RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 J3QQQ9 107 aa6.92□□□□□ -1.3
CHD3-216ENST00000573936 LINC00587B1AMM8 73 aa6.91□□□□□ -1.3
CHD3-216ENST00000573936 SMIM6P0DI80 62 aa6.91□□□□□ -1.3
CHD3-216ENST00000573936 HERV-K104P63124 156 aa6.91□□□□□ -1.3
CHD3-216ENST00000573936 C9orf129Q5T035 196 aaKnown RBP6.91□□□□□ -1.3
CHD3-216ENST00000573936 ZNF625Q96I27 306 aaPredicted RBP6.91□□□□□ -1.3
CHD3-216ENST00000573936 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
CHD3-216ENST00000573936 ERG28Q9UKR5 140 aa6.91□□□□□ -1.3
CHD3-216ENST00000573936 PAM16Q9Y3D7 125 aa6.91□□□□□ -1.3
CHD3-216ENST00000573936 MYMXA0A1B0GTQ4 84 aa6.9□□□□□ -1.3
CHD3-216ENST00000573936 PFN2P35080 140 aa6.9□□□□□ -1.3
CHD3-216ENST00000573936 NMUP48645 174 aa6.9□□□□□ -1.3
CHD3-216ENST00000573936 FAM19A5Q7Z5A7 132 aaPredicted RBP6.9□□□□□ -1.3
CHD3-216ENST00000573936 TTTY13Q9BZ97 58 aa6.9□□□□□ -1.3
CHD3-216ENST00000573936 LGALS3P17931 250 aaKnown RBP6.89□□□□□ -1.31
CHD3-216ENST00000573936 SPATA45Q537H7 98 aa6.89□□□□□ -1.31
CHD3-216ENST00000573936 XAGE1AQ9HD64 81 aa6.89□□□□□ -1.31
CHD3-216ENST00000573936 NDUFA12Q9UI09 145 aa6.89□□□□□ -1.31
CHD3-216ENST00000573936 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
CHD3-216ENST00000573936 FAM168BA1KXE4 195 aa6.88□□□□□ -1.31
CHD3-216ENST00000573936 LINC00158P58513 81 aa6.88□□□□□ -1.31
CHD3-216ENST00000573936 KRTAP10-4P60372 401 aaPredicted RBP6.88□□□□□ -1.31
CHD3-216ENST00000573936 LBHQ53QV2 105 aaPredicted RBP6.88□□□□□ -1.31
CHD3-216ENST00000573936 PHF5AQ7RTV0 110 aaKnown RBP6.88□□□□□ -1.31
CHD3-216ENST00000573936 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
CHD3-216ENST00000573936 M0QXV9 152 aa6.87□□□□□ -1.31
CHD3-216ENST00000573936 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
CHD3-216ENST00000573936 ZNF815PA8K554 130 aa6.86□□□□□ -1.31
CHD3-216ENST00000573936 UBE2BP63146 152 aa6.86□□□□□ -1.31
CHD3-216ENST00000573936 S100A12P80511 92 aa6.86□□□□□ -1.31
CHD3-216ENST00000573936 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
CHD3-216ENST00000573936 C22orf24Q9Y442 160 aa6.86□□□□□ -1.31
CHD3-216ENST00000573936 COX8AP10176 69 aa6.85□□□□□ -1.31
CHD3-216ENST00000573936 PRR3P79522 188 aaKnown RBP6.85□□□□□ -1.31
CHD3-216ENST00000573936 RPL24P83731 157 aaKnown RBP6.85□□□□□ -1.31
CHD3-216ENST00000573936 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
CHD3-216ENST00000573936 C12orf57Q99622 126 aa6.85□□□□□ -1.31
CHD3-216ENST00000573936 SND1-IT1Q9HBX3 110 aa6.85□□□□□ -1.31
CHD3-216ENST00000573936 IGLV5-37A0A075B6J1 123 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 A0A0J9YXY3 114 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 OXTP01178 125 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 SMIM13P0DJ93 91 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 BOD1L2Q8IYS8 172 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 LINC00518Q8N0U6 118 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 NKAPP1Q8N9T2 125 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 C14orf144Q96I85 54 aa6.84□□□□□ -1.31
CHD3-216ENST00000573936 A0A0U1RRA0 63 aa6.83□□□□□ -1.32
CHD3-216ENST00000573936 MRPL55Q7Z7F7 128 aaKnown RBP6.83□□□□□ -1.32
CHD3-216ENST00000573936 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
CHD3-216ENST00000573936 DLEU1O43261 78 aa6.82□□□□□ -1.32
CHD3-216ENST00000573936 C1orf137Q5JT78 98 aa6.82□□□□□ -1.32
CHD3-216ENST00000573936 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
CHD3-216ENST00000573936 SLC25A34Q6PIV7 304 aa6.81□□□□□ -1.32
CHD3-216ENST00000573936 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
CHD3-216ENST00000573936 LITAFQ99732 161 aa6.81□□□□□ -1.32
CHD3-216ENST00000573936 PRO1933Q9H354 126 aa6.81□□□□□ -1.32
CHD3-216ENST00000573936 TIMM17BO60830 172 aa6.8□□□□□ -1.32
CHD3-216ENST00000573936 VPREB1P12018 145 aa6.8□□□□□ -1.32
CHD3-216ENST00000573936 SPINK6Q6UWN8 80 aa6.8□□□□□ -1.32
CHD3-216ENST00000573936 SCGB1D4Q6XE38 83 aa6.8□□□□□ -1.32
CHD3-216ENST00000573936 HNRNPA3P51991 378 aaKnown RBP6.79□□□□□ -1.32
CHD3-216ENST00000573936 ADAMTSL4-AS1Q5T5F5 129 aa6.79□□□□□ -1.32
CHD3-216ENST00000573936 C2orf91Q6ZV80 131 aa6.79□□□□□ -1.32
CHD3-216ENST00000573936 LOC107984156A0A0G2JMH3 177 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 IGLV7-43P04211 117 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 SRSF9Q13242 221 aaKnown RBP eCLIP6.78□□□□□ -1.32
CHD3-216ENST00000573936 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 ARL17AQ8IVW1 177 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 DAND5Q8N907 189 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 MIEN1Q9BRT3 115 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
CHD3-216ENST00000573936 GAGE10A6NGK3 116 aa6.77□□□□□ -1.33
CHD3-216ENST00000573936 RPL37AP8A6NKH3 93 aa6.77□□□□□ -1.33
CHD3-216ENST00000573936 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
CHD3-216ENST00000573936 M0R378 163 aa6.77□□□□□ -1.33
CHD3-216ENST00000573936 SPANXDQ9BXN6 97 aa6.76□□□□□ -1.33
CHD3-216ENST00000573936 SPANXB1Q9NS25 103 aaPredicted RBP6.76□□□□□ -1.33
CHD3-216ENST00000573936 SPANXCQ9NY87 97 aa6.76□□□□□ -1.33
CHD3-216ENST00000573936 HIGD1BQ9P298 99 aa6.76□□□□□ -1.33
CHD3-216ENST00000573936 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
CHD3-216ENST00000573936 EIF4EBP3O60516 100 aaPredicted RBP6.75□□□□□ -1.33
CHD3-216ENST00000573936 REG3GQ6UW15 175 aa6.75□□□□□ -1.33
CHD3-216ENST00000573936 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
CHD3-216ENST00000573936 DIRC1Q969H9 104 aa6.75□□□□□ -1.33
CHD3-216ENST00000573936 IGKV2-28A0A075B6P5 120 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 TSTD3H0UI37 97 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 BCE1O60756 84 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 NDUFC2O95298 119 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 IGKV2D-28P01615 120 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 NPC2P61916 151 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 Q8NDZ9 215 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 LINC00308Q8TCZ7 52 aa6.74□□□□□ -1.33
CHD3-216ENST00000573936 TRBV10-2A0A0K0K1G8 114 aa6.73□□□□□ -1.33
CHD3-216ENST00000573936 ZNF861PO60384 105 aa6.73□□□□□ -1.33
CHD3-216ENST00000573936 Q6ZVH6 145 aa6.73□□□□□ -1.33
CHD3-216ENST00000573936 COPS9Q8WXC6 57 aa6.73□□□□□ -1.33
CHD3-216ENST00000573936 TNXBP22105 4242 aa6.73□□□□□ -1.33
CHD3-216ENST00000573936 NCR3O14931 201 aa6.72□□□□□ -1.33
CHD3-216ENST00000573936 IFITM1P13164 125 aa6.72□□□□□ -1.33
CHD3-216ENST00000573936 RPL28P46779 137 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms