RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 ATOH7Q8N100 152 aa9.65□□□□□ -0.86
LYSMD2-204ENST00000560491 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
LYSMD2-204ENST00000560491 C5orf52A6NGY3 159 aa9.64□□□□□ -0.87
LYSMD2-204ENST00000560491 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
LYSMD2-204ENST00000560491 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
LYSMD2-204ENST00000560491 LINC00158P58513 81 aa9.64□□□□□ -0.87
LYSMD2-204ENST00000560491 HERV-K104P63124 156 aa9.64□□□□□ -0.87
LYSMD2-204ENST00000560491 PRR3P79522 188 aaKnown RBP9.63□□□□□ -0.87
LYSMD2-204ENST00000560491 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
LYSMD2-204ENST00000560491 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
LYSMD2-204ENST00000560491 IGKV2D-26A0A0A0MRZ7 120 aa9.61□□□□□ -0.87
LYSMD2-204ENST00000560491 NMUP48645 174 aa9.61□□□□□ -0.87
LYSMD2-204ENST00000560491 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
LYSMD2-204ENST00000560491 MIR7-3HGQ8N6C7 128 aa9.6□□□□□ -0.87
LYSMD2-204ENST00000560491 PLA2G2DQ9UNK4 145 aa9.6□□□□□ -0.87
LYSMD2-204ENST00000560491 UBE2BP63146 152 aa9.59□□□□□ -0.87
LYSMD2-204ENST00000560491 ANKRD39Q53RE8 183 aa9.59□□□□□ -0.87
LYSMD2-204ENST00000560491 Q8NDZ9 215 aa9.59□□□□□ -0.87
LYSMD2-204ENST00000560491 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
LYSMD2-204ENST00000560491 MRPL55Q7Z7F7 128 aaKnown RBP9.58□□□□□ -0.88
LYSMD2-204ENST00000560491 DAND5Q8N907 189 aa9.58□□□□□ -0.88
LYSMD2-204ENST00000560491 MYCBP2O75592 4640 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 A0A0J9YXY3 114 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 GAGE10A6NGK3 116 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 VPREB1P12018 145 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 TP73-AS1Q9UF72 201 aa9.57□□□□□ -0.88
LYSMD2-204ENST00000560491 AKR1D1P51857 326 aa9.56□□□□□ -0.88
LYSMD2-204ENST00000560491 LBHQ53QV2 105 aaPredicted RBP9.56□□□□□ -0.88
LYSMD2-204ENST00000560491 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
LYSMD2-204ENST00000560491 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
LYSMD2-204ENST00000560491 TMA7Q9Y2S6 64 aaKnown RBP9.56□□□□□ -0.88
LYSMD2-204ENST00000560491 FLG2Q5D862 2391 aaPredicted RBP9.56□□□□□ -0.88
LYSMD2-204ENST00000560491 ZNF815PA8K554 130 aa9.55□□□□□ -0.88
LYSMD2-204ENST00000560491 FAT3Q8TDW7 4589 aa9.54□□□□□ -0.88
LYSMD2-204ENST00000560491 RPL37AP8A6NKH3 93 aa9.54□□□□□ -0.88
LYSMD2-204ENST00000560491 RPL24P83731 157 aaKnown RBP9.54□□□□□ -0.88
LYSMD2-204ENST00000560491 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
LYSMD2-204ENST00000560491 ADAMTSL4-AS1Q5T5F5 129 aa9.53□□□□□ -0.88
LYSMD2-204ENST00000560491 BOD1L2Q8IYS8 172 aa9.53□□□□□ -0.88
LYSMD2-204ENST00000560491 LRP1Q07954 4544 aaKnown RBP9.52□□□□□ -0.88
LYSMD2-204ENST00000560491 NPC2P61916 151 aa9.51□□□□□ -0.89
LYSMD2-204ENST00000560491 PCP2Q8IVA1 136 aa9.51□□□□□ -0.89
LYSMD2-204ENST00000560491 LITAFQ99732 161 aa9.51□□□□□ -0.89
LYSMD2-204ENST00000560491 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
LYSMD2-204ENST00000560491 NCR3O14931 201 aa9.5□□□□□ -0.89
LYSMD2-204ENST00000560491 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
LYSMD2-204ENST00000560491 IGLV7-43P04211 117 aa9.5□□□□□ -0.89
LYSMD2-204ENST00000560491 EIF4EBP3O60516 100 aaPredicted RBP9.49□□□□□ -0.89
LYSMD2-204ENST00000560491 LORP23490 312 aaPredicted RBP9.49□□□□□ -0.89
LYSMD2-204ENST00000560491 SRSF9Q13242 221 aaKnown RBP eCLIP9.49□□□□□ -0.89
LYSMD2-204ENST00000560491 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
LYSMD2-204ENST00000560491 LOC107984156A0A0G2JMH3 177 aa9.48□□□□□ -0.89
LYSMD2-204ENST00000560491 HSBP1L1C9JCN9 74 aa9.48□□□□□ -0.89
LYSMD2-204ENST00000560491 TIMM17BO60830 172 aa9.48□□□□□ -0.89
LYSMD2-204ENST00000560491 SCGB1D4Q6XE38 83 aa9.48□□□□□ -0.89
LYSMD2-204ENST00000560491 ARL17AQ8IVW1 177 aa9.48□□□□□ -0.89
LYSMD2-204ENST00000560491 MIEN1Q9BRT3 115 aa9.48□□□□□ -0.89
LYSMD2-204ENST00000560491 IGLV1-50A0A075B6I6 118 aa9.47□□□□□ -0.89
LYSMD2-204ENST00000560491 M0R378 163 aa9.47□□□□□ -0.89
LYSMD2-204ENST00000560491 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
LYSMD2-204ENST00000560491 SPINK6Q6UWN8 80 aa9.47□□□□□ -0.89
LYSMD2-204ENST00000560491 TMEM238C9JI98 176 aa9.45□□□□□ -0.9
LYSMD2-204ENST00000560491 BCE1O60756 84 aa9.44□□□□□ -0.9
LYSMD2-204ENST00000560491 LINC00308Q8TCZ7 52 aa9.44□□□□□ -0.9
LYSMD2-204ENST00000560491 LOC100996750A0A140TA64 210 aa9.43□□□□□ -0.9
LYSMD2-204ENST00000560491 JOSD1Q15040 202 aaPredicted RBP9.43□□□□□ -0.9
LYSMD2-204ENST00000560491 KRTAP4-6Q9BYQ5 205 aa9.43□□□□□ -0.9
LYSMD2-204ENST00000560491 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 KRTAP29-1A8MX34 341 aaPredicted RBP9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 NDUFC2O95298 119 aa9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 REG3GQ6UW15 175 aa9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 SPANXDQ9BXN6 97 aa9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 SPANXB1Q9NS25 103 aaPredicted RBP9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 SPANXCQ9NY87 97 aa9.42□□□□□ -0.9
LYSMD2-204ENST00000560491 ZNF861PO60384 105 aa9.41□□□□□ -0.9
LYSMD2-204ENST00000560491 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
LYSMD2-204ENST00000560491 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
LYSMD2-204ENST00000560491 H0Y9J4 135 aa9.4□□□□□ -0.9
LYSMD2-204ENST00000560491 OXTP01178 125 aa9.4□□□□□ -0.9
LYSMD2-204ENST00000560491 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
LYSMD2-204ENST00000560491 PRYO14603 147 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 DDTP30046 118 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 UBE2AP49459 152 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 PRLHP81277 87 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 SPATA45Q537H7 98 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 FAM19A1Q7Z5A9 133 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 KRTAP13-1Q8IUC0 172 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 VAMP8Q9BV40 100 aa9.38□□□□□ -0.91
LYSMD2-204ENST00000560491 COX8AP10176 69 aa9.37□□□□□ -0.91
LYSMD2-204ENST00000560491 PYY3Q5JQD4 70 aa9.37□□□□□ -0.91
LYSMD2-204ENST00000560491 TNXBP22105 4242 aa9.36□□□□□ -0.91
LYSMD2-204ENST00000560491 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
LYSMD2-204ENST00000560491 KCNQ1DNQ9H478 68 aa9.36□□□□□ -0.91
LYSMD2-204ENST00000560491 IGLV6-57P01721 117 aa9.35□□□□□ -0.91
LYSMD2-204ENST00000560491 Q6ZVH6 145 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms