RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
COMMD4-223ENST00000568301 IGLV5-39A0A0G2JS06 123 aa8.69□□□□□ -1.02
COMMD4-223ENST00000568301 PFN2P35080 140 aa8.69□□□□□ -1.02
COMMD4-223ENST00000568301 PRLHP81277 87 aa8.69□□□□□ -1.02
COMMD4-223ENST00000568301 HBDP02042 147 aa8.68□□□□□ -1.02
COMMD4-223ENST00000568301 VPREB1P12018 145 aa8.68□□□□□ -1.02
COMMD4-223ENST00000568301 RPL24P83731 157 aaKnown RBP8.68□□□□□ -1.02
COMMD4-223ENST00000568301 COX17Q14061 63 aa8.68□□□□□ -1.02
COMMD4-223ENST00000568301 FAM19A1Q7Z5A9 133 aa8.68□□□□□ -1.02
COMMD4-223ENST00000568301 TMEM126AQ9H061 195 aa8.68□□□□□ -1.02
COMMD4-223ENST00000568301 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
COMMD4-223ENST00000568301 A0A096LNJ9 63 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BKO60814 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BJP06899 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 IGLC3P0DOY3 106 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BOP23527 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BBP33778 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BDP58876 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BCP62807 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST2H2BEQ16778 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BHQ93079 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BNQ99877 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 HIST1H2BMQ99879 126 aa8.67□□□□□ -1.02
COMMD4-223ENST00000568301 TMEM238C9JI98 176 aa8.66□□□□□ -1.02
COMMD4-223ENST00000568301 ERG28Q9UKR5 140 aa8.66□□□□□ -1.02
COMMD4-223ENST00000568301 M0R378 163 aa8.65□□□□□ -1.02
COMMD4-223ENST00000568301 HSBP1O75506 76 aa8.65□□□□□ -1.02
COMMD4-223ENST00000568301 COA6Q5JTJ3 125 aaKnown RBP8.64□□□□□ -1.03
COMMD4-223ENST00000568301 SPAG11AQ6PDA7 123 aa8.64□□□□□ -1.03
COMMD4-223ENST00000568301 SERF1AO75920 110 aa8.63□□□□□ -1.03
COMMD4-223ENST00000568301 ZNF22P17026 224 aaPredicted RBP8.63□□□□□ -1.03
COMMD4-223ENST00000568301 LINC00310P59036 64 aa8.63□□□□□ -1.03
COMMD4-223ENST00000568301 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
COMMD4-223ENST00000568301 NDUFA6P56556 154 aa8.62□□□□□ -1.03
COMMD4-223ENST00000568301 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
COMMD4-223ENST00000568301 C3orf22Q8N5N4 141 aa8.61□□□□□ -1.03
COMMD4-223ENST00000568301 Q8NDZ9 215 aa8.61□□□□□ -1.03
COMMD4-223ENST00000568301 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
COMMD4-223ENST00000568301 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
COMMD4-223ENST00000568301 HIGD2AQ9BW72 106 aa8.6□□□□□ -1.03
COMMD4-223ENST00000568301 LEPROTL1O95214 131 aa8.59□□□□□ -1.03
COMMD4-223ENST00000568301 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
COMMD4-223ENST00000568301 IFI27L1Q96BM0 104 aa8.59□□□□□ -1.03
COMMD4-223ENST00000568301 TRAV12-1A0A0B4J245 112 aa8.58□□□□□ -1.04
COMMD4-223ENST00000568301 FP248Q71RG6 208 aaPredicted RBP8.58□□□□□ -1.04
COMMD4-223ENST00000568301 SPRR4Q96PI1 79 aa8.58□□□□□ -1.04
COMMD4-223ENST00000568301 HSPB8Q9UJY1 196 aa8.58□□□□□ -1.04
COMMD4-223ENST00000568301 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
COMMD4-223ENST00000568301 C4orf48Q5BLP8 95 aa8.57□□□□□ -1.04
COMMD4-223ENST00000568301 FSIP2Q5CZC0 6907 aa8.56□□□□□ -1.04
COMMD4-223ENST00000568301 LINC00158P58513 81 aa8.56□□□□□ -1.04
COMMD4-223ENST00000568301 TMEM170BQ5T4T1 132 aa8.56□□□□□ -1.04
COMMD4-223ENST00000568301 ZNF706Q9Y5V0 76 aaPredicted RBP8.56□□□□□ -1.04
COMMD4-223ENST00000568301 LCE2DQ5TA82 110 aaPredicted RBP8.53□□□□□ -1.04
COMMD4-223ENST00000568301 LINC00337Q8N6G1 96 aa8.53□□□□□ -1.04
COMMD4-223ENST00000568301 PRYO14603 147 aa8.52□□□□□ -1.05
COMMD4-223ENST00000568301 FABP4P15090 132 aa8.52□□□□□ -1.05
COMMD4-223ENST00000568301 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.05
COMMD4-223ENST00000568301 Q8NBF4 154 aa8.52□□□□□ -1.05
COMMD4-223ENST00000568301 MAP1LC3CQ9BXW4 147 aa8.52□□□□□ -1.05
COMMD4-223ENST00000568301 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
COMMD4-223ENST00000568301 SPINK1P00995 79 aa8.51□□□□□ -1.05
COMMD4-223ENST00000568301 S100A6P06703 90 aa8.51□□□□□ -1.05
COMMD4-223ENST00000568301 SPRR1AP35321 89 aa8.51□□□□□ -1.05
COMMD4-223ENST00000568301 KCNQ1DNQ9H478 68 aa8.51□□□□□ -1.05
COMMD4-223ENST00000568301 A0A0U1RRA0 63 aa8.5□□□□□ -1.05
COMMD4-223ENST00000568301 TMEM223A0PJW6 202 aa8.5□□□□□ -1.05
COMMD4-223ENST00000568301 ASB16-AS1Q495Z4 193 aa8.5□□□□□ -1.05
COMMD4-223ENST00000568301 DAND5Q8N907 189 aa8.5□□□□□ -1.05
COMMD4-223ENST00000568301 SMCR5Q8TEV8 140 aa8.5□□□□□ -1.05
COMMD4-223ENST00000568301 KRTAP4-16G5E9R7 235 aaPredicted RBP8.49□□□□□ -1.05
COMMD4-223ENST00000568301 BOD1L2Q8IYS8 172 aa8.49□□□□□ -1.05
COMMD4-223ENST00000568301 CRCT1Q9UGL9 99 aa8.49□□□□□ -1.05
COMMD4-223ENST00000568301 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
COMMD4-223ENST00000568301 LINC01547P58512 204 aaPredicted RBP8.48□□□□□ -1.05
COMMD4-223ENST00000568301 PET117Q6UWS5 81 aa8.48□□□□□ -1.05
COMMD4-223ENST00000568301 KRTAP4-1Q9BYQ7 146 aa8.48□□□□□ -1.05
COMMD4-223ENST00000568301 SYS1-DBNDD2H3BUS1 97 aa8.47□□□□□ -1.05
COMMD4-223ENST00000568301 PLNP26678 52 aa8.47□□□□□ -1.05
COMMD4-223ENST00000568301 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
COMMD4-223ENST00000568301 HIST3H2BBQ8N257 126 aa8.47□□□□□ -1.05
COMMD4-223ENST00000568301 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.06
COMMD4-223ENST00000568301 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
COMMD4-223ENST00000568301 LINC00587B1AMM8 73 aa8.46□□□□□ -1.06
COMMD4-223ENST00000568301 AKR1D1P51857 326 aa8.46□□□□□ -1.06
COMMD4-223ENST00000568301 HERV-K104P63124 156 aa8.46□□□□□ -1.06
COMMD4-223ENST00000568301 MIR7-3HGQ8N6C7 128 aa8.46□□□□□ -1.06
COMMD4-223ENST00000568301 S100A2P29034 98 aa8.45□□□□□ -1.06
COMMD4-223ENST00000568301 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
COMMD4-223ENST00000568301 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
COMMD4-223ENST00000568301 LINC01545Q5VT33 79 aa8.45□□□□□ -1.06
COMMD4-223ENST00000568301 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
COMMD4-223ENST00000568301 NCR3O14931 201 aa8.44□□□□□ -1.06
COMMD4-223ENST00000568301 DPM2O94777 84 aa8.44□□□□□ -1.06
COMMD4-223ENST00000568301 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
COMMD4-223ENST00000568301 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
COMMD4-223ENST00000568301 SNRPEP62304 92 aaKnown RBP8.44□□□□□ -1.06
COMMD4-223ENST00000568301 S100A12P80511 92 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms