RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 LINC00310P59036 64 aa11.04□□□□□ -0.64
SCARF1-204ENST00000570902 CHTOPQ9Y3Y2 248 aaKnown RBP11.04□□□□□ -0.64
SCARF1-204ENST00000570902 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
SCARF1-204ENST00000570902 UBE2AP49459 152 aa11.03□□□□□ -0.64
SCARF1-204ENST00000570902 TMEM170BQ5T4T1 132 aa11.03□□□□□ -0.64
SCARF1-204ENST00000570902 TRAV12-1A0A0B4J245 112 aa11.02□□□□□ -0.65
SCARF1-204ENST00000570902 CTAG1AP78358 180 aa11.02□□□□□ -0.65
SCARF1-204ENST00000570902 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
SCARF1-204ENST00000570902 KRTAP13-1Q8IUC0 172 aa11.01□□□□□ -0.65
SCARF1-204ENST00000570902 IGKV2D-26A0A0A0MRZ7 120 aa11□□□□□ -0.65
SCARF1-204ENST00000570902 GAGE10A6NGK3 116 aa11□□□□□ -0.65
SCARF1-204ENST00000570902 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
SCARF1-204ENST00000570902 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
SCARF1-204ENST00000570902 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
SCARF1-204ENST00000570902 PFN2P35080 140 aa10.98□□□□□ -0.65
SCARF1-204ENST00000570902 H0Y8G0 127 aa10.97□□□□□ -0.65
SCARF1-204ENST00000570902 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
SCARF1-204ENST00000570902 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
SCARF1-204ENST00000570902 FABP4P15090 132 aa10.95□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BKO60814 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BJP06899 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BOP23527 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BBP33778 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BDP58876 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BCP62807 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST2H2BEQ16778 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BHQ93079 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BNQ99877 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HIST1H2BMQ99879 126 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 HSPB8Q9UJY1 196 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 ERG28Q9UKR5 140 aa10.94□□□□□ -0.66
SCARF1-204ENST00000570902 PPDPFQ9H3Y8 114 aa10.93□□□□□ -0.66
SCARF1-204ENST00000570902 IGKV2-28A0A075B6P5 120 aa10.92□□□□□ -0.66
SCARF1-204ENST00000570902 IGKV2D-28P01615 120 aa10.92□□□□□ -0.66
SCARF1-204ENST00000570902 SFTA2Q6UW10 78 aa10.9□□□□□ -0.66
SCARF1-204ENST00000570902 SND1-IT1Q9HBX3 110 aa10.9□□□□□ -0.66
SCARF1-204ENST00000570902 PRLHP81277 87 aa10.89□□□□□ -0.67
SCARF1-204ENST00000570902 COX17Q14061 63 aa10.89□□□□□ -0.67
SCARF1-204ENST00000570902 FAM19A1Q7Z5A9 133 aa10.89□□□□□ -0.67
SCARF1-204ENST00000570902 SPAG11AQ6PDA7 123 aa10.88□□□□□ -0.67
SCARF1-204ENST00000570902 PMCHL2Q9BQD1 86 aa10.88□□□□□ -0.67
SCARF1-204ENST00000570902 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
SCARF1-204ENST00000570902 LINC00158P58513 81 aa10.87□□□□□ -0.67
SCARF1-204ENST00000570902 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
SCARF1-204ENST00000570902 PLNP26678 52 aa10.86□□□□□ -0.67
SCARF1-204ENST00000570902 FP248Q71RG6 208 aaPredicted RBP10.86□□□□□ -0.67
SCARF1-204ENST00000570902 MAP1LC3CQ9BXW4 147 aa10.86□□□□□ -0.67
SCARF1-204ENST00000570902 DPM2O94777 84 aa10.85□□□□□ -0.67
SCARF1-204ENST00000570902 VPREB1P12018 145 aa10.84□□□□□ -0.67
SCARF1-204ENST00000570902 LINC01547P58512 204 aaPredicted RBP10.84□□□□□ -0.67
SCARF1-204ENST00000570902 C3orf22Q8N5N4 141 aa10.84□□□□□ -0.67
SCARF1-204ENST00000570902 LINC00337Q8N6G1 96 aa10.84□□□□□ -0.67
SCARF1-204ENST00000570902 PLEKHB2Q96CS7 222 aa10.84□□□□□ -0.67
SCARF1-204ENST00000570902 TMEM238C9JI98 176 aa10.83□□□□□ -0.68
SCARF1-204ENST00000570902 RPL24P83731 157 aaKnown RBP10.83□□□□□ -0.68
SCARF1-204ENST00000570902 ATP6V1G1O75348 118 aa10.82□□□□□ -0.68
SCARF1-204ENST00000570902 IGKCP01834 107 aa10.82□□□□□ -0.68
SCARF1-204ENST00000570902 SMIM13P0DJ93 91 aa10.82□□□□□ -0.68
SCARF1-204ENST00000570902 MEIG1Q5JSS6 88 aa10.82□□□□□ -0.68
SCARF1-204ENST00000570902 NDUFA12Q9UI09 145 aa10.82□□□□□ -0.68
SCARF1-204ENST00000570902 SYS1-DBNDD2H3BUS1 97 aa10.81□□□□□ -0.68
SCARF1-204ENST00000570902 M0R378 163 aa10.81□□□□□ -0.68
SCARF1-204ENST00000570902 TSPEAR-AS2P59090 65 aa10.81□□□□□ -0.68
SCARF1-204ENST00000570902 C4orf48Q5BLP8 95 aa10.81□□□□□ -0.68
SCARF1-204ENST00000570902 Q8NDZ9 215 aa10.81□□□□□ -0.68
SCARF1-204ENST00000570902 LEPROTO15243 131 aa10.8□□□□□ -0.68
SCARF1-204ENST00000570902 HERV-K104P63124 156 aa10.8□□□□□ -0.68
SCARF1-204ENST00000570902 ASB16-AS1Q495Z4 193 aa10.8□□□□□ -0.68
SCARF1-204ENST00000570902 COA6Q5JTJ3 125 aaKnown RBP10.8□□□□□ -0.68
SCARF1-204ENST00000570902 MYMXA0A1B0GTQ4 84 aa10.79□□□□□ -0.68
SCARF1-204ENST00000570902 S100A1P23297 94 aa10.79□□□□□ -0.68
SCARF1-204ENST00000570902 HERVK_113P61574 105 aa10.79□□□□□ -0.68
SCARF1-204ENST00000570902 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
SCARF1-204ENST00000570902 HIGD2AQ9BW72 106 aa10.78□□□□□ -0.68
SCARF1-204ENST00000570902 J3QQQ9 107 aa10.77□□□□□ -0.69
SCARF1-204ENST00000570902 KRTAP13-3Q3SY46 172 aa10.77□□□□□ -0.69
SCARF1-204ENST00000570902 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.69
SCARF1-204ENST00000570902 SPRR4Q96PI1 79 aa10.76□□□□□ -0.69
SCARF1-204ENST00000570902 ZNF706Q9Y5V0 76 aaPredicted RBP10.76□□□□□ -0.69
SCARF1-204ENST00000570902 LINC00587B1AMM8 73 aa10.75□□□□□ -0.69
SCARF1-204ENST00000570902 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
SCARF1-204ENST00000570902 SEC61BP60468 96 aaKnown RBP10.74□□□□□ -0.69
SCARF1-204ENST00000570902 LINC01545Q5VT33 79 aa10.74□□□□□ -0.69
SCARF1-204ENST00000570902 PET117Q6UWS5 81 aa10.74□□□□□ -0.69
SCARF1-204ENST00000570902 BOD1L2Q8IYS8 172 aa10.74□□□□□ -0.69
SCARF1-204ENST00000570902 C3orf79P0CE67 100 aa10.73□□□□□ -0.69
SCARF1-204ENST00000570902 NMUP48645 174 aa10.72□□□□□ -0.69
SCARF1-204ENST00000570902 E9PLD3 99 aa10.71□□□□□ -0.69
SCARF1-204ENST00000570902 NCR3O14931 201 aa10.71□□□□□ -0.69
SCARF1-204ENST00000570902 KRTDAPP60985 99 aa10.71□□□□□ -0.69
SCARF1-204ENST00000570902 DAND5Q8N907 189 aa10.71□□□□□ -0.69
SCARF1-204ENST00000570902 Q8NBF4 154 aa10.71□□□□□ -0.69
SCARF1-204ENST00000570902 SPINK1P00995 79 aa10.7□□□□□ -0.7
SCARF1-204ENST00000570902 FSIP2Q5CZC0 6907 aa10.69□□□□□ -0.7
SCARF1-204ENST00000570902 CRCT1Q9UGL9 99 aa10.69□□□□□ -0.7
SCARF1-204ENST00000570902 KRTAP4-1Q9BYQ7 146 aa10.68□□□□□ -0.7
SCARF1-204ENST00000570902 A0A0J9YXY3 114 aa10.65□□□□□ -0.7
SCARF1-204ENST00000570902 LOC107984156A0A0G2JMH3 177 aa10.64□□□□□ -0.71
SCARF1-204ENST00000570902 ARL17AQ8IVW1 177 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms