RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 A0A0U1RRA0 63 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 NDUFC2-KCTD14E9PQ53 114 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 PTTG1IPP53801 180 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
UBR1-210ENST00000569337 HERV-K104P63124 156 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 RPL18AQ02543 176 aaKnown RBP5.93□□□□□ -1.46
UBR1-210ENST00000569337 GAGE2BQ13066 116 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 ADAMTSL4-AS1Q5T5F5 129 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 SFTA2Q6UW10 78 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 C14orf144Q96I85 54 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 LITAFQ99732 161 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 PLAC8Q9NZF1 115 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 LINC00474Q9P2X8 69 aa5.93□□□□□ -1.46
UBR1-210ENST00000569337 SMIM6P0DI80 62 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 COX8AP10176 69 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 GAGE2EQ4V326 116 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 MEIG1Q5JSS6 88 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 C9orf129Q5T035 196 aaKnown RBP5.92□□□□□ -1.46
UBR1-210ENST00000569337 BOD1L2Q8IYS8 172 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 DAND5Q8N907 189 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 GAGE2DQ9UEU5 116 aa5.92□□□□□ -1.46
UBR1-210ENST00000569337 MYCBP2O75592 4640 aa5.91□□□□□ -1.46
UBR1-210ENST00000569337 EIF4EBP3O60516 100 aaPredicted RBP5.91□□□□□ -1.46
UBR1-210ENST00000569337 LINC00158P58513 81 aa5.91□□□□□ -1.46
UBR1-210ENST00000569337 COX17Q14061 63 aa5.91□□□□□ -1.46
UBR1-210ENST00000569337 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
UBR1-210ENST00000569337 C7orf33Q8WU49 177 aa5.91□□□□□ -1.46
UBR1-210ENST00000569337 XAGE1AQ9HD64 81 aa5.91□□□□□ -1.46
UBR1-210ENST00000569337 FAM168BA1KXE4 195 aa5.9□□□□□ -1.46
UBR1-210ENST00000569337 KRTAP29-1A8MX34 341 aaPredicted RBP5.9□□□□□ -1.46
UBR1-210ENST00000569337 MIR7-3HGQ8N6C7 128 aa5.9□□□□□ -1.46
UBR1-210ENST00000569337 SND1-IT1Q9HBX3 110 aa5.9□□□□□ -1.46
UBR1-210ENST00000569337 A0A1W2PNN7 141 aa5.89□□□□□ -1.47
UBR1-210ENST00000569337 DLEU1O43261 78 aa5.89□□□□□ -1.47
UBR1-210ENST00000569337 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
UBR1-210ENST00000569337 SCGB1D4Q6XE38 83 aa5.89□□□□□ -1.47
UBR1-210ENST00000569337 Q8NDZ9 215 aa5.89□□□□□ -1.47
UBR1-210ENST00000569337 TIMM17BO60830 172 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 S100A12P80511 92 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 SERTAD4-AS1Q5TG53 156 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 C2orf91Q6ZV80 131 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 LINC00518Q8N0U6 118 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 C12orf57Q99622 126 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 PRO1933Q9H354 126 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 HERC1Q15751 4861 aa5.88□□□□□ -1.47
UBR1-210ENST00000569337 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
UBR1-210ENST00000569337 LINC00587B1AMM8 73 aa5.87□□□□□ -1.47
UBR1-210ENST00000569337 OXTP01178 125 aa5.87□□□□□ -1.47
UBR1-210ENST00000569337 HNRNPA3P51991 378 aaKnown RBP5.87□□□□□ -1.47
UBR1-210ENST00000569337 NPC2P61916 151 aa5.87□□□□□ -1.47
UBR1-210ENST00000569337 SLC25A34Q6PIV7 304 aa5.87□□□□□ -1.47
UBR1-210ENST00000569337 LOC107984156A0A0G2JMH3 177 aa5.86□□□□□ -1.47
UBR1-210ENST00000569337 ARL17AQ8IVW1 177 aa5.86□□□□□ -1.47
UBR1-210ENST00000569337 SPANXDQ9BXN6 97 aa5.86□□□□□ -1.47
UBR1-210ENST00000569337 SPANXCQ9NY87 97 aa5.86□□□□□ -1.47
UBR1-210ENST00000569337 TMEM238C9JI98 176 aa5.85□□□□□ -1.47
UBR1-210ENST00000569337 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
UBR1-210ENST00000569337 FAM19A5Q7Z5A7 132 aaPredicted RBP5.85□□□□□ -1.47
UBR1-210ENST00000569337 LINC00308Q8TCZ7 52 aa5.85□□□□□ -1.47
UBR1-210ENST00000569337 SPANXB1Q9NS25 103 aaPredicted RBP5.85□□□□□ -1.47
UBR1-210ENST00000569337 HIGD1BQ9P298 99 aa5.85□□□□□ -1.47
UBR1-210ENST00000569337 DMBT1Q9UGM3 2413 aaPredicted RBP5.84□□□□□ -1.47
UBR1-210ENST00000569337 VPREB1P12018 145 aa5.84□□□□□ -1.47
UBR1-210ENST00000569337 UQCR10Q9UDW1 63 aa5.84□□□□□ -1.47
UBR1-210ENST00000569337 PLA2G2DQ9UNK4 145 aa5.84□□□□□ -1.47
UBR1-210ENST00000569337 PHF5AQ7RTV0 110 aaKnown RBP5.83□□□□□ -1.48
UBR1-210ENST00000569337 MUSTN1Q8IVN3 82 aa5.83□□□□□ -1.48
UBR1-210ENST00000569337 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
UBR1-210ENST00000569337 C22orf24Q9Y442 160 aa5.83□□□□□ -1.48
UBR1-210ENST00000569337 IGLV5-37A0A075B6J1 123 aa5.82□□□□□ -1.48
UBR1-210ENST00000569337 SRSF9Q13242 221 aaKnown RBP eCLIP5.82□□□□□ -1.48
UBR1-210ENST00000569337 KRTAP11-1Q8IUC1 163 aa5.82□□□□□ -1.48
UBR1-210ENST00000569337 IGKV2-28A0A075B6P5 120 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 M0QXV9 152 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 NCR3O14931 201 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 IGKV2D-28P01615 120 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 IFITM1P13164 125 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 Q6ZVH6 145 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 HIST1H4GQ99525 98 aa5.81□□□□□ -1.48
UBR1-210ENST00000569337 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
UBR1-210ENST00000569337 LINC00167Q96N53 147 aa5.8□□□□□ -1.48
UBR1-210ENST00000569337 PPDPFQ9H3Y8 114 aa5.8□□□□□ -1.48
UBR1-210ENST00000569337 FAT3Q8TDW7 4589 aa5.79□□□□□ -1.48
UBR1-210ENST00000569337 PKHD1L1Q86WI1 4243 aa5.79□□□□□ -1.48
UBR1-210ENST00000569337 A4D1N5 150 aa5.79□□□□□ -1.48
UBR1-210ENST00000569337 GAGE10A6NGK3 116 aa5.79□□□□□ -1.48
UBR1-210ENST00000569337 NDUFC2O95298 119 aa5.79□□□□□ -1.48
UBR1-210ENST00000569337 RPL24P83731 157 aaKnown RBP5.79□□□□□ -1.48
UBR1-210ENST00000569337 MRPL55Q7Z7F7 128 aaKnown RBP5.79□□□□□ -1.48
UBR1-210ENST00000569337 NKAPP1Q8N9T2 125 aa5.79□□□□□ -1.48
UBR1-210ENST00000569337 RPL37AP8A6NKH3 93 aa5.78□□□□□ -1.48
UBR1-210ENST00000569337 TAL2Q16559 108 aa5.78□□□□□ -1.48
UBR1-210ENST00000569337 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
UBR1-210ENST00000569337 CEND1Q8N111 149 aa5.78□□□□□ -1.48
UBR1-210ENST00000569337 LINC00337Q8N6G1 96 aa5.78□□□□□ -1.48
UBR1-210ENST00000569337 IGLV1-50A0A075B6I6 118 aa5.77□□□□□ -1.49
UBR1-210ENST00000569337 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
UBR1-210ENST00000569337 TRBV10-2A0A0K0K1G8 114 aa5.77□□□□□ -1.49
UBR1-210ENST00000569337 TSTD3H0UI37 97 aa5.77□□□□□ -1.49
UBR1-210ENST00000569337 M0R378 163 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms