RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
LINC00563-201ENST00000566370 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
LINC00563-201ENST00000566370 DNAH10OSP0CZ25 163 aa8.97□□□□□ -0.97
LINC00563-201ENST00000566370 Q6Q795 121 aa8.97□□□□□ -0.97
LINC00563-201ENST00000566370 C6orf48Q9UBA6 75 aa8.97□□□□□ -0.97
LINC00563-201ENST00000566370 JMJD7-PLA2G4BH0Y9G9 81 aa8.97□□□□□ -0.97
LINC00563-201ENST00000566370 TMEM256-PLSCR3K7ERE1 68 aa8.97□□□□□ -0.97
LINC00563-201ENST00000566370 HIGD2BQ4VC39 106 aa8.96□□□□□ -0.98
LINC00563-201ENST00000566370 Q8N814 137 aa8.96□□□□□ -0.98
LINC00563-201ENST00000566370 LINC00526Q96FQ7 95 aa8.96□□□□□ -0.98
LINC00563-201ENST00000566370 LINC00167Q96N53 147 aa8.96□□□□□ -0.98
LINC00563-201ENST00000566370 RPL18AQ02543 176 aaKnown RBP8.95□□□□□ -0.98
LINC00563-201ENST00000566370 C6orf99Q4VX62 202 aa8.95□□□□□ -0.98
LINC00563-201ENST00000566370 NDUFC2-KCTD14E9PQ53 114 aa8.94□□□□□ -0.98
LINC00563-201ENST00000566370 IGLV6-57P01721 117 aa8.94□□□□□ -0.98
LINC00563-201ENST00000566370 PRR3P79522 188 aaKnown RBP8.94□□□□□ -0.98
LINC00563-201ENST00000566370 GAGE2AQ6NT46 116 aa8.94□□□□□ -0.98
LINC00563-201ENST00000566370 KRTAP26-1Q6PEX3 210 aa8.94□□□□□ -0.98
LINC00563-201ENST00000566370 DIRC1Q969H9 104 aa8.94□□□□□ -0.98
LINC00563-201ENST00000566370 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
LINC00563-201ENST00000566370 TTC32Q5I0X7 151 aa8.93□□□□□ -0.98
LINC00563-201ENST00000566370 LINC00643Q86TS7 51 aa8.93□□□□□ -0.98
LINC00563-201ENST00000566370 TRAV23DV6A0A075B6W5 121 aa8.92□□□□□ -0.98
LINC00563-201ENST00000566370 hADV29S1A0JD25 119 aa8.92□□□□□ -0.98
LINC00563-201ENST00000566370 K7EIL1 84 aa8.92□□□□□ -0.98
LINC00563-201ENST00000566370 M0R378 163 aa8.92□□□□□ -0.98
LINC00563-201ENST00000566370 C15orf56Q8N910 161 aa8.92□□□□□ -0.98
LINC00563-201ENST00000566370 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
LINC00563-201ENST00000566370 TRBV7-6A0A0J9YX20 115 aa8.91□□□□□ -0.98
LINC00563-201ENST00000566370 LINC00575Q6W349 94 aa8.91□□□□□ -0.98
LINC00563-201ENST00000566370 Q6ZRU5 148 aa8.91□□□□□ -0.98
LINC00563-201ENST00000566370 IMUPQ9GZP8 106 aa8.91□□□□□ -0.98
LINC00563-201ENST00000566370 OBSCN-AS1Q96MR7 158 aa8.9□□□□□ -0.98
LINC00563-201ENST00000566370 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.98
LINC00563-201ENST00000566370 TRBV10-3A0A0K0K1G6 114 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 SLPIP03973 132 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 COX7BP24311 80 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 ANAPC13Q9BS18 74 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 UPK3BQ9BT76 320 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 C14orf132Q9NPU4 83 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 C22orf24Q9Y442 160 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 LINC00588Q9Y4M8 146 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 FLNBO75369 2602 aaKnown RBP8.88□□□□□ -0.99
LINC00563-201ENST00000566370 TRBV7-7A0A0K0K1E9 115 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 PRB2P02812 416 aaPredicted RBP8.88□□□□□ -0.99
LINC00563-201ENST00000566370 NKAPP1Q8N9T2 125 aa8.88□□□□□ -0.99
LINC00563-201ENST00000566370 ZNF73O43830 326 aaPredicted RBP8.87□□□□□ -0.99
LINC00563-201ENST00000566370 VPREB1P12018 145 aa8.87□□□□□ -0.99
LINC00563-201ENST00000566370 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.86□□□□□ -0.99
LINC00563-201ENST00000566370 Q8NDZ9 215 aa8.86□□□□□ -0.99
LINC00563-201ENST00000566370 CCKP06307 115 aa8.85□□□□□ -0.99
LINC00563-201ENST00000566370 TLX1NBP0CAT3 122 aa8.85□□□□□ -0.99
LINC00563-201ENST00000566370 SDIM1Q6ZPB5 146 aa8.85□□□□□ -0.99
LINC00563-201ENST00000566370 PDE6GP18545 87 aa8.84□□□□□ -0.99
LINC00563-201ENST00000566370 LAMTOR3Q9UHA4 124 aa8.84□□□□□ -0.99
LINC00563-201ENST00000566370 ELOF1P60002 83 aaKnown RBP8.83□□□□□ -1
LINC00563-201ENST00000566370 STAB1Q9NY15 2570 aa8.83□□□□□ -1
LINC00563-201ENST00000566370 MAST4O15021 2626 aa8.83□□□□□ -1
LINC00563-201ENST00000566370 USP17L23D6RBM5 183 aa8.82□□□□□ -1
LINC00563-201ENST00000566370 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
LINC00563-201ENST00000566370 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
LINC00563-201ENST00000566370 PLA2G2DQ9UNK4 145 aa8.82□□□□□ -1
LINC00563-201ENST00000566370 RBM3P98179 157 aaKnown RBP8.81□□□□□ -1
LINC00563-201ENST00000566370 C4orf48Q5BLP8 95 aa8.81□□□□□ -1
LINC00563-201ENST00000566370 Q6ZQY7 126 aa8.8□□□□□ -1
LINC00563-201ENST00000566370 Q6ZRP5 223 aa8.8□□□□□ -1
LINC00563-201ENST00000566370 BAHCC1Q9P281 2608 aa8.8□□□□□ -1
LINC00563-201ENST00000566370 ATP5EP2Q5VTU8 51 aa8.8□□□□□ -1
LINC00563-201ENST00000566370 Q6JHZ5 121 aa8.8□□□□□ -1
LINC00563-201ENST00000566370 DSCR8Q96T75 97 aa8.8□□□□□ -1
LINC00563-201ENST00000566370 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
LINC00563-201ENST00000566370 B9D2Q9BPU9 175 aa8.79□□□□□ -1
LINC00563-201ENST00000566370 LOC110117498A0A087WWA1 95 aa8.78□□□□□ -1
LINC00563-201ENST00000566370 SMCR5Q8TEV8 140 aa8.78□□□□□ -1
LINC00563-201ENST00000566370 UBL5Q9BZL1 73 aa8.78□□□□□ -1
LINC00563-201ENST00000566370 PKIGQ9Y2B9 76 aa8.78□□□□□ -1
LINC00563-201ENST00000566370 C14orf177Q52M58 125 aa8.77□□□□□ -1.01
LINC00563-201ENST00000566370 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
LINC00563-201ENST00000566370 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
LINC00563-201ENST00000566370 PRYO14603 147 aa8.76□□□□□ -1.01
LINC00563-201ENST00000566370 PSCAO43653 123 aa8.76□□□□□ -1.01
LINC00563-201ENST00000566370 NHLRC4P0CG21 123 aaPredicted RBP8.75□□□□□ -1.01
LINC00563-201ENST00000566370 KCNQ1DNQ9H478 68 aa8.75□□□□□ -1.01
LINC00563-201ENST00000566370 LINC00528Q8N1L1 170 aa8.74□□□□□ -1.01
LINC00563-201ENST00000566370 LINC00846Q9NV44 126 aa8.74□□□□□ -1.01
LINC00563-201ENST00000566370 DHRS4-AS1Q9P1J3 65 aa8.74□□□□□ -1.01
LINC00563-201ENST00000566370 FBN1P35555 2871 aaKnown RBP8.73□□□□□ -1.01
LINC00563-201ENST00000566370 FAM236AA0A1B0GUQ0 79 aa8.73□□□□□ -1.01
LINC00563-201ENST00000566370 FAM236BA0A1B0GV22 79 aa8.73□□□□□ -1.01
LINC00563-201ENST00000566370 NUPR2A6NF83 97 aa8.73□□□□□ -1.01
LINC00563-201ENST00000566370 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
LINC00563-201ENST00000566370 Q6ZQT0 140 aa8.72□□□□□ -1.01
LINC00563-201ENST00000566370 TRRAPQ9Y4A5 3859 aa8.72□□□□□ -1.01
LINC00563-201ENST00000566370 ETDCA0A1B0GVM5 59 aa8.71□□□□□ -1.01
LINC00563-201ENST00000566370 J3QL48 77 aa8.71□□□□□ -1.01
LINC00563-201ENST00000566370 APLNQ9ULZ1 77 aa8.71□□□□□ -1.02
LINC00563-201ENST00000566370 COL6A5A8TX70 2615 aa8.7□□□□□ -1.02
LINC00563-201ENST00000566370 TENM3Q9P273 2699 aa8.7□□□□□ -1.02
LINC00563-201ENST00000566370 ATOX1O00244 68 aa8.7□□□□□ -1.02
LINC00563-201ENST00000566370 SERTAD4-AS1Q5TG53 156 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms