RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 A0A1W2PNN7 141 aa13.5□□□□□ -0.25
UBFD1-210ENST00000571064 C9orf129Q5T035 196 aaKnown RBP13.5□□□□□ -0.25
UBFD1-210ENST00000571064 LGALS3P17931 250 aaKnown RBP13.49□□□□□ -0.25
UBFD1-210ENST00000571064 PFN2P35080 140 aa13.49□□□□□ -0.25
UBFD1-210ENST00000571064 MYMXA0A1B0GTQ4 84 aa13.48□□□□□ -0.25
UBFD1-210ENST00000571064 XAGE1AQ9HD64 81 aa13.48□□□□□ -0.25
UBFD1-210ENST00000571064 FAM168BA1KXE4 195 aa13.47□□□□□ -0.25
UBFD1-210ENST00000571064 SCGB1D1O95968 90 aa13.47□□□□□ -0.25
UBFD1-210ENST00000571064 KRTAP7-1Q8IUC3 87 aa13.47□□□□□ -0.25
UBFD1-210ENST00000571064 NMUP48645 174 aa13.46□□□□□ -0.25
UBFD1-210ENST00000571064 HERV-K104P63124 156 aa13.46□□□□□ -0.25
UBFD1-210ENST00000571064 COX17Q14061 63 aa13.45□□□□□ -0.26
UBFD1-210ENST00000571064 TTTY13Q9BZ97 58 aa13.45□□□□□ -0.26
UBFD1-210ENST00000571064 A0A0U1RRA0 63 aa13.44□□□□□ -0.26
UBFD1-210ENST00000571064 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
UBFD1-210ENST00000571064 LINC00158P58513 81 aa13.42□□□□□ -0.26
UBFD1-210ENST00000571064 MEIG1Q5JSS6 88 aa13.42□□□□□ -0.26
UBFD1-210ENST00000571064 SND1-IT1Q9HBX3 110 aa13.42□□□□□ -0.26
UBFD1-210ENST00000571064 A0A0J9YXY3 114 aa13.41□□□□□ -0.26
UBFD1-210ENST00000571064 JOSD1Q15040 202 aaPredicted RBP13.41□□□□□ -0.26
UBFD1-210ENST00000571064 FAM19A5Q7Z5A7 132 aaPredicted RBP13.39□□□□□ -0.27
UBFD1-210ENST00000571064 PCP2Q8IVA1 136 aa13.39□□□□□ -0.27
UBFD1-210ENST00000571064 ZNF815PA8K554 130 aa13.38□□□□□ -0.27
UBFD1-210ENST00000571064 TNXBP22105 4242 aa13.38□□□□□ -0.27
UBFD1-210ENST00000571064 PHF5AQ7RTV0 110 aaKnown RBP13.37□□□□□ -0.27
UBFD1-210ENST00000571064 MIR7-3HGQ8N6C7 128 aa13.37□□□□□ -0.27
UBFD1-210ENST00000571064 LINC00587B1AMM8 73 aa13.36□□□□□ -0.27
UBFD1-210ENST00000571064 Q8NDZ9 215 aa13.36□□□□□ -0.27
UBFD1-210ENST00000571064 HSBP1L1C9JCN9 74 aa13.35□□□□□ -0.27
UBFD1-210ENST00000571064 PYY3Q5JQD4 70 aa13.35□□□□□ -0.27
UBFD1-210ENST00000571064 ADAMTSL4-AS1Q5T5F5 129 aa13.35□□□□□ -0.27
UBFD1-210ENST00000571064 DAND5Q8N907 189 aa13.35□□□□□ -0.27
UBFD1-210ENST00000571064 LITAFQ99732 161 aa13.34□□□□□ -0.27
UBFD1-210ENST00000571064 M0QXV9 152 aa13.32□□□□□ -0.28
UBFD1-210ENST00000571064 KRTAP11-1Q8IUC1 163 aa13.32□□□□□ -0.28
UBFD1-210ENST00000571064 C22orf24Q9Y442 160 aa13.32□□□□□ -0.28
UBFD1-210ENST00000571064 VPREB1P12018 145 aa13.31□□□□□ -0.28
UBFD1-210ENST00000571064 IGLV5-37A0A075B6J1 123 aa13.3□□□□□ -0.28
UBFD1-210ENST00000571064 TIMM17BO60830 172 aa13.3□□□□□ -0.28
UBFD1-210ENST00000571064 EIF4EBP3O60516 100 aaPredicted RBP13.29□□□□□ -0.28
UBFD1-210ENST00000571064 LOC107984156A0A0G2JMH3 177 aa13.28□□□□□ -0.28
UBFD1-210ENST00000571064 SOSTDC1Q6X4U4 206 aa13.28□□□□□ -0.28
UBFD1-210ENST00000571064 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
UBFD1-210ENST00000571064 C7orf33Q8WU49 177 aa13.28□□□□□ -0.28
UBFD1-210ENST00000571064 TP73-AS1Q9UF72 201 aa13.28□□□□□ -0.28
UBFD1-210ENST00000571064 PAM16Q9Y3D7 125 aa13.27□□□□□ -0.29
UBFD1-210ENST00000571064 SPATA45Q537H7 98 aa13.26□□□□□ -0.29
UBFD1-210ENST00000571064 BOD1L2Q8IYS8 172 aa13.26□□□□□ -0.29
UBFD1-210ENST00000571064 VAMP8Q9BV40 100 aa13.26□□□□□ -0.29
UBFD1-210ENST00000571064 NPC2P61916 151 aa13.25□□□□□ -0.29
UBFD1-210ENST00000571064 SCGB1D4Q6XE38 83 aa13.25□□□□□ -0.29
UBFD1-210ENST00000571064 MRPL55Q7Z7F7 128 aaKnown RBP13.25□□□□□ -0.29
UBFD1-210ENST00000571064 LOC105371267A0A1B0GV96 52 aa13.24□□□□□ -0.29
UBFD1-210ENST00000571064 PRR3P79522 188 aaKnown RBP13.24□□□□□ -0.29
UBFD1-210ENST00000571064 RPL24P83731 157 aaKnown RBP13.24□□□□□ -0.29
UBFD1-210ENST00000571064 LINC00167Q96N53 147 aa13.24□□□□□ -0.29
UBFD1-210ENST00000571064 COX8AP10176 69 aa13.23□□□□□ -0.29
UBFD1-210ENST00000571064 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
UBFD1-210ENST00000571064 GAGE10A6NGK3 116 aa13.22□□□□□ -0.29
UBFD1-210ENST00000571064 LBHQ53QV2 105 aaPredicted RBP13.22□□□□□ -0.29
UBFD1-210ENST00000571064 LINC00308Q8TCZ7 52 aa13.22□□□□□ -0.29
UBFD1-210ENST00000571064 PSORS1C2Q9UIG4 136 aa13.22□□□□□ -0.29
UBFD1-210ENST00000571064 C14orf144Q96I85 54 aa13.21□□□□□ -0.29
UBFD1-210ENST00000571064 SPANXDQ9BXN6 97 aa13.21□□□□□ -0.29
UBFD1-210ENST00000571064 SPANXCQ9NY87 97 aa13.21□□□□□ -0.29
UBFD1-210ENST00000571064 RPL37AP8A6NKH3 93 aa13.2□□□□□ -0.3
UBFD1-210ENST00000571064 SMIM6P0DI80 62 aa13.2□□□□□ -0.3
UBFD1-210ENST00000571064 UBE2BP63146 152 aa13.2□□□□□ -0.3
UBFD1-210ENST00000571064 TMEM238C9JI98 176 aa13.19□□□□□ -0.3
UBFD1-210ENST00000571064 NCR3O14931 201 aa13.18□□□□□ -0.3
UBFD1-210ENST00000571064 DLEU1O43261 78 aa13.18□□□□□ -0.3
UBFD1-210ENST00000571064 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
UBFD1-210ENST00000571064 LINC01600Q96MT4 127 aa13.17□□□□□ -0.3
UBFD1-210ENST00000571064 M0R378 163 aa13.16□□□□□ -0.3
UBFD1-210ENST00000571064 IGLV1-50A0A075B6I6 118 aa13.15□□□□□ -0.3
UBFD1-210ENST00000571064 NDUFC2O95298 119 aa13.15□□□□□ -0.3
UBFD1-210ENST00000571064 S100A12P80511 92 aa13.14□□□□□ -0.31
UBFD1-210ENST00000571064 C1orf137Q5JT78 98 aa13.14□□□□□ -0.31
UBFD1-210ENST00000571064 SPANXB1Q9NS25 103 aaPredicted RBP13.14□□□□□ -0.31
UBFD1-210ENST00000571064 IGKV2-28A0A075B6P5 120 aa13.13□□□□□ -0.31
UBFD1-210ENST00000571064 IGKV2D-28P01615 120 aa13.13□□□□□ -0.31
UBFD1-210ENST00000571064 Q6ZVH6 145 aa13.13□□□□□ -0.31
UBFD1-210ENST00000571064 MUSTN1Q8IVN3 82 aa13.13□□□□□ -0.31
UBFD1-210ENST00000571064 SLC25A34Q6PIV7 304 aa13.12□□□□□ -0.31
UBFD1-210ENST00000571064 TRBV10-2A0A0K0K1G8 114 aa13.11□□□□□ -0.31
UBFD1-210ENST00000571064 IFITM1P13164 125 aa13.11□□□□□ -0.31
UBFD1-210ENST00000571064 C2orf91Q6ZV80 131 aa13.11□□□□□ -0.31
UBFD1-210ENST00000571064 PPDPFQ9H3Y8 114 aa13.11□□□□□ -0.31
UBFD1-210ENST00000571064 TRBV10-3A0A0K0K1G6 114 aa13.09□□□□□ -0.31
UBFD1-210ENST00000571064 IGLV7-43P04211 117 aa13.08□□□□□ -0.32
UBFD1-210ENST00000571064 SRSF9Q13242 221 aaKnown RBP eCLIP13.08□□□□□ -0.32
UBFD1-210ENST00000571064 KRTAP10-8P60410 259 aa13.07□□□□□ -0.32
UBFD1-210ENST00000571064 HIGD1BQ9P298 99 aa13.07□□□□□ -0.32
UBFD1-210ENST00000571064 TMEM126AQ9H061 195 aa13.06□□□□□ -0.32
UBFD1-210ENST00000571064 BCE1O60756 84 aa13.05□□□□□ -0.32
UBFD1-210ENST00000571064 IGLV6-57P01721 117 aa13.05□□□□□ -0.32
UBFD1-210ENST00000571064 COPS9Q8WXC6 57 aa13.05□□□□□ -0.32
UBFD1-210ENST00000571064 DDTP30046 118 aa13.04□□□□□ -0.32
UBFD1-210ENST00000571064 REG3GQ6UW15 175 aa13.04□□□□□ -0.32
UBFD1-210ENST00000571064 KCNQ1DNQ9H478 68 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms