RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 HIST1H2BBP33778 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BDP58876 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HERVK_113P61574 105 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BCP62807 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST2H2BEQ16778 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 MEIG1Q5JSS6 88 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 C1orf137Q5JT78 98 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BHQ93079 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BNQ99877 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 HIST1H2BMQ99879 126 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 PMCHL2Q9BQD1 86 aa5.01□□□□□ -1.61
LRRC28-219ENST00000560483 A0A0U1RRA0 63 aa5□□□□□ -1.61
LRRC28-219ENST00000560483 A4D1N5 150 aa5□□□□□ -1.61
LRRC28-219ENST00000560483 NUPR1O60356 82 aa5□□□□□ -1.61
LRRC28-219ENST00000560483 LINC00158P58513 81 aa5□□□□□ -1.61
LRRC28-219ENST00000560483 PRR3P79522 188 aaKnown RBP5□□□□□ -1.61
LRRC28-219ENST00000560483 NKAPP1Q8N9T2 125 aa5□□□□□ -1.61
LRRC28-219ENST00000560483 DPM2O94777 84 aa4.99□□□□□ -1.61
LRRC28-219ENST00000560483 PLNP26678 52 aa4.99□□□□□ -1.61
LRRC28-219ENST00000560483 C9orf129Q5T035 196 aaKnown RBP4.99□□□□□ -1.61
LRRC28-219ENST00000560483 SFTA2Q6UW10 78 aa4.99□□□□□ -1.61
LRRC28-219ENST00000560483 ERG28Q9UKR5 140 aa4.99□□□□□ -1.61
LRRC28-219ENST00000560483 IGLV5-39A0A0G2JS06 123 aa4.98□□□□□ -1.61
LRRC28-219ENST00000560483 TMEM223A0PJW6 202 aa4.98□□□□□ -1.61
LRRC28-219ENST00000560483 GAGE10A6NGK3 116 aa4.98□□□□□ -1.61
LRRC28-219ENST00000560483 IGKCP01834 107 aa4.98□□□□□ -1.61
LRRC28-219ENST00000560483 LBHQ53QV2 105 aaPredicted RBP4.98□□□□□ -1.61
LRRC28-219ENST00000560483 PSORS1C2Q9UIG4 136 aa4.98□□□□□ -1.61
LRRC28-219ENST00000560483 MYMXA0A1B0GTQ4 84 aa4.97□□□□□ -1.61
LRRC28-219ENST00000560483 LGALS3P17931 250 aaKnown RBP4.97□□□□□ -1.61
LRRC28-219ENST00000560483 HNRNPA3P51991 378 aaKnown RBP4.97□□□□□ -1.61
LRRC28-219ENST00000560483 KRTDAPP60985 99 aa4.97□□□□□ -1.61
LRRC28-219ENST00000560483 SERTAD4-AS1Q5TG53 156 aa4.97□□□□□ -1.61
LRRC28-219ENST00000560483 C22orf24Q9Y442 160 aa4.97□□□□□ -1.61
LRRC28-219ENST00000560483 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
LRRC28-219ENST00000560483 RPL37AP8A6NKH3 93 aa4.96□□□□□ -1.62
LRRC28-219ENST00000560483 S100A2P29034 98 aa4.96□□□□□ -1.62
LRRC28-219ENST00000560483 MRPL55Q7Z7F7 128 aaKnown RBP4.96□□□□□ -1.62
LRRC28-219ENST00000560483 PLEKHB2Q96CS7 222 aa4.96□□□□□ -1.62
LRRC28-219ENST00000560483 NDUFA12Q9UI09 145 aa4.96□□□□□ -1.62
LRRC28-219ENST00000560483 C20orf202A1L168 122 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 SYS1-DBNDD2H3BUS1 97 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 LEPROTO15243 131 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 S100A6P06703 90 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 SMIM13P0DJ93 91 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 KRTAP10-4P60372 401 aaPredicted RBP4.95□□□□□ -1.62
LRRC28-219ENST00000560483 RPL24P83731 157 aaKnown RBP4.95□□□□□ -1.62
LRRC28-219ENST00000560483 COX17Q14061 63 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 REG3GQ6UW15 175 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 SPINK6Q6UWN8 80 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 SND1-IT1Q9HBX3 110 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 PKHD1L1Q86WI1 4243 aa4.95□□□□□ -1.62
LRRC28-219ENST00000560483 LINC00587B1AMM8 73 aa4.94□□□□□ -1.62
LRRC28-219ENST00000560483 J3QQQ9 107 aa4.94□□□□□ -1.62
LRRC28-219ENST00000560483 OXTP01178 125 aa4.94□□□□□ -1.62
LRRC28-219ENST00000560483 HERV-K104P63124 156 aa4.94□□□□□ -1.62
LRRC28-219ENST00000560483 MIEN1Q9BRT3 115 aa4.94□□□□□ -1.62
LRRC28-219ENST00000560483 DMBT1Q9UGM3 2413 aaPredicted RBP4.94□□□□□ -1.62
LRRC28-219ENST00000560483 IGKV2-28A0A075B6P5 120 aa4.93□□□□□ -1.62
LRRC28-219ENST00000560483 KRTAP29-1A8MX34 341 aaPredicted RBP4.93□□□□□ -1.62
LRRC28-219ENST00000560483 IGKV2D-28P01615 120 aa4.93□□□□□ -1.62
LRRC28-219ENST00000560483 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
LRRC28-219ENST00000560483 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
LRRC28-219ENST00000560483 C3orf79P0CE67 100 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 UBE2AP49459 152 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 KRTAP7-1Q8IUC3 87 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 BOD1L2Q8IYS8 172 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 MIR7-3HGQ8N6C7 128 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 DIRC1Q969H9 104 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 TP73-AS1Q9UF72 201 aa4.92□□□□□ -1.62
LRRC28-219ENST00000560483 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 NCR3O14931 201 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 NMUP48645 174 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 TSPEAR-AS2P59090 65 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 NPC2P61916 151 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 S100A12P80511 92 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 KRTAP11-1Q8IUC1 163 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 DAND5Q8N907 189 aa4.91□□□□□ -1.62
LRRC28-219ENST00000560483 LRP1Q07954 4544 aaKnown RBP4.91□□□□□ -1.62
LRRC28-219ENST00000560483 COA6Q5JTJ3 125 aaKnown RBP4.9□□□□□ -1.63
LRRC28-219ENST00000560483 LINC01545Q5VT33 79 aa4.9□□□□□ -1.63
LRRC28-219ENST00000560483 FAM19A1Q7Z5A9 133 aa4.9□□□□□ -1.63
LRRC28-219ENST00000560483 ATOH7Q8N100 152 aa4.9□□□□□ -1.63
LRRC28-219ENST00000560483 HERC1Q15751 4861 aa4.89□□□□□ -1.63
LRRC28-219ENST00000560483 ZNF815PA8K554 130 aa4.89□□□□□ -1.63
LRRC28-219ENST00000560483 E9PLD3 99 aa4.89□□□□□ -1.63
LRRC28-219ENST00000560483 BCE1O60756 84 aa4.89□□□□□ -1.63
LRRC28-219ENST00000560483 VPREB1P12018 145 aa4.89□□□□□ -1.63
LRRC28-219ENST00000560483 RPL28P46779 137 aaKnown RBP4.89□□□□□ -1.63
LRRC28-219ENST00000560483 SCGB1D4Q6XE38 83 aa4.89□□□□□ -1.63
LRRC28-219ENST00000560483 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
LRRC28-219ENST00000560483 HSBP1L1C9JCN9 74 aa4.88□□□□□ -1.63
LRRC28-219ENST00000560483 H0Y9J4 135 aa4.88□□□□□ -1.63
LRRC28-219ENST00000560483 M0R378 163 aa4.88□□□□□ -1.63
LRRC28-219ENST00000560483 ZNF861PO60384 105 aa4.88□□□□□ -1.63
LRRC28-219ENST00000560483 AKR1D1P51857 326 aa4.88□□□□□ -1.63
LRRC28-219ENST00000560483 A0A0J9YXY3 114 aa4.87□□□□□ -1.63
LRRC28-219ENST00000560483 TMEM238C9JI98 176 aa4.87□□□□□ -1.63
LRRC28-219ENST00000560483 SNRPEP62304 92 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms