RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
RAB40B-203ENST00000570676 SCGB1D4Q6XE38 83 aa9.54□□□□□ -0.88
RAB40B-203ENST00000570676 BOD1L2Q8IYS8 172 aa9.54□□□□□ -0.88
RAB40B-203ENST00000570676 LINC00518Q8N0U6 118 aa9.54□□□□□ -0.88
RAB40B-203ENST00000570676 PFN2P35080 140 aa9.53□□□□□ -0.88
RAB40B-203ENST00000570676 SLC25A34Q6PIV7 304 aa9.53□□□□□ -0.88
RAB40B-203ENST00000570676 TP73-AS1Q9UF72 201 aa9.53□□□□□ -0.88
RAB40B-203ENST00000570676 A0A0U1RRA0 63 aa9.52□□□□□ -0.89
RAB40B-203ENST00000570676 LINC00587B1AMM8 73 aa9.52□□□□□ -0.89
RAB40B-203ENST00000570676 DLEU1O43261 78 aa9.52□□□□□ -0.89
RAB40B-203ENST00000570676 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
RAB40B-203ENST00000570676 LINC00158P58513 81 aa9.52□□□□□ -0.89
RAB40B-203ENST00000570676 LOC107984640A0A0U1RRK4 108 aa9.51□□□□□ -0.89
RAB40B-203ENST00000570676 COX17Q14061 63 aa9.51□□□□□ -0.89
RAB40B-203ENST00000570676 A0A096LNI7 61 aa9.5□□□□□ -0.89
RAB40B-203ENST00000570676 IGKV2-24A0A0C4DH68 120 aa9.5□□□□□ -0.89
RAB40B-203ENST00000570676 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
RAB40B-203ENST00000570676 TLX1NBP0CAT3 122 aa9.5□□□□□ -0.89
RAB40B-203ENST00000570676 RPL18AQ02543 176 aaKnown RBP9.5□□□□□ -0.89
RAB40B-203ENST00000570676 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
RAB40B-203ENST00000570676 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
RAB40B-203ENST00000570676 TIMM17BO60830 172 aa9.49□□□□□ -0.89
RAB40B-203ENST00000570676 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
RAB40B-203ENST00000570676 Q6ZRP5 223 aa9.48□□□□□ -0.89
RAB40B-203ENST00000570676 DPH3Q96FX2 82 aa9.48□□□□□ -0.89
RAB40B-203ENST00000570676 LITAFQ99732 161 aa9.48□□□□□ -0.89
RAB40B-203ENST00000570676 UQCR10Q9UDW1 63 aa9.48□□□□□ -0.89
RAB40B-203ENST00000570676 TMEM238C9JI98 176 aa9.47□□□□□ -0.89
RAB40B-203ENST00000570676 GAGE2EQ4V326 116 aa9.47□□□□□ -0.89
RAB40B-203ENST00000570676 ADAMTSL4-AS1Q5T5F5 129 aa9.47□□□□□ -0.89
RAB40B-203ENST00000570676 MIR7-3HGQ8N6C7 128 aa9.47□□□□□ -0.89
RAB40B-203ENST00000570676 DAND5Q8N907 189 aa9.47□□□□□ -0.89
RAB40B-203ENST00000570676 GAGE2DQ9UEU5 116 aa9.47□□□□□ -0.89
RAB40B-203ENST00000570676 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
RAB40B-203ENST00000570676 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
RAB40B-203ENST00000570676 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
RAB40B-203ENST00000570676 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
RAB40B-203ENST00000570676 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
RAB40B-203ENST00000570676 XAGE1AQ9HD64 81 aa9.45□□□□□ -0.9
RAB40B-203ENST00000570676 TSTD3H0UI37 97 aa9.44□□□□□ -0.9
RAB40B-203ENST00000570676 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
RAB40B-203ENST00000570676 C2orf91Q6ZV80 131 aa9.44□□□□□ -0.9
RAB40B-203ENST00000570676 SPANXDQ9BXN6 97 aa9.44□□□□□ -0.9
RAB40B-203ENST00000570676 SPANXCQ9NY87 97 aa9.44□□□□□ -0.9
RAB40B-203ENST00000570676 HIGD1BQ9P298 99 aa9.44□□□□□ -0.9
RAB40B-203ENST00000570676 HMCN2Q8NDA2 5059 aa9.44□□□□□ -0.9
RAB40B-203ENST00000570676 NPC2P61916 151 aa9.43□□□□□ -0.9
RAB40B-203ENST00000570676 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
RAB40B-203ENST00000570676 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
RAB40B-203ENST00000570676 SPANXB1Q9NS25 103 aaPredicted RBP9.43□□□□□ -0.9
RAB40B-203ENST00000570676 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
RAB40B-203ENST00000570676 LINC00474Q9P2X8 69 aa9.42□□□□□ -0.9
RAB40B-203ENST00000570676 Q6ZVH6 145 aa9.41□□□□□ -0.9
RAB40B-203ENST00000570676 HIST1H4GQ99525 98 aa9.41□□□□□ -0.9
RAB40B-203ENST00000570676 SOSTDC1Q6X4U4 206 aa9.4□□□□□ -0.9
RAB40B-203ENST00000570676 LINC00308Q8TCZ7 52 aa9.4□□□□□ -0.9
RAB40B-203ENST00000570676 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
RAB40B-203ENST00000570676 IFITM1P13164 125 aa9.39□□□□□ -0.91
RAB40B-203ENST00000570676 LOC107984156A0A0G2JMH3 177 aa9.38□□□□□ -0.91
RAB40B-203ENST00000570676 MUSTN1Q8IVN3 82 aa9.38□□□□□ -0.91
RAB40B-203ENST00000570676 ARL17AQ8IVW1 177 aa9.38□□□□□ -0.91
RAB40B-203ENST00000570676 COPS9Q8WXC6 57 aa9.38□□□□□ -0.91
RAB40B-203ENST00000570676 FAM168BA1KXE4 195 aa9.37□□□□□ -0.91
RAB40B-203ENST00000570676 TAL2Q16559 108 aa9.37□□□□□ -0.91
RAB40B-203ENST00000570676 A0A1W2PNN7 141 aa9.36□□□□□ -0.91
RAB40B-203ENST00000570676 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
RAB40B-203ENST00000570676 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
RAB40B-203ENST00000570676 HSD52Q0P140 79 aa9.35□□□□□ -0.91
RAB40B-203ENST00000570676 FAM19A5Q7Z5A7 132 aaPredicted RBP9.35□□□□□ -0.91
RAB40B-203ENST00000570676 Q8NDZ9 215 aa9.35□□□□□ -0.91
RAB40B-203ENST00000570676 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
RAB40B-203ENST00000570676 VPREB1P12018 145 aa9.34□□□□□ -0.91
RAB40B-203ENST00000570676 DDTP30046 118 aa9.33□□□□□ -0.92
RAB40B-203ENST00000570676 CTAG1AP78358 180 aa9.33□□□□□ -0.92
RAB40B-203ENST00000570676 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
RAB40B-203ENST00000570676 CEND1Q8N111 149 aa9.33□□□□□ -0.92
RAB40B-203ENST00000570676 TNXBP22105 4242 aa9.32□□□□□ -0.92
RAB40B-203ENST00000570676 NDUFC2O95298 119 aa9.32□□□□□ -0.92
RAB40B-203ENST00000570676 NKAPP1Q8N9T2 125 aa9.32□□□□□ -0.92
RAB40B-203ENST00000570676 LINC01600Q96MT4 127 aa9.32□□□□□ -0.92
RAB40B-203ENST00000570676 IGLV5-37A0A075B6J1 123 aa9.31□□□□□ -0.92
RAB40B-203ENST00000570676 A4D1N5 150 aa9.31□□□□□ -0.92
RAB40B-203ENST00000570676 NCR3O14931 201 aa9.31□□□□□ -0.92
RAB40B-203ENST00000570676 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
RAB40B-203ENST00000570676 M0QXV9 152 aa9.3□□□□□ -0.92
RAB40B-203ENST00000570676 C22orf24Q9Y442 160 aa9.3□□□□□ -0.92
RAB40B-203ENST00000570676 FXYD2P54710 66 aa9.29□□□□□ -0.92
RAB40B-203ENST00000570676 IGKV2-28A0A075B6P5 120 aa9.28□□□□□ -0.92
RAB40B-203ENST00000570676 PCP4L1A6NKN8 68 aa9.28□□□□□ -0.92
RAB40B-203ENST00000570676 M0R378 163 aa9.28□□□□□ -0.92
RAB40B-203ENST00000570676 IGKV2D-28P01615 120 aa9.28□□□□□ -0.92
RAB40B-203ENST00000570676 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
RAB40B-203ENST00000570676 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
RAB40B-203ENST00000570676 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.93
RAB40B-203ENST00000570676 TMEM238LA0A1B0GVL6 79 aa9.27□□□□□ -0.93
RAB40B-203ENST00000570676 GAGE10A6NGK3 116 aa9.27□□□□□ -0.93
RAB40B-203ENST00000570676 A6NJY4 79 aa9.27□□□□□ -0.93
RAB40B-203ENST00000570676 HINT1P49773 126 aaPredicted RBP9.27□□□□□ -0.93
RAB40B-203ENST00000570676 LBHQ53QV2 105 aaPredicted RBP9.27□□□□□ -0.93
RAB40B-203ENST00000570676 PSORS1C2Q9UIG4 136 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms