	Q9H061	195 aa		10.01	□□□□□ -0.81
PRPF8-216	ENST00000577001		Q8N9L7	120 aa		10	□□□□□ -0.81
PRPF8-216	ENST00000577001	C3orf22	Q8N5N4	141 aa		10	□□□□□ -0.81
PRPF8-216	ENST00000577001	DSCR8	Q96T75	97 aa		10	□□□□□ -0.81
PRPF8-216	ENST00000577001	IGKV2D-24	A0A075B6R9	120 aa		9.99	□□□□□ -0.81
PRPF8-216	ENST00000577001	SPART-AS1	P0CW21	52 aa		9.99	□□□□□ -0.81
PRPF8-216	ENST00000577001	USP17L23	D6RBM5	183 aa		9.99	□□□□□ -0.81
PRPF8-216	ENST00000577001	SRRM2	Q9UQ35	2752 aa	Known RBP	9.98	□□□□□ -0.81
PRPF8-216	ENST00000577001	C9orf66	Q5T8R8	295 aa		9.98	□□□□□ -0.81
PRPF8-216	ENST00000577001	CAMK2N2	Q96S95	79 aa		9.98	□□□□□ -0.81
PRPF8-216	ENST00000577001		A0A1B0GUV1	79 aa		9.98	□□□□□ -0.81
PRPF8-216	ENST00000577001	ZNF561-AS1	K7EIQ3	104 aa		9.98	□□□□□ -0.81
PRPF8-216	ENST00000577001		Q8NAQ8	132 aa		9.97	□□□□□ -0.81
PRPF8-216	ENST00000577001	C6orf48	Q9UBA6	75 aa		9.97	□□□□□ -0.81
PRPF8-216	ENST00000577001	ANK2	Q01484	3957 aa		9.97	□□□□□ -0.81
PRPF8-216	ENST00000577001	STAB2	Q8WWQ8	2551 aa		9.96	□□□□□ -0.81
PRPF8-216	ENST00000577001	LINC01600	Q96MT4	127 aa		9.96	□□□□□ -0.82
PRPF8-216	ENST00000577001	GHRH	P01286	108 aa		9.95	□□□□□ -0.82
PRPF8-216	ENST00000577001	APOC4	P55056	127 aa		9.95	□□□□□ -0.82
PRPF8-216	ENST00000577001	RPL37AP8	A6NKH3	93 aa		9.95	□□□□□ -0.82
PRPF8-216	ENST00000577001	KPRP	Q5T749	579 aa	Predicted RBP	9.95	□□□□□ -0.82
PRPF8-216	ENST00000577001	LYPD5	Q6UWN5	251 aa		9.94	□□□□□ -0.82
PRPF8-216	ENST00000577001	C20orf197	Q8N268	126 aa		9.94	□□□□□ -0.82
PRPF8-216	ENST00000577001	SNURF	Q9Y675	71 aa		9.94	□□□□□ -0.82
PRPF8-216	ENST00000577001	LYRM9	A8MSI8	78 aa		9.94	□□□□□ -0.82
PRPF8-216	ENST00000577001	CCK	P06307	115 aa		9.94	□□□□□ -0.82
PRPF8-216	ENST00000577001		Q6ZRU5	148 aa		9.94	□□□□□ -0.82
PRPF8-216	ENST00000577001	RBM3	P98179	157 aa	Known RBP	9.93	□□□□□ -0.82
PRPF8-216	ENST00000577001	COX7C	P15954	63 aa		9.93	□□□□□ -0.82
PRPF8-216	ENST00000577001	UQCRQ	O14949	82 aa		9.92	□□□□□ -0.82
PRPF8-216	ENST00000577001	UPK3B	Q9BT76	320 aa		9.92	□□□□□ -0.82
PRPF8-216	ENST00000577001		A0A0G2JQZ4	141 aa		9.92	□□□□□ -0.82
PRPF8-216	ENST00000577001		A0A1W2PNN7	141 aa		9.92	□□□□□ -0.82
PRPF8-216	ENST00000577001	C3orf84	H3BNL1	204 aa		9.92	□□□□□ -0.82
PRPF8-216	ENST00000577001	LINC00575	Q6W349	94 aa		9.92	□□□□□ -0.82
PRPF8-216	ENST00000577001	TMEM256-PLSCR3	K7ERE1	68 aa		9.91	□□□□□ -0.82
PRPF8-216	ENST00000577001	LINC00612	Q8N6U2	182 aa		9.91	□□□□□ -0.82
PRPF8-216	ENST00000577001	C2orf48	Q96LS8	159 aa		9.91	□□□□□ -0.82
PRPF8-216	ENST00000577001		A0A0J9YWU9	116 aa		9.9	□□□□□ -0.82
PRPF8-216	ENST00000577001	UBL5	Q9BZL1	73 aa		9.9	□□□□□ -0.82
PRPF8-216	ENST00000577001	TRAV10	A0A0B4J240	114 aa		9.89	□□□□□ -0.83
PRPF8-216	ENST00000577001	LELP1	Q5T871	98 aa		9.89	□□□□□ -0.83
PRPF8-216	ENST00000577001	COL7A1	Q02388	2944 aa		9.89	□□□□□ -0.83
PRPF8-216	ENST00000577001	KRTAP10-11	P60412	298 aa		9.89	□□□□□ -0.83
PRPF8-216	ENST00000577001	ESRG	Q1W209	222 aa		9.89	□□□□□ -0.83
PRPF8-216	ENST00000577001	CASC10	Q5T4H9	136 aa		9.88	□□□□□ -0.83
PRPF8-216	ENST00000577001	SMIM9	A6NGZ8	99 aa		9.88	□□□□□ -0.83
PRPF8-216	ENST00000577001	ATOX1	O00244	68 aa		9.87	□□□□□ -0.83
PRPF8-216	ENST00000577001	IMUP	Q9GZP8	106 aa		9.87	□□□□□ -0.83
PRPF8-216	ENST00000577001	FAM168B	A1KXE4	195 aa		9.87	□□□□□ -0.83
PRPF8-216	ENST00000577001	ZNF73	O43830	326 aa	Predicted RBP	9.86	□□□□□ -0.83
PRPF8-216	ENST00000577001		Q6JHZ5	121 aa		9.86	□□□□□ -0.83
PRPF8-216	ENST00000577001	DIRC1	Q969H9	104 aa		9.86	□□□□□ -0.83
PRPF8-216	ENST00000577001	MIF	P14174	115 aa		9.84	□□□□□ -0.83
PRPF8-216	ENST00000577001	JMJD7-PLA2G4B	H0Y9G9	81 aa		9.84	□□□□□ -0.83
PRPF8-216	ENST00000577001		Q6ZRP5	223 aa		9.83	□□□□□ -0.84
PRPF8-216	ENST00000577001	COX7B	P24311	80 aa		9.83	□□□□□ -0.84
PRPF8-216	ENST00000577001	OBSCN-AS1	Q96MR7	158 aa		9.83	□□□□□ -0.84
PRPF8-216	ENST00000577001	C1orf43	Q9BWL3	253 aa		9.83	□□□□□ -0.84
PRPF8-216	ENST00000577001		Q6ZVQ6	151 aa		9.83	□□□□□ -0.84
PRPF8-216	ENST00000577001	SERP2	Q8N6R1	65 aa		9.82	□□□□□ -0.84
PRPF8-216	ENST00000577001		Q6ZQT0	140 aa		9.81	□□□□□ -0.84
PRPF8-216	ENST00000577001	DEFB131B	A0A096LNP1	70 aa		9.81	□□□□□ -0.84
PRPF8-216	ENST00000577001	LINC01547	P58512	204 aa	Predicted RBP	9.81	□□□□□ -0.84
PRPF8-216	ENST00000577001	BPY2	O14599	106 aa		9.81	□□□□□ -0.84
PRPF8-216	ENST00000577001	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	9.81	□□□□□ -0.84
PRPF8-216	ENST00000577001	RMI2	Q96E14	147 aa		9.81	□□□□□ -0.84
PRPF8-216	ENST00000577001	SERTAD4-AS1	Q5TG53	156 aa		9.8	□□□□□ -0.84
PRPF8-216	ENST00000577001	NDUFC2	O95298	119 aa		9.8	□□□□□ -0.84
PRPF8-216	ENST00000577001	COX17	Q14061	63 aa		9.8	□□□□□ -0.84
PRPF8-216	ENST00000577001	DEFB116	Q30KQ4	102 aa		9.79	□□□□□ -0.84
PRPF8-216	ENST00000577001	OXT	P01178	125 aa		9.79	□□□□□ -0.84
PRPF8-216	ENST00000577001	C15orf56	Q8N910	161 aa		9.78	□□□□□ -0.84
PRPF8-216	ENST00000577001	IGKV2-24	A0A0C4DH68	120 aa		9.78	□□□□□ -0.84
PRPF8-216	ENST00000577001	IGLV6-57	P01721	117 aa		9.78	□□□□□ -0.84
PRPF8-216	ENST00000577001	ST20-AS1	Q8NBB2	130 aa		9.78	□□□□□ -0.84
PRPF8-216	ENST00000577001	MUC7	Q8TAX7	377 aa		9.78	□□□□□ -0.84
PRPF8-216	ENST00000577001	LYST	Q99698	3801 aa		9.77	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms