RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 TSPEAR-AS2P59090 65 aa9.78□□□□□ -0.84
USB1-208ENST00000563207 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
USB1-208ENST00000563207 C7orf33Q8WU49 177 aa9.78□□□□□ -0.84
USB1-208ENST00000563207 LINC00158P58513 81 aa9.77□□□□□ -0.85
USB1-208ENST00000563207 PLA2G2DQ9UNK4 145 aa9.77□□□□□ -0.85
USB1-208ENST00000563207 MEIG1Q5JSS6 88 aa9.76□□□□□ -0.85
USB1-208ENST00000563207 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
USB1-208ENST00000563207 HSBP1L1C9JCN9 74 aa9.74□□□□□ -0.85
USB1-208ENST00000563207 SCGB1D1O95968 90 aa9.74□□□□□ -0.85
USB1-208ENST00000563207 ATOH7Q8N100 152 aa9.74□□□□□ -0.85
USB1-208ENST00000563207 SND1-IT1Q9HBX3 110 aa9.74□□□□□ -0.85
USB1-208ENST00000563207 TMA7Q9Y2S6 64 aaKnown RBP9.74□□□□□ -0.85
USB1-208ENST00000563207 TNXBP22105 4242 aa9.73□□□□□ -0.85
USB1-208ENST00000563207 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
USB1-208ENST00000563207 SMIM13P0DJ93 91 aa9.73□□□□□ -0.85
USB1-208ENST00000563207 FAM19A5Q7Z5A7 132 aaPredicted RBP9.73□□□□□ -0.85
USB1-208ENST00000563207 TP73-AS1Q9UF72 201 aa9.73□□□□□ -0.85
USB1-208ENST00000563207 IGKV2D-26A0A0A0MRZ7 120 aa9.72□□□□□ -0.85
USB1-208ENST00000563207 A0A0J9YXY3 114 aa9.71□□□□□ -0.86
USB1-208ENST00000563207 M0QXV9 152 aa9.71□□□□□ -0.86
USB1-208ENST00000563207 RPL24P83731 157 aaKnown RBP9.71□□□□□ -0.86
USB1-208ENST00000563207 LBHQ53QV2 105 aaPredicted RBP9.71□□□□□ -0.86
USB1-208ENST00000563207 ANKRD39Q53RE8 183 aa9.71□□□□□ -0.86
USB1-208ENST00000563207 KRTAP7-1Q8IUC3 87 aa9.71□□□□□ -0.86
USB1-208ENST00000563207 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
USB1-208ENST00000563207 A0A0U1RRA0 63 aa9.7□□□□□ -0.86
USB1-208ENST00000563207 ZNF815PA8K554 130 aa9.7□□□□□ -0.86
USB1-208ENST00000563207 PRR3P79522 188 aaKnown RBP9.7□□□□□ -0.86
USB1-208ENST00000563207 MIR7-3HGQ8N6C7 128 aa9.7□□□□□ -0.86
USB1-208ENST00000563207 C22orf24Q9Y442 160 aa9.7□□□□□ -0.86
USB1-208ENST00000563207 TIMM17BO60830 172 aa9.69□□□□□ -0.86
USB1-208ENST00000563207 PHF5AQ7RTV0 110 aaKnown RBP9.69□□□□□ -0.86
USB1-208ENST00000563207 LOC107984156A0A0G2JMH3 177 aa9.68□□□□□ -0.86
USB1-208ENST00000563207 JOSD1Q15040 202 aaPredicted RBP9.68□□□□□ -0.86
USB1-208ENST00000563207 ARL17AQ8IVW1 177 aa9.68□□□□□ -0.86
USB1-208ENST00000563207 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
USB1-208ENST00000563207 MRPL55Q7Z7F7 128 aaKnown RBP9.67□□□□□ -0.86
USB1-208ENST00000563207 MIEN1Q9BRT3 115 aa9.66□□□□□ -0.86
USB1-208ENST00000563207 VPREB1P12018 145 aa9.65□□□□□ -0.86
USB1-208ENST00000563207 UBE2BP63146 152 aa9.65□□□□□ -0.86
USB1-208ENST00000563207 SCGB1D4Q6XE38 83 aa9.65□□□□□ -0.86
USB1-208ENST00000563207 TTTY13Q9BZ97 58 aa9.65□□□□□ -0.86
USB1-208ENST00000563207 PCP2Q8IVA1 136 aa9.64□□□□□ -0.87
USB1-208ENST00000563207 BOD1L2Q8IYS8 172 aa9.64□□□□□ -0.87
USB1-208ENST00000563207 TMEM238C9JI98 176 aa9.63□□□□□ -0.87
USB1-208ENST00000563207 LINC01600Q96MT4 127 aa9.63□□□□□ -0.87
USB1-208ENST00000563207 LINC00167Q96N53 147 aa9.63□□□□□ -0.87
USB1-208ENST00000563207 LITAFQ99732 161 aa9.63□□□□□ -0.87
USB1-208ENST00000563207 PSORS1C2Q9UIG4 136 aa9.63□□□□□ -0.87
USB1-208ENST00000563207 ADAMTSL4-AS1Q5T5F5 129 aa9.62□□□□□ -0.87
USB1-208ENST00000563207 Q6ZVH6 145 aa9.62□□□□□ -0.87
USB1-208ENST00000563207 DAND5Q8N907 189 aa9.62□□□□□ -0.87
USB1-208ENST00000563207 COPS9Q8WXC6 57 aa9.62□□□□□ -0.87
USB1-208ENST00000563207 M0R378 163 aa9.61□□□□□ -0.87
USB1-208ENST00000563207 NDUFC2O95298 119 aa9.61□□□□□ -0.87
USB1-208ENST00000563207 SRSF9Q13242 221 aaKnown RBP eCLIP9.61□□□□□ -0.87
USB1-208ENST00000563207 LRP2P98164 4655 aa9.6□□□□□ -0.87
USB1-208ENST00000563207 VAMP8Q9BV40 100 aa9.6□□□□□ -0.87
USB1-208ENST00000563207 SPANXDQ9BXN6 97 aa9.6□□□□□ -0.87
USB1-208ENST00000563207 SPANXCQ9NY87 97 aa9.6□□□□□ -0.87
USB1-208ENST00000563207 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
USB1-208ENST00000563207 Q8NDZ9 215 aa9.59□□□□□ -0.87
USB1-208ENST00000563207 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
USB1-208ENST00000563207 PPDPFQ9H3Y8 114 aa9.59□□□□□ -0.87
USB1-208ENST00000563207 DLEU1O43261 78 aa9.58□□□□□ -0.88
USB1-208ENST00000563207 COX8AP10176 69 aa9.58□□□□□ -0.88
USB1-208ENST00000563207 IFITM1P13164 125 aa9.58□□□□□ -0.88
USB1-208ENST00000563207 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
USB1-208ENST00000563207 PYY3Q5JQD4 70 aa9.58□□□□□ -0.88
USB1-208ENST00000563207 C1orf137Q5JT78 98 aa9.58□□□□□ -0.88
USB1-208ENST00000563207 IGLV1-50A0A075B6I6 118 aa9.57□□□□□ -0.88
USB1-208ENST00000563207 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
USB1-208ENST00000563207 SPATA45Q537H7 98 aa9.57□□□□□ -0.88
USB1-208ENST00000563207 SPINK6Q6UWN8 80 aa9.57□□□□□ -0.88
USB1-208ENST00000563207 KRTAP11-1Q8IUC1 163 aa9.57□□□□□ -0.88
USB1-208ENST00000563207 SPANXB1Q9NS25 103 aaPredicted RBP9.57□□□□□ -0.88
USB1-208ENST00000563207 PAM16Q9Y3D7 125 aa9.57□□□□□ -0.88
USB1-208ENST00000563207 RPL37AP8A6NKH3 93 aa9.56□□□□□ -0.88
USB1-208ENST00000563207 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
USB1-208ENST00000563207 RNF213Q63HN8 5207 aa9.55□□□□□ -0.88
USB1-208ENST00000563207 IGKV2-28A0A075B6P5 120 aa9.54□□□□□ -0.88
USB1-208ENST00000563207 IGKV2D-28P01615 120 aa9.54□□□□□ -0.88
USB1-208ENST00000563207 IGLV7-43P04211 117 aa9.54□□□□□ -0.88
USB1-208ENST00000563207 NPC2P61916 151 aa9.54□□□□□ -0.88
USB1-208ENST00000563207 S100A12P80511 92 aa9.54□□□□□ -0.88
USB1-208ENST00000563207 NCR3O14931 201 aa9.53□□□□□ -0.88
USB1-208ENST00000563207 EIF4EBP3O60516 100 aaPredicted RBP9.53□□□□□ -0.88
USB1-208ENST00000563207 BCE1O60756 84 aa9.53□□□□□ -0.88
USB1-208ENST00000563207 LINC00518Q8N0U6 118 aa9.53□□□□□ -0.88
USB1-208ENST00000563207 SLC25A34Q6PIV7 304 aa9.52□□□□□ -0.89
USB1-208ENST00000563207 REG3GQ6UW15 175 aa9.52□□□□□ -0.89
USB1-208ENST00000563207 CBY1Q9Y3M2 126 aa9.52□□□□□ -0.89
USB1-208ENST00000563207 PRYO14603 147 aa9.51□□□□□ -0.89
USB1-208ENST00000563207 C14orf144Q96I85 54 aa9.51□□□□□ -0.89
USB1-208ENST00000563207 KCNQ1DNQ9H478 68 aa9.51□□□□□ -0.89
USB1-208ENST00000563207 DDTP30046 118 aa9.5□□□□□ -0.89
USB1-208ENST00000563207 S100A7L2Q5SY68 101 aa9.5□□□□□ -0.89
USB1-208ENST00000563207 MUSTN1Q8IVN3 82 aa9.5□□□□□ -0.89
USB1-208ENST00000563207 TMEM126AQ9H061 195 aa9.5□□□□□ -0.89
USB1-208ENST00000563207 HIGD1BQ9P298 99 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms