RNA–Protein interactions for RNA: ENST00000566515.5

CCNDBP1-208, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 5

Gene CCNDBP1, Length 1,634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-208ENST00000566515 C22orf24Q9Y442 160 aa13□□□□□ -0.33
CCNDBP1-208ENST00000566515 FLG2Q5D862 2391 aaPredicted RBP12.99□□□□□ -0.33
CCNDBP1-208ENST00000566515 KRTAP11-1Q8IUC1 163 aa12.99□□□□□ -0.33
CCNDBP1-208ENST00000566515 C5orf52A6NGY3 159 aa12.99□□□□□ -0.33
CCNDBP1-208ENST00000566515 ATOH7Q8N100 152 aa12.99□□□□□ -0.33
CCNDBP1-208ENST00000566515 PSORS1C2Q9UIG4 136 aa12.98□□□□□ -0.33
CCNDBP1-208ENST00000566515 NMUP48645 174 aa12.97□□□□□ -0.33
CCNDBP1-208ENST00000566515 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
CCNDBP1-208ENST00000566515 UBE2BP63146 152 aa12.96□□□□□ -0.33
CCNDBP1-208ENST00000566515 IGKV2D-26A0A0A0MRZ7 120 aa12.95□□□□□ -0.34
CCNDBP1-208ENST00000566515 LINC00587B1AMM8 73 aa12.94□□□□□ -0.34
CCNDBP1-208ENST00000566515 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
CCNDBP1-208ENST00000566515 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
CCNDBP1-208ENST00000566515 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
CCNDBP1-208ENST00000566515 TP73-AS1Q9UF72 201 aa12.93□□□□□ -0.34
CCNDBP1-208ENST00000566515 C1orf137Q5JT78 98 aa12.92□□□□□ -0.34
CCNDBP1-208ENST00000566515 NKAPP1Q8N9T2 125 aa12.92□□□□□ -0.34
CCNDBP1-208ENST00000566515 Q8NDZ9 215 aa12.92□□□□□ -0.34
CCNDBP1-208ENST00000566515 IGLV5-37A0A075B6J1 123 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 DAND5Q8N907 189 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 GAGE10A6NGK3 116 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 VPREB1P12018 145 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 ANKRD39Q53RE8 183 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 TTTY13Q9BZ97 58 aa12.91□□□□□ -0.34
CCNDBP1-208ENST00000566515 MYCBP2O75592 4640 aa12.9□□□□□ -0.34
CCNDBP1-208ENST00000566515 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
CCNDBP1-208ENST00000566515 AKR1D1P51857 326 aa12.9□□□□□ -0.34
CCNDBP1-208ENST00000566515 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
CCNDBP1-208ENST00000566515 RPL24P83731 157 aaKnown RBP12.89□□□□□ -0.35
CCNDBP1-208ENST00000566515 PKHD1L1Q86WI1 4243 aa12.88□□□□□ -0.35
CCNDBP1-208ENST00000566515 ZNF815PA8K554 130 aa12.88□□□□□ -0.35
CCNDBP1-208ENST00000566515 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
CCNDBP1-208ENST00000566515 ADAMTSL4-AS1Q5T5F5 129 aa12.85□□□□□ -0.35
CCNDBP1-208ENST00000566515 SCGB1D1O95968 90 aa12.84□□□□□ -0.35
CCNDBP1-208ENST00000566515 SRSF9Q13242 221 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCNDBP1-208ENST00000566515 IGLV7-43P04211 117 aa12.84□□□□□ -0.35
CCNDBP1-208ENST00000566515 IGKV2-28A0A075B6P5 120 aa12.83□□□□□ -0.36
CCNDBP1-208ENST00000566515 IGKV2D-28P01615 120 aa12.83□□□□□ -0.36
CCNDBP1-208ENST00000566515 SPINK6Q6UWN8 80 aa12.82□□□□□ -0.36
CCNDBP1-208ENST00000566515 NPC2P61916 151 aa12.81□□□□□ -0.36
CCNDBP1-208ENST00000566515 PCP2Q8IVA1 136 aa12.81□□□□□ -0.36
CCNDBP1-208ENST00000566515 LITAFQ99732 161 aa12.81□□□□□ -0.36
CCNDBP1-208ENST00000566515 LOC107984156A0A0G2JMH3 177 aa12.8□□□□□ -0.36
CCNDBP1-208ENST00000566515 ARL17AQ8IVW1 177 aa12.8□□□□□ -0.36
CCNDBP1-208ENST00000566515 LRP1Q07954 4544 aaKnown RBP12.8□□□□□ -0.36
CCNDBP1-208ENST00000566515 IGLV1-50A0A075B6I6 118 aa12.8□□□□□ -0.36
CCNDBP1-208ENST00000566515 NCR3O14931 201 aa12.8□□□□□ -0.36
CCNDBP1-208ENST00000566515 MIEN1Q9BRT3 115 aa12.8□□□□□ -0.36
CCNDBP1-208ENST00000566515 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
CCNDBP1-208ENST00000566515 M0R378 163 aa12.79□□□□□ -0.36
CCNDBP1-208ENST00000566515 EIF4EBP3O60516 100 aaPredicted RBP12.79□□□□□ -0.36
CCNDBP1-208ENST00000566515 TIMM17BO60830 172 aa12.79□□□□□ -0.36
CCNDBP1-208ENST00000566515 SOSTDC1Q6X4U4 206 aa12.79□□□□□ -0.36
CCNDBP1-208ENST00000566515 SCGB1D4Q6XE38 83 aa12.77□□□□□ -0.36
CCNDBP1-208ENST00000566515 KRTAP29-1A8MX34 341 aaPredicted RBP12.77□□□□□ -0.37
CCNDBP1-208ENST00000566515 BCE1O60756 84 aa12.76□□□□□ -0.37
CCNDBP1-208ENST00000566515 TMEM238C9JI98 176 aa12.75□□□□□ -0.37
CCNDBP1-208ENST00000566515 LINC00518Q8N0U6 118 aa12.75□□□□□ -0.37
CCNDBP1-208ENST00000566515 OXTP01178 125 aa12.74□□□□□ -0.37
CCNDBP1-208ENST00000566515 LINC00308Q8TCZ7 52 aa12.74□□□□□ -0.37
CCNDBP1-208ENST00000566515 FAT3Q8TDW7 4589 aa12.74□□□□□ -0.37
CCNDBP1-208ENST00000566515 DMBT1Q9UGM3 2413 aaPredicted RBP12.73□□□□□ -0.37
CCNDBP1-208ENST00000566515 J3QL48 77 aa12.73□□□□□ -0.37
CCNDBP1-208ENST00000566515 DIRC1Q969H9 104 aa12.73□□□□□ -0.37
CCNDBP1-208ENST00000566515 ZNF861PO60384 105 aa12.72□□□□□ -0.37
CCNDBP1-208ENST00000566515 REG3GQ6UW15 175 aa12.72□□□□□ -0.37
CCNDBP1-208ENST00000566515 TMEM126AQ9H061 195 aa12.72□□□□□ -0.37
CCNDBP1-208ENST00000566515 TRBV10-3A0A0K0K1G6 114 aa12.7□□□□□ -0.38
CCNDBP1-208ENST00000566515 NDUFC2O95298 119 aa12.7□□□□□ -0.38
CCNDBP1-208ENST00000566515 SPANXB1Q9NS25 103 aaPredicted RBP12.7□□□□□ -0.38
CCNDBP1-208ENST00000566515 H0Y9J4 135 aa12.7□□□□□ -0.38
CCNDBP1-208ENST00000566515 JOSD1Q15040 202 aaPredicted RBP12.7□□□□□ -0.38
CCNDBP1-208ENST00000566515 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
CCNDBP1-208ENST00000566515 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
CCNDBP1-208ENST00000566515 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
CCNDBP1-208ENST00000566515 RPL28P46779 137 aaKnown RBP12.68□□□□□ -0.38
CCNDBP1-208ENST00000566515 UBE2AP49459 152 aa12.67□□□□□ -0.38
CCNDBP1-208ENST00000566515 DDTP30046 118 aa12.66□□□□□ -0.38
CCNDBP1-208ENST00000566515 FAM19A1Q7Z5A9 133 aa12.66□□□□□ -0.38
CCNDBP1-208ENST00000566515 PRLHP81277 87 aa12.66□□□□□ -0.38
CCNDBP1-208ENST00000566515 KRTAP13-1Q8IUC0 172 aa12.66□□□□□ -0.38
CCNDBP1-208ENST00000566515 LINC01600Q96MT4 127 aa12.66□□□□□ -0.38
CCNDBP1-208ENST00000566515 KCNQ1DNQ9H478 68 aa12.66□□□□□ -0.38
CCNDBP1-208ENST00000566515 PRYO14603 147 aa12.65□□□□□ -0.38
CCNDBP1-208ENST00000566515 SMIM6P0DI80 62 aa12.64□□□□□ -0.39
CCNDBP1-208ENST00000566515 S100A7L2Q5SY68 101 aa12.64□□□□□ -0.39
CCNDBP1-208ENST00000566515 C12orf57Q99622 126 aa12.64□□□□□ -0.39
CCNDBP1-208ENST00000566515 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
CCNDBP1-208ENST00000566515 IGLV6-57P01721 117 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 MT1HL1P0DM35 61 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 Q6ZVH6 145 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 MUSTN1Q8IVN3 82 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 COX8AP10176 69 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 IFITM1P13164 125 aa12.62□□□□□ -0.39
CCNDBP1-208ENST00000566515 PYY3Q5JQD4 70 aa12.61□□□□□ -0.39
CCNDBP1-208ENST00000566515 SPRR1AP35321 89 aa12.6□□□□□ -0.39
CCNDBP1-208ENST00000566515 S100A12P80511 92 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms