RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 Q6ZRP5 223 aa4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 NDUFA12Q9UI09 145 aa4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 RYR1P21817 5038 aa4.49□□□□□ -1.69
CTDSPL2-210ENST00000560834 LOC105371267A0A1B0GV96 52 aa4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 NDUFC2-KCTD14E9PQ53 114 aa4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 LGALS3P17931 250 aaKnown RBP4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 NMUP48645 174 aa4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 RPL18AQ02543 176 aaKnown RBP4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 ERG28Q9UKR5 140 aa4.48□□□□□ -1.69
CTDSPL2-210ENST00000560834 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
CTDSPL2-210ENST00000560834 HERV-K104P63124 156 aa4.47□□□□□ -1.69
CTDSPL2-210ENST00000560834 HAMPP81172 84 aa4.47□□□□□ -1.69
CTDSPL2-210ENST00000560834 PCP2Q8IVA1 136 aa4.47□□□□□ -1.69
CTDSPL2-210ENST00000560834 TP73-AS1Q9UF72 201 aa4.47□□□□□ -1.69
CTDSPL2-210ENST00000560834 PKIGQ9Y2B9 76 aa4.47□□□□□ -1.69
CTDSPL2-210ENST00000560834 IGKV2-24A0A0C4DH68 120 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 ZNF815PA8K554 130 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 HSBP1L1C9JCN9 74 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 SMIM13P0DJ93 91 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 GAGE2BQ13066 116 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 C9orf129Q5T035 196 aaKnown RBP4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 SCXQ7RTU7 201 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 VAMP8Q9BV40 100 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 PAM16Q9Y3D7 125 aa4.46□□□□□ -1.7
CTDSPL2-210ENST00000560834 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 PFN2P35080 140 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 COX17Q14061 63 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 GAGE2EQ4V326 116 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 SPATA45Q537H7 98 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 MEIG1Q5JSS6 88 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 KRTAP7-1Q8IUC3 87 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 LITAFQ99732 161 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 GAGE2DQ9UEU5 116 aa4.45□□□□□ -1.7
CTDSPL2-210ENST00000560834 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 A0A087WYN8 130 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 A0A0U1RRA0 63 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 EPM2AB3EWF7 344 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 SMIM6P0DI80 62 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 COX8AP10176 69 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 XGP55808 180 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 MIR7-3HGQ8N6C7 128 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 Q8NDZ9 215 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 CIRBP-AS1Q8TBR5 109 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 SND1-IT1Q9HBX3 110 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 XAGE1AQ9HD64 81 aa4.44□□□□□ -1.7
CTDSPL2-210ENST00000560834 A0A1W2PNN7 141 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 PRYO14603 147 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 TIMM17BO60830 172 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 LINC00158P58513 81 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 ADAMTSL4-AS1Q5T5F5 129 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 SERTAD4-AS1Q5TG53 156 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 BOD1L2Q8IYS8 172 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 DAND5Q8N907 189 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 PLAC8Q9NZF1 115 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 VPS13BQ7Z7G8 4022 aa4.43□□□□□ -1.7
CTDSPL2-210ENST00000560834 HERC2O95714 4834 aa4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 FAT1Q14517 4588 aa4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 SOSTDC1Q6X4U4 206 aa4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 SPANXDQ9BXN6 97 aa4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 SPANXCQ9NY87 97 aa4.42□□□□□ -1.7
CTDSPL2-210ENST00000560834 PKHD1L1Q86WI1 4243 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 IGLV5-37A0A075B6J1 123 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 LOC107984156A0A0G2JMH3 177 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 TMEM238C9JI98 176 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 DLEU1O43261 78 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 VPREB1P12018 145 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 SCGB1D4Q6XE38 83 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 C2orf91Q6ZV80 131 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 ARL17AQ8IVW1 177 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 C14orf144Q96I85 54 aa4.41□□□□□ -1.7
CTDSPL2-210ENST00000560834 M0QXV9 152 aa4.4□□□□□ -1.71
CTDSPL2-210ENST00000560834 NPC2P61916 151 aa4.4□□□□□ -1.71
CTDSPL2-210ENST00000560834 SPANXB1Q9NS25 103 aaPredicted RBP4.4□□□□□ -1.71
CTDSPL2-210ENST00000560834 SLC25A34Q6PIV7 304 aa4.39□□□□□ -1.71
CTDSPL2-210ENST00000560834 PHF5AQ7RTV0 110 aaKnown RBP4.39□□□□□ -1.71
CTDSPL2-210ENST00000560834 KRTAP11-1Q8IUC1 163 aa4.39□□□□□ -1.71
CTDSPL2-210ENST00000560834 LINC00308Q8TCZ7 52 aa4.39□□□□□ -1.71
CTDSPL2-210ENST00000560834 NCR3O14931 201 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 S100A12P80511 92 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 Q6ZVH6 145 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 C12orf57Q99622 126 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 PPDPFQ9H3Y8 114 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 HIGD1BQ9P298 99 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 C22orf24Q9Y442 160 aa4.38□□□□□ -1.71
CTDSPL2-210ENST00000560834 NDUFC2O95298 119 aa4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 SMR3BP02814 79 aaPredicted RBP4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 MRPL55Q7Z7F7 128 aaKnown RBP4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 C7orf33Q8WU49 177 aa4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 DPH3Q96FX2 82 aa4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 MIEN1Q9BRT3 115 aa4.37□□□□□ -1.71
CTDSPL2-210ENST00000560834 IGKV2-28A0A075B6P5 120 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms