RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 C1orf43Q9BWL3 253 aa6.55□□□□□ -1.36
SMG1-205ENST00000561947 ZNF561-AS1K7EIQ3 104 aa6.54□□□□□ -1.36
SMG1-205ENST00000561947 SCGB1A1P11684 91 aa6.54□□□□□ -1.36
SMG1-205ENST00000561947 HIGD2BQ4VC39 106 aa6.54□□□□□ -1.36
SMG1-205ENST00000561947 C15orf56Q8N910 161 aa6.54□□□□□ -1.36
SMG1-205ENST00000561947 C22orf24Q9Y442 160 aa6.54□□□□□ -1.36
SMG1-205ENST00000561947 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
SMG1-205ENST00000561947 LECT2O14960 151 aa6.53□□□□□ -1.36
SMG1-205ENST00000561947 MT-ATP8P03928 68 aa6.53□□□□□ -1.36
SMG1-205ENST00000561947 NOTCH1P46531 2555 aa6.53□□□□□ -1.36
SMG1-205ENST00000561947 CAMK2N2Q96S95 79 aa6.53□□□□□ -1.36
SMG1-205ENST00000561947 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
SMG1-205ENST00000561947 C2orf48Q96LS8 159 aa6.53□□□□□ -1.36
SMG1-205ENST00000561947 S100A7L2Q5SY68 101 aa6.52□□□□□ -1.37
SMG1-205ENST00000561947 LINC00588Q9Y4M8 146 aa6.52□□□□□ -1.37
SMG1-205ENST00000561947 FAM240AA0A1B0GVK7 77 aa6.52□□□□□ -1.37
SMG1-205ENST00000561947 Q6ZRU5 148 aa6.51□□□□□ -1.37
SMG1-205ENST00000561947 A0A1B0GX51 115 aa6.51□□□□□ -1.37
SMG1-205ENST00000561947 DNAH1Q9P2D7 4330 aa6.51□□□□□ -1.37
SMG1-205ENST00000561947 F8WDY8 70 aa6.5□□□□□ -1.37
SMG1-205ENST00000561947 RPL18AQ02543 176 aaKnown RBP6.5□□□□□ -1.37
SMG1-205ENST00000561947 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
SMG1-205ENST00000561947 XAGE1AQ9HD64 81 aa6.5□□□□□ -1.37
SMG1-205ENST00000561947 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
SMG1-205ENST00000561947 C6orf99Q4VX62 202 aa6.5□□□□□ -1.37
SMG1-205ENST00000561947 INAFM2P0DMQ5 153 aa6.49□□□□□ -1.37
SMG1-205ENST00000561947 SLPIP03973 132 aa6.49□□□□□ -1.37
SMG1-205ENST00000561947 Q8N814 137 aa6.49□□□□□ -1.37
SMG1-205ENST00000561947 ORMDL1Q9P0S3 153 aa6.49□□□□□ -1.37
SMG1-205ENST00000561947 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
SMG1-205ENST00000561947 NBEAL1Q6ZS30 2694 aa6.48□□□□□ -1.37
SMG1-205ENST00000561947 NDUFC2-KCTD14E9PQ53 114 aa6.48□□□□□ -1.37
SMG1-205ENST00000561947 ACYP1P07311 99 aa6.48□□□□□ -1.37
SMG1-205ENST00000561947 MDFIQ99750 246 aa6.47□□□□□ -1.37
SMG1-205ENST00000561947 SNCGO76070 127 aa6.47□□□□□ -1.37
SMG1-205ENST00000561947 OBSCN-AS1Q96MR7 158 aa6.47□□□□□ -1.37
SMG1-205ENST00000561947 UPK3BQ9BT76 320 aa6.47□□□□□ -1.37
SMG1-205ENST00000561947 TRBV10-3A0A0K0K1G6 114 aa6.46□□□□□ -1.37
SMG1-205ENST00000561947 VPREB1P12018 145 aa6.46□□□□□ -1.37
SMG1-205ENST00000561947 SYCNQ0VAF6 134 aa6.46□□□□□ -1.37
SMG1-205ENST00000561947 C9orf129Q5T035 196 aaKnown RBP6.46□□□□□ -1.37
SMG1-205ENST00000561947 LINC00575Q6W349 94 aa6.46□□□□□ -1.38
SMG1-205ENST00000561947 TRAV23DV6A0A075B6W5 121 aa6.45□□□□□ -1.38
SMG1-205ENST00000561947 GAGE2EQ4V326 116 aa6.45□□□□□ -1.38
SMG1-205ENST00000561947 RMI2Q96E14 147 aa6.45□□□□□ -1.38
SMG1-205ENST00000561947 GAGE2DQ9UEU5 116 aa6.45□□□□□ -1.38
SMG1-205ENST00000561947 Q6ZRP5 223 aa6.44□□□□□ -1.38
SMG1-205ENST00000561947 TTC32Q5I0X7 151 aa6.44□□□□□ -1.38
SMG1-205ENST00000561947 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
SMG1-205ENST00000561947 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
SMG1-205ENST00000561947 TMEM256-PLSCR3K7ERE1 68 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 M0R378 163 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 GAGE2AQ6NT46 116 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 DYNC2H1Q8NCM8 4307 aaKnown RBP6.43□□□□□ -1.38
SMG1-205ENST00000561947 hADV29S1A0JD25 119 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 USP17L23D6RBM5 183 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 CASC10Q5T4H9 136 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 MGAM2Q2M2H8 2515 aa6.43□□□□□ -1.38
SMG1-205ENST00000561947 ZNF73O43830 326 aaPredicted RBP6.42□□□□□ -1.38
SMG1-205ENST00000561947 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
SMG1-205ENST00000561947 Q6Q795 121 aa6.42□□□□□ -1.38
SMG1-205ENST00000561947 TLX1NBP0CAT3 122 aa6.42□□□□□ -1.38
SMG1-205ENST00000561947 SDIM1Q6ZPB5 146 aa6.42□□□□□ -1.38
SMG1-205ENST00000561947 B9D2Q9BPU9 175 aa6.42□□□□□ -1.38
SMG1-205ENST00000561947 SMCR5Q8TEV8 140 aa6.41□□□□□ -1.38
SMG1-205ENST00000561947 TRBV7-6A0A0J9YX20 115 aa6.41□□□□□ -1.38
SMG1-205ENST00000561947 JMJD7-PLA2G4BH0Y9G9 81 aa6.41□□□□□ -1.38
SMG1-205ENST00000561947 COX7BP24311 80 aa6.4□□□□□ -1.38
SMG1-205ENST00000561947 A0A1B0GV72 72 aa6.4□□□□□ -1.39
SMG1-205ENST00000561947 ELOF1P60002 83 aaKnown RBP6.4□□□□□ -1.39
SMG1-205ENST00000561947 LINC00643Q86TS7 51 aa6.4□□□□□ -1.39
SMG1-205ENST00000561947 TRBV7-7A0A0K0K1E9 115 aa6.39□□□□□ -1.39
SMG1-205ENST00000561947 APLNQ9ULZ1 77 aa6.39□□□□□ -1.39
SMG1-205ENST00000561947 SERTAD4-AS1Q5TG53 156 aa6.38□□□□□ -1.39
SMG1-205ENST00000561947 Q6ZQY7 126 aa6.38□□□□□ -1.39
SMG1-205ENST00000561947 NKAPP1Q8N9T2 125 aa6.38□□□□□ -1.39
SMG1-205ENST00000561947 PLA2G2DQ9UNK4 145 aa6.38□□□□□ -1.39
SMG1-205ENST00000561947 H3BQ85 93 aa6.37□□□□□ -1.39
SMG1-205ENST00000561947 CCKP06307 115 aa6.37□□□□□ -1.39
SMG1-205ENST00000561947 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.37□□□□□ -1.39
SMG1-205ENST00000561947 UBE2DNLQ8IWF7 75 aa6.37□□□□□ -1.39
SMG1-205ENST00000561947 KRTAP1-5Q9BYS1 174 aa6.37□□□□□ -1.39
SMG1-205ENST00000561947 C7orf33Q8WU49 177 aa6.36□□□□□ -1.39
SMG1-205ENST00000561947 COL7A1Q02388 2944 aa6.36□□□□□ -1.39
SMG1-205ENST00000561947 LINC00528Q8N1L1 170 aa6.36□□□□□ -1.39
SMG1-205ENST00000561947 LYSTQ99698 3801 aa6.36□□□□□ -1.39
SMG1-205ENST00000561947 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
SMG1-205ENST00000561947 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
SMG1-205ENST00000561947 KCNQ1DNQ9H478 68 aa6.35□□□□□ -1.39
SMG1-205ENST00000561947 LINC00846Q9NV44 126 aa6.35□□□□□ -1.39
SMG1-205ENST00000561947 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
SMG1-205ENST00000561947 LAMTOR3Q9UHA4 124 aa6.35□□□□□ -1.39
SMG1-205ENST00000561947 LOC107984640A0A0U1RRK4 108 aa6.34□□□□□ -1.39
SMG1-205ENST00000561947 NDUFV3P56181 108 aaKnown RBP6.34□□□□□ -1.39
SMG1-205ENST00000561947 PLECQ15149 4684 aaKnown RBP6.34□□□□□ -1.39
SMG1-205ENST00000561947 GHRHP01286 108 aa6.34□□□□□ -1.39
SMG1-205ENST00000561947 RBM3P98179 157 aaKnown RBP6.34□□□□□ -1.39
SMG1-205ENST00000561947 ANAPC13Q9BS18 74 aa6.34□□□□□ -1.39
SMG1-205ENST00000561947 STAB2Q8WWQ8 2551 aa6.34□□□□□ -1.4
SMG1-205ENST00000561947 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms