RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 FAM218AQ96MZ4 157 aa6.55□□□□□ -1.36
RTF1-206ENST00000560447 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
RTF1-206ENST00000560447 Q6ZTC4 211 aa6.54□□□□□ -1.36
RTF1-206ENST00000560447 C11orf45Q8TAV5 145 aa6.54□□□□□ -1.36
RTF1-206ENST00000560447 CMYA5Q8N3K9 4069 aa6.53□□□□□ -1.36
RTF1-206ENST00000560447 A0A1B0GV72 72 aa6.53□□□□□ -1.36
RTF1-206ENST00000560447 CYSRT1A8MQ03 144 aa6.53□□□□□ -1.36
RTF1-206ENST00000560447 OBSCN-AS1Q96MR7 158 aa6.53□□□□□ -1.36
RTF1-206ENST00000560447 RETNQ9HD89 108 aa6.53□□□□□ -1.36
RTF1-206ENST00000560447 F8P00451 2351 aa6.53□□□□□ -1.36
RTF1-206ENST00000560447 DEFB131BA0A096LNP1 70 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 TRAV10A0A0B4J240 114 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 H3BS24 57 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 NANOS2P60321 138 aaKnown RBP6.52□□□□□ -1.37
RTF1-206ENST00000560447 KRTAP26-1Q6PEX3 210 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 ORMDL1Q9P0S3 153 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 NBEAL2Q6ZNJ1 2754 aa6.52□□□□□ -1.37
RTF1-206ENST00000560447 A0A087WYN8 130 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 ZNF561-AS1K7EIQ3 104 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 LECT2O14960 151 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 UNQ6190/PRO20217Q6UXQ8 127 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 C22orf24Q9Y442 160 aa6.51□□□□□ -1.37
RTF1-206ENST00000560447 JMJD7-PLA2G4BH0Y9G9 81 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 IGLV6-57P01721 117 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 DNAH10OSP0CZ25 163 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 ESRGQ1W209 222 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 S100A7L2Q5SY68 101 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 TM2D3Q9BRN9 247 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 C1orf43Q9BWL3 253 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
RTF1-206ENST00000560447 TRBV7-6A0A0J9YX20 115 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 TRBV7-7A0A0K0K1E9 115 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 TMEM256-PLSCR3K7ERE1 68 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 C10orf25Q5T742 122 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 LINC00643Q86TS7 51 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 Q8N814 137 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 Q9HAA7 133 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
RTF1-206ENST00000560447 C9orf116Q5BN46 136 aaPredicted RBP6.48□□□□□ -1.37
RTF1-206ENST00000560447 C6orf223Q8N319 242 aa6.48□□□□□ -1.37
RTF1-206ENST00000560447 CAMK2N2Q96S95 79 aa6.48□□□□□ -1.37
RTF1-206ENST00000560447 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
RTF1-206ENST00000560447 LINC00575Q6W349 94 aa6.47□□□□□ -1.37
RTF1-206ENST00000560447 C15orf56Q8N910 161 aa6.47□□□□□ -1.37
RTF1-206ENST00000560447 RMI2Q96E14 147 aa6.47□□□□□ -1.37
RTF1-206ENST00000560447 TRRAPQ9Y4A5 3859 aa6.46□□□□□ -1.37
RTF1-206ENST00000560447 NDUFC2-KCTD14E9PQ53 114 aa6.46□□□□□ -1.38
RTF1-206ENST00000560447 C6orf99Q4VX62 202 aa6.46□□□□□ -1.38
RTF1-206ENST00000560447 M0R378 163 aa6.45□□□□□ -1.38
RTF1-206ENST00000560447 NCR3O14931 201 aa6.45□□□□□ -1.38
RTF1-206ENST00000560447 UPK3BQ9BT76 320 aa6.45□□□□□ -1.38
RTF1-206ENST00000560447 TRAV23DV6A0A075B6W5 121 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 PRR3P79522 188 aaKnown RBP6.44□□□□□ -1.38
RTF1-206ENST00000560447 TTC32Q5I0X7 151 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 Q8NDZ9 215 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 PLA2G2DQ9UNK4 145 aa6.44□□□□□ -1.38
RTF1-206ENST00000560447 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
RTF1-206ENST00000560447 K7EIL1 84 aa6.43□□□□□ -1.38
RTF1-206ENST00000560447 VPREB1P12018 145 aa6.43□□□□□ -1.38
RTF1-206ENST00000560447 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
RTF1-206ENST00000560447 SYCNQ0VAF6 134 aa6.43□□□□□ -1.38
RTF1-206ENST00000560447 GAGE2AQ6NT46 116 aa6.43□□□□□ -1.38
RTF1-206ENST00000560447 Q6ZRU5 148 aa6.43□□□□□ -1.38
RTF1-206ENST00000560447 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
RTF1-206ENST00000560447 CCKP06307 115 aa6.42□□□□□ -1.38
RTF1-206ENST00000560447 PDE6GP18545 87 aa6.42□□□□□ -1.38
RTF1-206ENST00000560447 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
RTF1-206ENST00000560447 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.42□□□□□ -1.38
RTF1-206ENST00000560447 ANAPC13Q9BS18 74 aa6.42□□□□□ -1.38
RTF1-206ENST00000560447 MAST4O15021 2626 aa6.41□□□□□ -1.38
RTF1-206ENST00000560447 TRBV10-3A0A0K0K1G6 114 aa6.41□□□□□ -1.38
RTF1-206ENST00000560447 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
RTF1-206ENST00000560447 ELOF1P60002 83 aaKnown RBP6.41□□□□□ -1.38
RTF1-206ENST00000560447 LINC00526Q96FQ7 95 aa6.41□□□□□ -1.38
RTF1-206ENST00000560447 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.38
RTF1-206ENST00000560447 SLPIP03973 132 aa6.4□□□□□ -1.38
RTF1-206ENST00000560447 COX7BP24311 80 aa6.4□□□□□ -1.38
RTF1-206ENST00000560447 Q6JHZ5 121 aa6.4□□□□□ -1.38
RTF1-206ENST00000560447 MRAPQ8TCY5 172 aa6.4□□□□□ -1.38
RTF1-206ENST00000560447 C14orf132Q9NPU4 83 aa6.4□□□□□ -1.38
RTF1-206ENST00000560447 LINC00588Q9Y4M8 146 aa6.4□□□□□ -1.38
RTF1-206ENST00000560447 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
RTF1-206ENST00000560447 LOC110117498A0A087WWA1 95 aa6.39□□□□□ -1.39
RTF1-206ENST00000560447 ATP5EP2Q5VTU8 51 aa6.39□□□□□ -1.39
RTF1-206ENST00000560447 SMCR5Q8TEV8 140 aa6.39□□□□□ -1.39
RTF1-206ENST00000560447 XAGE1AQ9HD64 81 aa6.39□□□□□ -1.39
RTF1-206ENST00000560447 BAHCC1Q9P281 2608 aa6.39□□□□□ -1.39
RTF1-206ENST00000560447 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
RTF1-206ENST00000560447 ANK2Q01484 3957 aa6.38□□□□□ -1.39
RTF1-206ENST00000560447 HUWE1Q7Z6Z7 4374 aaKnown RBP6.38□□□□□ -1.39
RTF1-206ENST00000560447 RBM3P98179 157 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms