RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ARL17AQ8IVW1 177 aa5.98□□□□□ -1.45
RABGGTA-221ENST00000561055 IGKV2D-26A0A0A0MRZ7 120 aa5.97□□□□□ -1.45
RABGGTA-221ENST00000561055 M0QXV9 152 aa5.97□□□□□ -1.45
RABGGTA-221ENST00000561055 SMIM13P0DJ93 91 aa5.97□□□□□ -1.45
RABGGTA-221ENST00000561055 C22orf24Q9Y442 160 aa5.97□□□□□ -1.45
RABGGTA-221ENST00000561055 PKHD1L1Q86WI1 4243 aa5.97□□□□□ -1.45
RABGGTA-221ENST00000561055 INAFM2P0DMQ5 153 aa5.96□□□□□ -1.46
RABGGTA-221ENST00000561055 PRR3P79522 188 aaKnown RBP5.96□□□□□ -1.46
RABGGTA-221ENST00000561055 LBHQ53QV2 105 aaPredicted RBP5.96□□□□□ -1.46
RABGGTA-221ENST00000561055 MEIG1Q5JSS6 88 aa5.96□□□□□ -1.46
RABGGTA-221ENST00000561055 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 A0A0J9YXY3 114 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 TIMM17BO60830 172 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 VPREB1P12018 145 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 RPL24P83731 157 aaKnown RBP5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 ANKRD39Q53RE8 183 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 MRPL55Q7Z7F7 128 aaKnown RBP5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 KRTAP11-1Q8IUC1 163 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 MIR7-3HGQ8N6C7 128 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 PSORS1C2Q9UIG4 136 aa5.95□□□□□ -1.46
RABGGTA-221ENST00000561055 FLG2Q5D862 2391 aaPredicted RBP5.94□□□□□ -1.46
RABGGTA-221ENST00000561055 SRSF9Q13242 221 aaKnown RBP eCLIP5.94□□□□□ -1.46
RABGGTA-221ENST00000561055 ATOH7Q8N100 152 aa5.94□□□□□ -1.46
RABGGTA-221ENST00000561055 A0A0U1RRA0 63 aa5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 ZNF815PA8K554 130 aa5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 HNRNPA3P51991 378 aaKnown RBP5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 Q8NDZ9 215 aa5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 LINC00167Q96N53 147 aa5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 LITAFQ99732 161 aa5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 MYCBP2O75592 4640 aa5.93□□□□□ -1.46
RABGGTA-221ENST00000561055 UBE2BP63146 152 aa5.92□□□□□ -1.46
RABGGTA-221ENST00000561055 NKAPP1Q8N9T2 125 aa5.92□□□□□ -1.46
RABGGTA-221ENST00000561055 TTTY13Q9BZ97 58 aa5.92□□□□□ -1.46
RABGGTA-221ENST00000561055 DMBT1Q9UGM3 2413 aaPredicted RBP5.91□□□□□ -1.46
RABGGTA-221ENST00000561055 IGLV1-50A0A075B6I6 118 aa5.91□□□□□ -1.46
RABGGTA-221ENST00000561055 NDUFC2O95298 119 aa5.91□□□□□ -1.46
RABGGTA-221ENST00000561055 SCGB1D1O95968 90 aa5.91□□□□□ -1.46
RABGGTA-221ENST00000561055 ADAMTSL4-AS1Q5T5F5 129 aa5.91□□□□□ -1.46
RABGGTA-221ENST00000561055 SPINK6Q6UWN8 80 aa5.91□□□□□ -1.46
RABGGTA-221ENST00000561055 HSBP1L1C9JCN9 74 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 M0R378 163 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 IGLV7-43P04211 117 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 JOSD1Q15040 202 aaPredicted RBP5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 C1orf137Q5JT78 98 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 PCP2Q8IVA1 136 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 BOD1L2Q8IYS8 172 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 DAND5Q8N907 189 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 PPDPFQ9H3Y8 114 aa5.9□□□□□ -1.46
RABGGTA-221ENST00000561055 TRBV10-2A0A0K0K1G8 114 aa5.89□□□□□ -1.47
RABGGTA-221ENST00000561055 SOSTDC1Q6X4U4 206 aa5.89□□□□□ -1.47
RABGGTA-221ENST00000561055 SPANXDQ9BXN6 97 aa5.89□□□□□ -1.47
RABGGTA-221ENST00000561055 SPANXCQ9NY87 97 aa5.89□□□□□ -1.47
RABGGTA-221ENST00000561055 RPL37AP8A6NKH3 93 aa5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 TMEM238C9JI98 176 aa5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 EIF4EBP3O60516 100 aaPredicted RBP5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 OXTP01178 125 aa5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 Q6ZVH6 145 aa5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 LINC00308Q8TCZ7 52 aa5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 MIEN1Q9BRT3 115 aa5.88□□□□□ -1.47
RABGGTA-221ENST00000561055 GAGE10A6NGK3 116 aa5.87□□□□□ -1.47
RABGGTA-221ENST00000561055 BCE1O60756 84 aa5.87□□□□□ -1.47
RABGGTA-221ENST00000561055 SCGB1D4Q6XE38 83 aa5.87□□□□□ -1.47
RABGGTA-221ENST00000561055 SPANXB1Q9NS25 103 aaPredicted RBP5.87□□□□□ -1.47
RABGGTA-221ENST00000561055 TMA7Q9Y2S6 64 aaKnown RBP5.87□□□□□ -1.47
RABGGTA-221ENST00000561055 IGKV2-28A0A075B6P5 120 aa5.86□□□□□ -1.47
RABGGTA-221ENST00000561055 DLEU1O43261 78 aa5.86□□□□□ -1.47
RABGGTA-221ENST00000561055 IGKV2D-28P01615 120 aa5.86□□□□□ -1.47
RABGGTA-221ENST00000561055 IFITM1P13164 125 aa5.86□□□□□ -1.47
RABGGTA-221ENST00000561055 KCNQ1DNQ9H478 68 aa5.86□□□□□ -1.47
RABGGTA-221ENST00000561055 ZNF861PO60384 105 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 COX8AP10176 69 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 SPRR1AP35321 89 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 PYY3Q5JQD4 70 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 REG3GQ6UW15 175 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 COPS9Q8WXC6 57 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 DIRC1Q969H9 104 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 TMEM126AQ9H061 195 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
RABGGTA-221ENST00000561055 H0Y9J4 135 aa5.84□□□□□ -1.47
RABGGTA-221ENST00000561055 PRYO14603 147 aa5.84□□□□□ -1.47
RABGGTA-221ENST00000561055 NCR3O14931 201 aa5.84□□□□□ -1.47
RABGGTA-221ENST00000561055 IGLV6-57P01721 117 aa5.84□□□□□ -1.47
RABGGTA-221ENST00000561055 RPL28P46779 137 aaKnown RBP5.84□□□□□ -1.47
RABGGTA-221ENST00000561055 TRBV10-3A0A0K0K1G6 114 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 KRTAP4-16G5E9R7 235 aaPredicted RBP5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 NPC2P61916 151 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 LINC00518Q8N0U6 118 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 LINC01600Q96MT4 127 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 VAMP8Q9BV40 100 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 LRP1Q07954 4544 aaKnown RBP5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
RABGGTA-221ENST00000561055 DDTP30046 118 aa5.82□□□□□ -1.48
RABGGTA-221ENST00000561055 SPATA45Q537H7 98 aa5.82□□□□□ -1.48
RABGGTA-221ENST00000561055 PAM16Q9Y3D7 125 aa5.82□□□□□ -1.48
RABGGTA-221ENST00000561055 S100A12P80511 92 aa5.81□□□□□ -1.48
RABGGTA-221ENST00000561055 MUSTN1Q8IVN3 82 aa5.81□□□□□ -1.48
RABGGTA-221ENST00000561055 HIGD1BQ9P298 99 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms