RNA–Protein interactions for RNA: ENST00000560213.1

LRRC28-217, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-217ENST00000560213 KRTAP10-4P60372 401 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-217ENST00000560213 UBE2BP63146 152 aa10.16□□□□□ -0.78
LRRC28-217ENST00000560213 LBHQ53QV2 105 aaPredicted RBP10.16□□□□□ -0.78
LRRC28-217ENST00000560213 MIR7-3HGQ8N6C7 128 aa10.16□□□□□ -0.78
LRRC28-217ENST00000560213 IGKV2D-26A0A0A0MRZ7 120 aa10.15□□□□□ -0.78
LRRC28-217ENST00000560213 SCGB1D1O95968 90 aa10.15□□□□□ -0.78
LRRC28-217ENST00000560213 NKAPP1Q8N9T2 125 aa10.15□□□□□ -0.78
LRRC28-217ENST00000560213 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
LRRC28-217ENST00000560213 RPL24P83731 157 aaKnown RBP10.14□□□□□ -0.79
LRRC28-217ENST00000560213 ANKRD39Q53RE8 183 aa10.14□□□□□ -0.79
LRRC28-217ENST00000560213 MRPL55Q7Z7F7 128 aaKnown RBP10.14□□□□□ -0.79
LRRC28-217ENST00000560213 TP73-AS1Q9UF72 201 aa10.14□□□□□ -0.79
LRRC28-217ENST00000560213 TMA7Q9Y2S6 64 aaKnown RBP10.14□□□□□ -0.79
LRRC28-217ENST00000560213 A0A0J9YXY3 114 aa10.13□□□□□ -0.79
LRRC28-217ENST00000560213 ZNF815PA8K554 130 aa10.13□□□□□ -0.79
LRRC28-217ENST00000560213 PSORS1C2Q9UIG4 136 aa10.13□□□□□ -0.79
LRRC28-217ENST00000560213 IGLV5-37A0A075B6J1 123 aa10.12□□□□□ -0.79
LRRC28-217ENST00000560213 HSBP1L1C9JCN9 74 aa10.12□□□□□ -0.79
LRRC28-217ENST00000560213 VPREB1P12018 145 aa10.11□□□□□ -0.79
LRRC28-217ENST00000560213 DAND5Q8N907 189 aa10.11□□□□□ -0.79
LRRC28-217ENST00000560213 TTTY13Q9BZ97 58 aa10.11□□□□□ -0.79
LRRC28-217ENST00000560213 C1orf137Q5JT78 98 aa10.1□□□□□ -0.79
LRRC28-217ENST00000560213 KRTAP11-1Q8IUC1 163 aa10.1□□□□□ -0.79
LRRC28-217ENST00000560213 BOD1L2Q8IYS8 172 aa10.1□□□□□ -0.79
LRRC28-217ENST00000560213 LINC00167Q96N53 147 aa10.1□□□□□ -0.79
LRRC28-217ENST00000560213 GAGE10A6NGK3 116 aa10.09□□□□□ -0.79
LRRC28-217ENST00000560213 SRRM2Q9UQ35 2752 aaKnown RBP10.09□□□□□ -0.79
LRRC28-217ENST00000560213 RPL37AP8A6NKH3 93 aa10.08□□□□□ -0.8
LRRC28-217ENST00000560213 HNRNPA3P51991 378 aaKnown RBP10.08□□□□□ -0.8
LRRC28-217ENST00000560213 ADAMTSL4-AS1Q5T5F5 129 aa10.08□□□□□ -0.8
LRRC28-217ENST00000560213 MIEN1Q9BRT3 115 aa10.08□□□□□ -0.8
LRRC28-217ENST00000560213 TIMM17BO60830 172 aa10.07□□□□□ -0.8
LRRC28-217ENST00000560213 SCGB1D4Q6XE38 83 aa10.07□□□□□ -0.8
LRRC28-217ENST00000560213 Q8NDZ9 215 aa10.07□□□□□ -0.8
LRRC28-217ENST00000560213 FAT1Q14517 4588 aa10.06□□□□□ -0.8
LRRC28-217ENST00000560213 PCP2Q8IVA1 136 aa10.06□□□□□ -0.8
LRRC28-217ENST00000560213 LOC107984156A0A0G2JMH3 177 aa10.05□□□□□ -0.8
LRRC28-217ENST00000560213 M0R378 163 aa10.05□□□□□ -0.8
LRRC28-217ENST00000560213 ARL17AQ8IVW1 177 aa10.05□□□□□ -0.8
LRRC28-217ENST00000560213 NPC2P61916 151 aa10.04□□□□□ -0.8
LRRC28-217ENST00000560213 LITAFQ99732 161 aa10.04□□□□□ -0.8
LRRC28-217ENST00000560213 VPS13BQ7Z7G8 4022 aa10.04□□□□□ -0.8
LRRC28-217ENST00000560213 IGKV2-28A0A075B6P5 120 aa10.03□□□□□ -0.8
LRRC28-217ENST00000560213 IGKV2D-28P01615 120 aa10.03□□□□□ -0.8
LRRC28-217ENST00000560213 IGLV7-43P04211 117 aa10.03□□□□□ -0.8
LRRC28-217ENST00000560213 JOSD1Q15040 202 aaPredicted RBP10.03□□□□□ -0.8
LRRC28-217ENST00000560213 SPINK6Q6UWN8 80 aa10.03□□□□□ -0.8
LRRC28-217ENST00000560213 IGLV1-50A0A075B6I6 118 aa10.02□□□□□ -0.81
LRRC28-217ENST00000560213 TMEM238C9JI98 176 aa10.02□□□□□ -0.81
LRRC28-217ENST00000560213 NCR3O14931 201 aa10.02□□□□□ -0.81
LRRC28-217ENST00000560213 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.81
LRRC28-217ENST00000560213 SOSTDC1Q6X4U4 206 aa10.01□□□□□ -0.81
LRRC28-217ENST00000560213 LINC00308Q8TCZ7 52 aa10.01□□□□□ -0.81
LRRC28-217ENST00000560213 NDUFC2O95298 119 aa10□□□□□ -0.81
LRRC28-217ENST00000560213 FLG2Q5D862 2391 aaPredicted RBP10□□□□□ -0.81
LRRC28-217ENST00000560213 EIF4EBP3O60516 100 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-217ENST00000560213 TRBV10-2A0A0K0K1G8 114 aa9.98□□□□□ -0.81
LRRC28-217ENST00000560213 BCE1O60756 84 aa9.98□□□□□ -0.81
LRRC28-217ENST00000560213 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
LRRC28-217ENST00000560213 SPANXDQ9BXN6 97 aa9.98□□□□□ -0.81
LRRC28-217ENST00000560213 SPANXB1Q9NS25 103 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-217ENST00000560213 SPANXCQ9NY87 97 aa9.98□□□□□ -0.81
LRRC28-217ENST00000560213 REG3GQ6UW15 175 aa9.97□□□□□ -0.81
LRRC28-217ENST00000560213 COPS9Q8WXC6 57 aa9.97□□□□□ -0.81
LRRC28-217ENST00000560213 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
LRRC28-217ENST00000560213 PAM16Q9Y3D7 125 aa9.97□□□□□ -0.81
LRRC28-217ENST00000560213 SPATA45Q537H7 98 aa9.96□□□□□ -0.82
LRRC28-217ENST00000560213 Q6ZVH6 145 aa9.96□□□□□ -0.82
LRRC28-217ENST00000560213 DIRC1Q969H9 104 aa9.96□□□□□ -0.82
LRRC28-217ENST00000560213 TMEM126AQ9H061 195 aa9.96□□□□□ -0.82
LRRC28-217ENST00000560213 ABCA13Q86UQ4 5058 aa9.96□□□□□ -0.82
LRRC28-217ENST00000560213 TRBV10-3A0A0K0K1G6 114 aa9.95□□□□□ -0.82
LRRC28-217ENST00000560213 ZNF861PO60384 105 aa9.95□□□□□ -0.82
LRRC28-217ENST00000560213 COX8AP10176 69 aa9.95□□□□□ -0.82
LRRC28-217ENST00000560213 IFITM1P13164 125 aa9.95□□□□□ -0.82
LRRC28-217ENST00000560213 S100A12P80511 92 aa9.95□□□□□ -0.82
LRRC28-217ENST00000560213 S100A7L2Q5SY68 101 aa9.95□□□□□ -0.82
LRRC28-217ENST00000560213 PRYO14603 147 aa9.94□□□□□ -0.82
LRRC28-217ENST00000560213 OXTP01178 125 aa9.94□□□□□ -0.82
LRRC28-217ENST00000560213 DDTP30046 118 aa9.94□□□□□ -0.82
LRRC28-217ENST00000560213 RPL28P46779 137 aaKnown RBP9.94□□□□□ -0.82
LRRC28-217ENST00000560213 UBE2AP49459 152 aa9.94□□□□□ -0.82
LRRC28-217ENST00000560213 PYY3Q5JQD4 70 aa9.94□□□□□ -0.82
LRRC28-217ENST00000560213 KRTAP29-1A8MX34 341 aaPredicted RBP9.93□□□□□ -0.82
LRRC28-217ENST00000560213 FAM19A1Q7Z5A9 133 aa9.93□□□□□ -0.82
LRRC28-217ENST00000560213 H0Y9J4 135 aa9.92□□□□□ -0.82
LRRC28-217ENST00000560213 MUSTN1Q8IVN3 82 aa9.92□□□□□ -0.82
LRRC28-217ENST00000560213 LINC00518Q8N0U6 118 aa9.92□□□□□ -0.82
LRRC28-217ENST00000560213 C14orf144Q96I85 54 aa9.92□□□□□ -0.82
LRRC28-217ENST00000560213 KCNQ1DNQ9H478 68 aa9.92□□□□□ -0.82
LRRC28-217ENST00000560213 J3QL48 77 aa9.91□□□□□ -0.82
LRRC28-217ENST00000560213 DLEU1O43261 78 aa9.91□□□□□ -0.82
LRRC28-217ENST00000560213 PPDPFQ9H3Y8 114 aa9.91□□□□□ -0.82
LRRC28-217ENST00000560213 PCLOQ9Y6V0 5065 aa9.91□□□□□ -0.82
LRRC28-217ENST00000560213 OR13C6PQ8NH95 151 aa9.9□□□□□ -0.82
LRRC28-217ENST00000560213 IGLV6-57P01721 117 aa9.89□□□□□ -0.83
LRRC28-217ENST00000560213 PRLHP81277 87 aa9.89□□□□□ -0.83
LRRC28-217ENST00000560213 SLC25A34Q6PIV7 304 aa9.88□□□□□ -0.83
LRRC28-217ENST00000560213 KRTAP13-1Q8IUC0 172 aa9.88□□□□□ -0.83
LRRC28-217ENST00000560213 CBY1Q9Y3M2 126 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms