RNA–Protein interactions for RNA: ENST00000563425.2

CDH5-204, Transcript of cadherin 5, humanhuman

TSL 5 BASIC

Gene CDH5, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-204ENST00000563425 TRAV10A0A0B4J240 114 aa13.01□□□□□ -0.33
CDH5-204ENST00000563425 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
CDH5-204ENST00000563425 HIGD2BQ4VC39 106 aa13□□□□□ -0.33
CDH5-204ENST00000563425 C15orf56Q8N910 161 aa13□□□□□ -0.33
CDH5-204ENST00000563425 C1orf43Q9BWL3 253 aa13□□□□□ -0.33
CDH5-204ENST00000563425 C15orf53Q8NAA6 179 aa12.99□□□□□ -0.33
CDH5-204ENST00000563425 DNAH10OSP0CZ25 163 aa12.98□□□□□ -0.33
CDH5-204ENST00000563425 CAMK2N2Q96S95 79 aa12.98□□□□□ -0.33
CDH5-204ENST00000563425 S100A7L2Q5SY68 101 aa12.98□□□□□ -0.33
CDH5-204ENST00000563425 A0A1B0GX51 115 aa12.97□□□□□ -0.33
CDH5-204ENST00000563425 MRAPQ8TCY5 172 aa12.97□□□□□ -0.33
CDH5-204ENST00000563425 C2orf48Q96LS8 159 aa12.96□□□□□ -0.33
CDH5-204ENST00000563425 LINC00167Q96N53 147 aa12.96□□□□□ -0.33
CDH5-204ENST00000563425 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.34
CDH5-204ENST00000563425 ACYP1P07311 99 aa12.95□□□□□ -0.34
CDH5-204ENST00000563425 IGKV2D-24A0A075B6R9 120 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 IGLV6-57P01721 117 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 Q6ZRU5 148 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 SNCGO76070 127 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 SLPIP03973 132 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 RPL18AQ02543 176 aaKnown RBP12.94□□□□□ -0.34
CDH5-204ENST00000563425 C6orf99Q4VX62 202 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 Q8N814 137 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 ORMDL1Q9P0S3 153 aa12.94□□□□□ -0.34
CDH5-204ENST00000563425 XAGE1AQ9HD64 81 aa12.93□□□□□ -0.34
CDH5-204ENST00000563425 LINC00588Q9Y4M8 146 aa12.93□□□□□ -0.34
CDH5-204ENST00000563425 F8WDY8 70 aa12.92□□□□□ -0.34
CDH5-204ENST00000563425 OBSCN-AS1Q96MR7 158 aa12.92□□□□□ -0.34
CDH5-204ENST00000563425 C9orf129Q5T035 196 aaKnown RBP12.9□□□□□ -0.34
CDH5-204ENST00000563425 NDUFC2-KCTD14E9PQ53 114 aa12.88□□□□□ -0.35
CDH5-204ENST00000563425 LINC00575Q6W349 94 aa12.88□□□□□ -0.35
CDH5-204ENST00000563425 TRBV10-3A0A0K0K1G6 114 aa12.87□□□□□ -0.35
CDH5-204ENST00000563425 TTC32Q5I0X7 151 aa12.87□□□□□ -0.35
CDH5-204ENST00000563425 VPREB1P12018 145 aa12.86□□□□□ -0.35
CDH5-204ENST00000563425 MGAM2Q2M2H8 2515 aa12.86□□□□□ -0.35
CDH5-204ENST00000563425 HUWE1Q7Z6Z7 4374 aaKnown RBP12.85□□□□□ -0.35
CDH5-204ENST00000563425 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
CDH5-204ENST00000563425 GAGE2BQ13066 116 aa12.85□□□□□ -0.35
CDH5-204ENST00000563425 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
CDH5-204ENST00000563425 Q6Q795 121 aa12.85□□□□□ -0.35
CDH5-204ENST00000563425 C14orf132Q9NPU4 83 aa12.85□□□□□ -0.35
CDH5-204ENST00000563425 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
CDH5-204ENST00000563425 GAGE2AQ6NT46 116 aa12.84□□□□□ -0.35
CDH5-204ENST00000563425 SDIM1Q6ZPB5 146 aa12.84□□□□□ -0.35
CDH5-204ENST00000563425 TRAV23DV6A0A075B6W5 121 aa12.83□□□□□ -0.36
CDH5-204ENST00000563425 TMEM256-PLSCR3K7ERE1 68 aa12.83□□□□□ -0.36
CDH5-204ENST00000563425 Q6ZRP5 223 aa12.82□□□□□ -0.36
CDH5-204ENST00000563425 SMCR5Q8TEV8 140 aa12.82□□□□□ -0.36
CDH5-204ENST00000563425 UPK3BQ9BT76 320 aa12.82□□□□□ -0.36
CDH5-204ENST00000563425 hADV29S1A0JD25 119 aa12.81□□□□□ -0.36
CDH5-204ENST00000563425 M0R378 163 aa12.81□□□□□ -0.36
CDH5-204ENST00000563425 DIRC1Q969H9 104 aa12.8□□□□□ -0.36
CDH5-204ENST00000563425 A0A1B0GV72 72 aa12.78□□□□□ -0.36
CDH5-204ENST00000563425 JMJD7-PLA2G4BH0Y9G9 81 aa12.78□□□□□ -0.36
CDH5-204ENST00000563425 ZNF73O43830 326 aaPredicted RBP12.78□□□□□ -0.36
CDH5-204ENST00000563425 LINC00643Q86TS7 51 aa12.78□□□□□ -0.36
CDH5-204ENST00000563425 RMI2Q96E14 147 aa12.78□□□□□ -0.36
CDH5-204ENST00000563425 MDFIQ99750 246 aa12.78□□□□□ -0.36
CDH5-204ENST00000563425 TRBV7-7A0A0K0K1E9 115 aa12.78□□□□□ -0.36
CDH5-204ENST00000563425 TRBV7-6A0A0J9YX20 115 aa12.77□□□□□ -0.37
CDH5-204ENST00000563425 USP17L23D6RBM5 183 aa12.76□□□□□ -0.37
CDH5-204ENST00000563425 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
CDH5-204ENST00000563425 TLX1NBP0CAT3 122 aa12.76□□□□□ -0.37
CDH5-204ENST00000563425 COL7A1Q02388 2944 aa12.76□□□□□ -0.37
CDH5-204ENST00000563425 COX7BP24311 80 aa12.74□□□□□ -0.37
CDH5-204ENST00000563425 ELOF1P60002 83 aaKnown RBP12.74□□□□□ -0.37
CDH5-204ENST00000563425 CCKP06307 115 aa12.72□□□□□ -0.37
CDH5-204ENST00000563425 NDUFV3P56181 108 aaKnown RBP12.72□□□□□ -0.37
CDH5-204ENST00000563425 Q6ZQY7 126 aa12.72□□□□□ -0.37
CDH5-204ENST00000563425 IMUPQ9GZP8 106 aa12.72□□□□□ -0.37
CDH5-204ENST00000563425 STAB2Q8WWQ8 2551 aa12.71□□□□□ -0.37
CDH5-204ENST00000563425 H3BQ85 93 aa12.7□□□□□ -0.38
CDH5-204ENST00000563425 ANAPC13Q9BS18 74 aa12.7□□□□□ -0.38
CDH5-204ENST00000563425 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
CDH5-204ENST00000563425 LINC00846Q9NV44 126 aa12.69□□□□□ -0.38
CDH5-204ENST00000563425 SERTAD4-AS1Q5TG53 156 aa12.68□□□□□ -0.38
CDH5-204ENST00000563425 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.68□□□□□ -0.38
CDH5-204ENST00000563425 PLA2G2DQ9UNK4 145 aa12.68□□□□□ -0.38
CDH5-204ENST00000563425 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
CDH5-204ENST00000563425 NKAPP1Q8N9T2 125 aa12.68□□□□□ -0.38
CDH5-204ENST00000563425 LINC00528Q8N1L1 170 aa12.66□□□□□ -0.38
CDH5-204ENST00000563425 NHLRC4P0CG21 123 aaPredicted RBP12.66□□□□□ -0.38
CDH5-204ENST00000563425 RBM3P98179 157 aaKnown RBP12.65□□□□□ -0.38
CDH5-204ENST00000563425 C7orf33Q8WU49 177 aa12.65□□□□□ -0.38
CDH5-204ENST00000563425 KCNQ1DNQ9H478 68 aa12.65□□□□□ -0.38
CDH5-204ENST00000563425 APLNQ9ULZ1 77 aa12.65□□□□□ -0.38
CDH5-204ENST00000563425 KRTAP1-5Q9BYS1 174 aa12.64□□□□□ -0.39
CDH5-204ENST00000563425 LAMTOR3Q9UHA4 124 aa12.64□□□□□ -0.39
CDH5-204ENST00000563425 IGLV5-37A0A075B6J1 123 aa12.63□□□□□ -0.39
CDH5-204ENST00000563425 DNAH9Q9NYC9 4486 aa12.63□□□□□ -0.39
CDH5-204ENST00000563425 LOC110117498A0A087WWA1 95 aa12.62□□□□□ -0.39
CDH5-204ENST00000563425 GHRHP01286 108 aa12.62□□□□□ -0.39
CDH5-204ENST00000563425 Q6JHZ5 121 aa12.62□□□□□ -0.39
CDH5-204ENST00000563425 Q6ZQT0 140 aa12.62□□□□□ -0.39
CDH5-204ENST00000563425 UBE2DNLQ8IWF7 75 aa12.6□□□□□ -0.39
CDH5-204ENST00000563425 LOC107984640A0A0U1RRK4 108 aa12.59□□□□□ -0.39
CDH5-204ENST00000563425 FAM168BA1KXE4 195 aa12.59□□□□□ -0.39
CDH5-204ENST00000563425 KRTAP7-1Q8IUC3 87 aa12.57□□□□□ -0.4
CDH5-204ENST00000563425 FAM236AA0A1B0GUQ0 79 aa12.56□□□□□ -0.4
CDH5-204ENST00000563425 FAM236BA0A1B0GV22 79 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms