RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RPL18AQ02543 176 aaKnown RBP9.72□□□□□ -0.85
RNF40-205ENST00000563909 GAGE2BQ13066 116 aa9.72□□□□□ -0.85
RNF40-205ENST00000563909 PLEKHB2Q96CS7 222 aa9.72□□□□□ -0.85
RNF40-205ENST00000563909 NDUFC2-KCTD14E9PQ53 114 aa9.71□□□□□ -0.86
RNF40-205ENST00000563909 LEPROTO15243 131 aa9.71□□□□□ -0.86
RNF40-205ENST00000563909 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
RNF40-205ENST00000563909 C9orf116Q5BN46 136 aaPredicted RBP9.7□□□□□ -0.86
RNF40-205ENST00000563909 PRR26Q8N8Z3 221 aa9.7□□□□□ -0.86
RNF40-205ENST00000563909 LCE2DQ5TA82 110 aaPredicted RBP9.69□□□□□ -0.86
RNF40-205ENST00000563909 E9PLD3 99 aa9.68□□□□□ -0.86
RNF40-205ENST00000563909 ZNF625Q96I27 306 aaPredicted RBP9.68□□□□□ -0.86
RNF40-205ENST00000563909 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
RNF40-205ENST00000563909 MYMXA0A1B0GTQ4 84 aa9.67□□□□□ -0.86
RNF40-205ENST00000563909 J3QQQ9 107 aa9.67□□□□□ -0.86
RNF40-205ENST00000563909 LGALS3P17931 250 aaKnown RBP9.67□□□□□ -0.86
RNF40-205ENST00000563909 HERV-K104P63124 156 aa9.67□□□□□ -0.86
RNF40-205ENST00000563909 GAGE2EQ4V326 116 aa9.67□□□□□ -0.86
RNF40-205ENST00000563909 GAGE2DQ9UEU5 116 aa9.67□□□□□ -0.86
RNF40-205ENST00000563909 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
RNF40-205ENST00000563909 NMUP48645 174 aa9.66□□□□□ -0.86
RNF40-205ENST00000563909 COX17Q14061 63 aa9.66□□□□□ -0.86
RNF40-205ENST00000563909 ERG28Q9UKR5 140 aa9.66□□□□□ -0.86
RNF40-205ENST00000563909 LINC00587B1AMM8 73 aa9.64□□□□□ -0.87
RNF40-205ENST00000563909 PFN2P35080 140 aa9.64□□□□□ -0.87
RNF40-205ENST00000563909 TSPEAR-AS2P59090 65 aa9.64□□□□□ -0.87
RNF40-205ENST00000563909 ATOH7Q8N100 152 aa9.64□□□□□ -0.87
RNF40-205ENST00000563909 SCGB1D1O95968 90 aa9.63□□□□□ -0.87
RNF40-205ENST00000563909 MEIG1Q5JSS6 88 aa9.62□□□□□ -0.87
RNF40-205ENST00000563909 LINC00158P58513 81 aa9.61□□□□□ -0.87
RNF40-205ENST00000563909 C9orf129Q5T035 196 aaKnown RBP9.61□□□□□ -0.87
RNF40-205ENST00000563909 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
RNF40-205ENST00000563909 HSBP1L1C9JCN9 74 aa9.6□□□□□ -0.87
RNF40-205ENST00000563909 XAGE1AQ9HD64 81 aa9.6□□□□□ -0.87
RNF40-205ENST00000563909 IGKV2D-26A0A0A0MRZ7 120 aa9.59□□□□□ -0.87
RNF40-205ENST00000563909 SMIM13P0DJ93 91 aa9.58□□□□□ -0.88
RNF40-205ENST00000563909 ANKRD39Q53RE8 183 aa9.58□□□□□ -0.88
RNF40-205ENST00000563909 A0A0U1RRA0 63 aa9.57□□□□□ -0.88
RNF40-205ENST00000563909 FAM168BA1KXE4 195 aa9.57□□□□□ -0.88
RNF40-205ENST00000563909 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
RNF40-205ENST00000563909 A0A0J9YXY3 114 aa9.56□□□□□ -0.88
RNF40-205ENST00000563909 ZNF815PA8K554 130 aa9.56□□□□□ -0.88
RNF40-205ENST00000563909 FAM19A5Q7Z5A7 132 aaPredicted RBP9.56□□□□□ -0.88
RNF40-205ENST00000563909 DIRC1Q969H9 104 aa9.56□□□□□ -0.88
RNF40-205ENST00000563909 JOSD1Q15040 202 aaPredicted RBP9.55□□□□□ -0.88
RNF40-205ENST00000563909 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
RNF40-205ENST00000563909 MIR7-3HGQ8N6C7 128 aa9.55□□□□□ -0.88
RNF40-205ENST00000563909 IGLV1-50A0A075B6I6 118 aa9.54□□□□□ -0.88
RNF40-205ENST00000563909 M0QXV9 152 aa9.53□□□□□ -0.88
RNF40-205ENST00000563909 KRTAP7-1Q8IUC3 87 aa9.53□□□□□ -0.88
RNF40-205ENST00000563909 TTTY13Q9BZ97 58 aa9.53□□□□□ -0.88
RNF40-205ENST00000563909 TIMM17BO60830 172 aa9.52□□□□□ -0.89
RNF40-205ENST00000563909 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
RNF40-205ENST00000563909 PHF5AQ7RTV0 110 aaKnown RBP9.52□□□□□ -0.89
RNF40-205ENST00000563909 C22orf24Q9Y442 160 aa9.52□□□□□ -0.89
RNF40-205ENST00000563909 IGLV5-37A0A075B6J1 123 aa9.51□□□□□ -0.89
RNF40-205ENST00000563909 LBHQ53QV2 105 aaPredicted RBP9.51□□□□□ -0.89
RNF40-205ENST00000563909 SCGB1D4Q6XE38 83 aa9.51□□□□□ -0.89
RNF40-205ENST00000563909 PCP2Q8IVA1 136 aa9.51□□□□□ -0.89
RNF40-205ENST00000563909 TP73-AS1Q9UF72 201 aa9.51□□□□□ -0.89
RNF40-205ENST00000563909 NKAPP1Q8N9T2 125 aa9.5□□□□□ -0.89
RNF40-205ENST00000563909 LOC107984156A0A0G2JMH3 177 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 H0Y9J4 135 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 TSPAN13O95857 204 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 ARL17AQ8IVW1 177 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 DAND5Q8N907 189 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 MIEN1Q9BRT3 115 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 MUC17Q685J3 4493 aa9.49□□□□□ -0.89
RNF40-205ENST00000563909 IGLV7-43P04211 117 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 VPREB1P12018 145 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 UBE2BP63146 152 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 PYY3Q5JQD4 70 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
RNF40-205ENST00000563909 BOD1L2Q8IYS8 172 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 VAMP8Q9BV40 100 aa9.48□□□□□ -0.89
RNF40-205ENST00000563909 TMEM238C9JI98 176 aa9.47□□□□□ -0.89
RNF40-205ENST00000563909 LITAFQ99732 161 aa9.47□□□□□ -0.89
RNF40-205ENST00000563909 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
RNF40-205ENST00000563909 RPL13AP40429 203 aaKnown RBP9.46□□□□□ -0.9
RNF40-205ENST00000563909 PAM16Q9Y3D7 125 aa9.46□□□□□ -0.9
RNF40-205ENST00000563909 SPATA45Q537H7 98 aa9.45□□□□□ -0.9
RNF40-205ENST00000563909 LINC00167Q96N53 147 aa9.45□□□□□ -0.9
RNF40-205ENST00000563909 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
RNF40-205ENST00000563909 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
RNF40-205ENST00000563909 COX8AP10176 69 aa9.44□□□□□ -0.9
RNF40-205ENST00000563909 Q6ZVH6 145 aa9.44□□□□□ -0.9
RNF40-205ENST00000563909 Q8NDZ9 215 aa9.44□□□□□ -0.9
RNF40-205ENST00000563909 COPS9Q8WXC6 57 aa9.44□□□□□ -0.9
RNF40-205ENST00000563909 M0R378 163 aa9.43□□□□□ -0.9
RNF40-205ENST00000563909 NDUFC2O95298 119 aa9.43□□□□□ -0.9
RNF40-205ENST00000563909 NPC2P61916 151 aa9.43□□□□□ -0.9
RNF40-205ENST00000563909 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
RNF40-205ENST00000563909 GAGE10A6NGK3 116 aa9.42□□□□□ -0.9
RNF40-205ENST00000563909 DLEU1O43261 78 aa9.42□□□□□ -0.9
RNF40-205ENST00000563909 LINC01547P58512 204 aaPredicted RBP9.42□□□□□ -0.9
RNF40-205ENST00000563909 SOSTDC1Q6X4U4 206 aa9.42□□□□□ -0.9
RNF40-205ENST00000563909 RPL37AP8A6NKH3 93 aa9.41□□□□□ -0.9
RNF40-205ENST00000563909 IFITM1P13164 125 aa9.41□□□□□ -0.9
RNF40-205ENST00000563909 KRTAP11-1Q8IUC1 163 aa9.41□□□□□ -0.9
RNF40-205ENST00000563909 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms