RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
CNOT1-213ENST00000568158 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
CNOT1-213ENST00000568158 KRTAP29-1A8MX34 341 aaPredicted RBP8.01□□□□□ -1.13
CNOT1-213ENST00000568158 SRSF9Q13242 221 aaKnown RBP eCLIP8.01□□□□□ -1.13
CNOT1-213ENST00000568158 C1orf137Q5JT78 98 aa8.01□□□□□ -1.13
CNOT1-213ENST00000568158 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 LEPROTO15243 131 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 LINC00158P58513 81 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 TSPEAR-AS2P59090 65 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 UBE2BP63146 152 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 COX17Q14061 63 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
CNOT1-213ENST00000568158 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
CNOT1-213ENST00000568158 C3orf79P0CE67 100 aa7.99□□□□□ -1.13
CNOT1-213ENST00000568158 NDUFA12Q9UI09 145 aa7.99□□□□□ -1.13
CNOT1-213ENST00000568158 PLA2G2DQ9UNK4 145 aa7.99□□□□□ -1.13
CNOT1-213ENST00000568158 OXTP01178 125 aa7.98□□□□□ -1.13
CNOT1-213ENST00000568158 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
CNOT1-213ENST00000568158 LBHQ53QV2 105 aaPredicted RBP7.98□□□□□ -1.13
CNOT1-213ENST00000568158 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
CNOT1-213ENST00000568158 PET117Q6UWS5 81 aa7.98□□□□□ -1.13
CNOT1-213ENST00000568158 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
CNOT1-213ENST00000568158 LINC00167Q96N53 147 aa7.98□□□□□ -1.13
CNOT1-213ENST00000568158 MYMXA0A1B0GTQ4 84 aa7.97□□□□□ -1.13
CNOT1-213ENST00000568158 GAGE10A6NGK3 116 aa7.97□□□□□ -1.13
CNOT1-213ENST00000568158 HERVK_113P61574 105 aa7.97□□□□□ -1.13
CNOT1-213ENST00000568158 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
CNOT1-213ENST00000568158 SPINK6Q6UWN8 80 aa7.97□□□□□ -1.13
CNOT1-213ENST00000568158 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
CNOT1-213ENST00000568158 RPL37AP8A6NKH3 93 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 J3QQQ9 107 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 IGLV7-43P04211 117 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 KRTDAPP60985 99 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 HERV-K104P63124 156 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 Q8NDZ9 215 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 TP73-AS1Q9UF72 201 aa7.96□□□□□ -1.14
CNOT1-213ENST00000568158 IGLV5-37A0A075B6J1 123 aa7.95□□□□□ -1.14
CNOT1-213ENST00000568158 VPREB1P12018 145 aa7.94□□□□□ -1.14
CNOT1-213ENST00000568158 LGALS3P17931 250 aaKnown RBP7.94□□□□□ -1.14
CNOT1-213ENST00000568158 NKAPP1Q8N9T2 125 aa7.94□□□□□ -1.14
CNOT1-213ENST00000568158 E9PLD3 99 aa7.93□□□□□ -1.14
CNOT1-213ENST00000568158 LCE1DQ5T752 114 aa7.93□□□□□ -1.14
CNOT1-213ENST00000568158 MIR7-3HGQ8N6C7 128 aa7.93□□□□□ -1.14
CNOT1-213ENST00000568158 LINC00587B1AMM8 73 aa7.92□□□□□ -1.14
CNOT1-213ENST00000568158 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
CNOT1-213ENST00000568158 HIST3H2BBQ8N257 126 aa7.92□□□□□ -1.14
CNOT1-213ENST00000568158 NMUP48645 174 aa7.91□□□□□ -1.14
CNOT1-213ENST00000568158 DAND5Q8N907 189 aa7.91□□□□□ -1.14
CNOT1-213ENST00000568158 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
CNOT1-213ENST00000568158 IGLV1-50A0A075B6I6 118 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 IGKV2D-26A0A0A0MRZ7 120 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 S100A6P06703 90 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 S100A2P29034 98 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 SNRPEP62304 92 aaKnown RBP7.89□□□□□ -1.15
CNOT1-213ENST00000568158 REG3GQ6UW15 175 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 BOD1L2Q8IYS8 172 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 LINC01600Q96MT4 127 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
CNOT1-213ENST00000568158 HERC1Q15751 4861 aa7.89□□□□□ -1.15
CNOT1-213ENST00000568158 A0A0J9YXY3 114 aa7.88□□□□□ -1.15
CNOT1-213ENST00000568158 DIRC1Q969H9 104 aa7.88□□□□□ -1.15
CNOT1-213ENST00000568158 TTTY13Q9BZ97 58 aa7.88□□□□□ -1.15
CNOT1-213ENST00000568158 C20orf202A1L168 122 aa7.87□□□□□ -1.15
CNOT1-213ENST00000568158 ZNF861PO60384 105 aa7.87□□□□□ -1.15
CNOT1-213ENST00000568158 BCE1O60756 84 aa7.87□□□□□ -1.15
CNOT1-213ENST00000568158 ADAMTSL4-AS1Q5T5F5 129 aa7.87□□□□□ -1.15
CNOT1-213ENST00000568158 H0Y9J4 135 aa7.86□□□□□ -1.15
CNOT1-213ENST00000568158 M0R378 163 aa7.86□□□□□ -1.15
CNOT1-213ENST00000568158 ANKRD39Q53RE8 183 aa7.86□□□□□ -1.15
CNOT1-213ENST00000568158 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
CNOT1-213ENST00000568158 TMEM238C9JI98 176 aa7.85□□□□□ -1.15
CNOT1-213ENST00000568158 NCR3O14931 201 aa7.85□□□□□ -1.15
CNOT1-213ENST00000568158 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-213ENST00000568158 KRTAP10-8P60410 259 aa7.85□□□□□ -1.15
CNOT1-213ENST00000568158 NPC2P61916 151 aa7.85□□□□□ -1.15
CNOT1-213ENST00000568158 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
CNOT1-213ENST00000568158 C5orf52A6NGY3 159 aa7.84□□□□□ -1.15
CNOT1-213ENST00000568158 ZNF815PA8K554 130 aa7.84□□□□□ -1.15
CNOT1-213ENST00000568158 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
CNOT1-213ENST00000568158 TMEM126AQ9H061 195 aa7.83□□□□□ -1.16
CNOT1-213ENST00000568158 TNXBP22105 4242 aa7.83□□□□□ -1.16
CNOT1-213ENST00000568158 RPL28P46779 137 aaKnown RBP7.82□□□□□ -1.16
CNOT1-213ENST00000568158 UBE2AP49459 152 aa7.82□□□□□ -1.16
CNOT1-213ENST00000568158 FAM19A1Q7Z5A9 133 aa7.82□□□□□ -1.16
CNOT1-213ENST00000568158 LITAFQ99732 161 aa7.82□□□□□ -1.16
CNOT1-213ENST00000568158 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
CNOT1-213ENST00000568158 KRTAP13-1Q8IUC0 172 aa7.81□□□□□ -1.16
CNOT1-213ENST00000568158 PRR26Q8N8Z3 221 aa7.81□□□□□ -1.16
CNOT1-213ENST00000568158 MIEN1Q9BRT3 115 aa7.81□□□□□ -1.16
CNOT1-213ENST00000568158 PRLHP81277 87 aa7.8□□□□□ -1.16
CNOT1-213ENST00000568158 PCP2Q8IVA1 136 aa7.8□□□□□ -1.16
CNOT1-213ENST00000568158 TRBV10-3A0A0K0K1G6 114 aa7.79□□□□□ -1.16
CNOT1-213ENST00000568158 TIMM17BO60830 172 aa7.79□□□□□ -1.16
CNOT1-213ENST00000568158 AKR1D1P51857 326 aa7.79□□□□□ -1.16
CNOT1-213ENST00000568158 LINC00308Q8TCZ7 52 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms