RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SPINK8P0C7L1 97 aa5.71□□□□□ -1.5
CAPN3-219ENST00000569136 SFTA2Q6UW10 78 aa5.71□□□□□ -1.5
CAPN3-219ENST00000569136 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
CAPN3-219ENST00000569136 S100A2P29034 98 aa5.7□□□□□ -1.5
CAPN3-219ENST00000569136 PRR3P79522 188 aaKnown RBP5.7□□□□□ -1.5
CAPN3-219ENST00000569136 SPINK6Q6UWN8 80 aa5.7□□□□□ -1.5
CAPN3-219ENST00000569136 HSPB8Q9UJY1 196 aa5.7□□□□□ -1.5
CAPN3-219ENST00000569136 ZNF22P17026 224 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-219ENST00000569136 COX17Q14061 63 aa5.69□□□□□ -1.5
CAPN3-219ENST00000569136 TMEM170BQ5T4T1 132 aa5.69□□□□□ -1.5
CAPN3-219ENST00000569136 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
CAPN3-219ENST00000569136 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
CAPN3-219ENST00000569136 SERF1AO75920 110 aa5.68□□□□□ -1.5
CAPN3-219ENST00000569136 LEPROTL1O95214 131 aa5.68□□□□□ -1.5
CAPN3-219ENST00000569136 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
CAPN3-219ENST00000569136 C9orf129Q5T035 196 aaKnown RBP5.68□□□□□ -1.5
CAPN3-219ENST00000569136 PHF5AQ7RTV0 110 aaKnown RBP5.68□□□□□ -1.5
CAPN3-219ENST00000569136 FAM19A2Q8N3H0 131 aa5.68□□□□□ -1.5
CAPN3-219ENST00000569136 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 FAM168BA1KXE4 195 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 TSTD3H0UI37 97 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 HNRNPA3P51991 378 aaKnown RBP5.67□□□□□ -1.5
CAPN3-219ENST00000569136 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 REG3GQ6UW15 175 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
CAPN3-219ENST00000569136 TP73-AS1Q9UF72 201 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 PSORS1C2Q9UIG4 136 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 PAM16Q9Y3D7 125 aa5.67□□□□□ -1.5
CAPN3-219ENST00000569136 TMEM223A0PJW6 202 aa5.66□□□□□ -1.5
CAPN3-219ENST00000569136 M0QXV9 152 aa5.66□□□□□ -1.5
CAPN3-219ENST00000569136 UBE2BP63146 152 aa5.66□□□□□ -1.5
CAPN3-219ENST00000569136 C1orf137Q5JT78 98 aa5.66□□□□□ -1.5
CAPN3-219ENST00000569136 XAGE1AQ9HD64 81 aa5.66□□□□□ -1.5
CAPN3-219ENST00000569136 C22orf24Q9Y442 160 aa5.66□□□□□ -1.5
CAPN3-219ENST00000569136 GAGE10A6NGK3 116 aa5.65□□□□□ -1.5
CAPN3-219ENST00000569136 PLNP26678 52 aa5.65□□□□□ -1.5
CAPN3-219ENST00000569136 KRTAP7-1Q8IUC3 87 aa5.65□□□□□ -1.5
CAPN3-219ENST00000569136 CBY1Q9Y3M2 126 aa5.65□□□□□ -1.5
CAPN3-219ENST00000569136 HERC1Q15751 4861 aa5.65□□□□□ -1.51
CAPN3-219ENST00000569136 NUPR1O60356 82 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 FABP4P15090 132 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 DDTP30046 118 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 C14orf144Q96I85 54 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 MAP1LC3CQ9BXW4 147 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 ERG28Q9UKR5 140 aa5.64□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BKO60814 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BJP06899 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BOP23527 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BBP33778 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 PFN2P35080 140 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BDP58876 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BCP62807 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HERV-K104P63124 156 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST2H2BEQ16778 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-219ENST00000569136 MRPL55Q7Z7F7 128 aaKnown RBP5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BHQ93079 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 DIRC1Q969H9 104 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 ZNF625Q96I27 306 aaPredicted RBP5.63□□□□□ -1.51
CAPN3-219ENST00000569136 LINC01600Q96MT4 127 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BNQ99877 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 HIST1H2BMQ99879 126 aa5.63□□□□□ -1.51
CAPN3-219ENST00000569136 IGLV5-37A0A075B6J1 123 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 MYMXA0A1B0GTQ4 84 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 H0Y8G0 127 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 DPM2O94777 84 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 LINC00158P58513 81 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 NKAPP1Q8N9T2 125 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 PLEKHB2Q96CS7 222 aa5.62□□□□□ -1.51
CAPN3-219ENST00000569136 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
CAPN3-219ENST00000569136 A0A1B0GV90 55 aa5.61□□□□□ -1.51
CAPN3-219ENST00000569136 HERVK_113P61574 105 aa5.61□□□□□ -1.51
CAPN3-219ENST00000569136 PYY3Q5JQD4 70 aa5.61□□□□□ -1.51
CAPN3-219ENST00000569136 LINC00167Q96N53 147 aa5.61□□□□□ -1.51
CAPN3-219ENST00000569136 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
CAPN3-219ENST00000569136 LEPROTO15243 131 aa5.6□□□□□ -1.51
CAPN3-219ENST00000569136 IGKCP01834 107 aa5.6□□□□□ -1.51
CAPN3-219ENST00000569136 NMUP48645 174 aa5.6□□□□□ -1.51
CAPN3-219ENST00000569136 COA6Q5JTJ3 125 aaKnown RBP5.6□□□□□ -1.51
CAPN3-219ENST00000569136 NDUFA12Q9UI09 145 aa5.6□□□□□ -1.51
CAPN3-219ENST00000569136 ZNF861PO60384 105 aa5.59□□□□□ -1.51
CAPN3-219ENST00000569136 PET117Q6UWS5 81 aa5.59□□□□□ -1.51
CAPN3-219ENST00000569136 KRTAP11-1Q8IUC1 163 aa5.59□□□□□ -1.51
CAPN3-219ENST00000569136 HIST3H2BBQ8N257 126 aa5.59□□□□□ -1.51
CAPN3-219ENST00000569136 SYS1-DBNDD2H3BUS1 97 aa5.58□□□□□ -1.52
CAPN3-219ENST00000569136 MT1HL1P0DM35 61 aa5.58□□□□□ -1.52
CAPN3-219ENST00000569136 RPL28P46779 137 aaKnown RBP5.58□□□□□ -1.52
CAPN3-219ENST00000569136 KRTAP10-8P60410 259 aa5.58□□□□□ -1.52
CAPN3-219ENST00000569136 JOSD1Q15040 202 aaPredicted RBP5.58□□□□□ -1.52
CAPN3-219ENST00000569136 PKHD1L1Q86WI1 4243 aa5.58□□□□□ -1.52
CAPN3-219ENST00000569136 FAT3Q8TDW7 4589 aa5.58□□□□□ -1.52
CAPN3-219ENST00000569136 RPL37AP8A6NKH3 93 aa5.57□□□□□ -1.52
CAPN3-219ENST00000569136 H0Y9J4 135 aa5.57□□□□□ -1.52
CAPN3-219ENST00000569136 J3QQQ9 107 aa5.57□□□□□ -1.52
CAPN3-219ENST00000569136 BCE1O60756 84 aa5.57□□□□□ -1.52
CAPN3-219ENST00000569136 VPREB1P12018 145 aa5.57□□□□□ -1.52
CAPN3-219ENST00000569136 LGALS3P17931 250 aaKnown RBP5.57□□□□□ -1.52
CAPN3-219ENST00000569136 MEIG1Q5JSS6 88 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms