RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 SDIM1Q6ZPB5 146 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 WFDC10BQ8IUB3 73 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 C2orf48Q96LS8 159 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 Q9HAA7 133 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 ORMDL1Q9P0S3 153 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 GAGE2DQ9UEU5 116 aa5.44□□□□□ -1.54
SMAD3-212ENST00000559937 TRBV7-7A0A0K0K1E9 115 aa5.43□□□□□ -1.54
SMAD3-212ENST00000559937 H3BQ85 93 aa5.43□□□□□ -1.54
SMAD3-212ENST00000559937 C9orf116Q5BN46 136 aaPredicted RBP5.43□□□□□ -1.54
SMAD3-212ENST00000559937 C10orf25Q5T742 122 aa5.43□□□□□ -1.54
SMAD3-212ENST00000559937 C6orf223Q8N319 242 aa5.43□□□□□ -1.54
SMAD3-212ENST00000559937 IMUPQ9GZP8 106 aa5.43□□□□□ -1.54
SMAD3-212ENST00000559937 DEFB131BA0A096LNP1 70 aa5.42□□□□□ -1.54
SMAD3-212ENST00000559937 S100A7L2Q5SY68 101 aa5.42□□□□□ -1.54
SMAD3-212ENST00000559937 LINC00643Q86TS7 51 aa5.42□□□□□ -1.54
SMAD3-212ENST00000559937 Q8N814 137 aa5.42□□□□□ -1.54
SMAD3-212ENST00000559937 C11orf45Q8TAV5 145 aa5.42□□□□□ -1.54
SMAD3-212ENST00000559937 C6orf48Q9UBA6 75 aa5.42□□□□□ -1.54
SMAD3-212ENST00000559937 PRKDCP78527 4128 aaKnown RBP5.41□□□□□ -1.54
SMAD3-212ENST00000559937 TRAV10A0A0B4J240 114 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 JMJD7-PLA2G4BH0Y9G9 81 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 ZNF561-AS1K7EIQ3 104 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 NCR3O14931 201 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 IGLV6-57P01721 117 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 ESRGQ1W209 222 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 CMYA5Q8N3K9 4069 aa5.41□□□□□ -1.54
SMAD3-212ENST00000559937 TMEM256-PLSCR3K7ERE1 68 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 DNAH10OSP0CZ25 163 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
SMAD3-212ENST00000559937 TTC32Q5I0X7 151 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 LINC00575Q6W349 94 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 C15orf56Q8N910 161 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 CAMK2N2Q96S95 79 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 C1orf43Q9BWL3 253 aa5.4□□□□□ -1.54
SMAD3-212ENST00000559937 TRBV7-6A0A0J9YX20 115 aa5.39□□□□□ -1.55
SMAD3-212ENST00000559937 C6orf99Q4VX62 202 aa5.39□□□□□ -1.55
SMAD3-212ENST00000559937 Q8NDZ9 215 aa5.39□□□□□ -1.55
SMAD3-212ENST00000559937 TM2D3Q9BRN9 247 aa5.39□□□□□ -1.55
SMAD3-212ENST00000559937 ANAPC13Q9BS18 74 aa5.39□□□□□ -1.55
SMAD3-212ENST00000559937 NDUFV3P56181 108 aaKnown RBP5.38□□□□□ -1.55
SMAD3-212ENST00000559937 GAGE2AQ6NT46 116 aa5.38□□□□□ -1.55
SMAD3-212ENST00000559937 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
SMAD3-212ENST00000559937 TRAV23DV6A0A075B6W5 121 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 hADV29S1A0JD25 119 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 NDUFC2-KCTD14E9PQ53 114 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 M0R378 163 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 GHRHP01286 108 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 SLPIP03973 132 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 VPREB1P12018 145 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 RPL18AQ02543 176 aaKnown RBP5.37□□□□□ -1.55
SMAD3-212ENST00000559937 Q6ZRU5 148 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 SMCR5Q8TEV8 140 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 DIRC1Q969H9 104 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
SMAD3-212ENST00000559937 TENM3Q9P273 2699 aa5.36□□□□□ -1.55
SMAD3-212ENST00000559937 CCKP06307 115 aa5.36□□□□□ -1.55
SMAD3-212ENST00000559937 HIGD2BQ4VC39 106 aa5.36□□□□□ -1.55
SMAD3-212ENST00000559937 Q6JHZ5 121 aa5.36□□□□□ -1.55
SMAD3-212ENST00000559937 RMI2Q96E14 147 aa5.36□□□□□ -1.55
SMAD3-212ENST00000559937 IGKV2D-24A0A075B6R9 120 aa5.35□□□□□ -1.55
SMAD3-212ENST00000559937 TRBV10-3A0A0K0K1G6 114 aa5.35□□□□□ -1.55
SMAD3-212ENST00000559937 NHLRC4P0CG21 123 aaPredicted RBP5.35□□□□□ -1.55
SMAD3-212ENST00000559937 COX7BP24311 80 aa5.35□□□□□ -1.55
SMAD3-212ENST00000559937 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
SMAD3-212ENST00000559937 C9orf129Q5T035 196 aaKnown RBP5.35□□□□□ -1.55
SMAD3-212ENST00000559937 K7EIL1 84 aa5.34□□□□□ -1.55
SMAD3-212ENST00000559937 ZNF73O43830 326 aaPredicted RBP5.34□□□□□ -1.55
SMAD3-212ENST00000559937 TLX1NBP0CAT3 122 aa5.34□□□□□ -1.55
SMAD3-212ENST00000559937 ELOF1P60002 83 aaKnown RBP5.34□□□□□ -1.55
SMAD3-212ENST00000559937 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.34□□□□□ -1.55
SMAD3-212ENST00000559937 UPK3BQ9BT76 320 aa5.34□□□□□ -1.55
SMAD3-212ENST00000559937 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
SMAD3-212ENST00000559937 PLA2G2DQ9UNK4 145 aa5.34□□□□□ -1.55
SMAD3-212ENST00000559937 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
SMAD3-212ENST00000559937 PDE6GP18545 87 aa5.33□□□□□ -1.56
SMAD3-212ENST00000559937 LINC00588Q9Y4M8 146 aa5.33□□□□□ -1.56
SMAD3-212ENST00000559937 IGLV5-37A0A075B6J1 123 aa5.32□□□□□ -1.56
SMAD3-212ENST00000559937 ATP5EP2Q5VTU8 51 aa5.32□□□□□ -1.56
SMAD3-212ENST00000559937 MRAPQ8TCY5 172 aa5.32□□□□□ -1.56
SMAD3-212ENST00000559937 RBM3P98179 157 aaKnown RBP5.31□□□□□ -1.56
SMAD3-212ENST00000559937 Q6ZQY7 126 aa5.31□□□□□ -1.56
SMAD3-212ENST00000559937 LINC00528Q8N1L1 170 aa5.31□□□□□ -1.56
SMAD3-212ENST00000559937 LINC00846Q9NV44 126 aa5.31□□□□□ -1.56
SMAD3-212ENST00000559937 FAM236AA0A1B0GUQ0 79 aa5.3□□□□□ -1.56
SMAD3-212ENST00000559937 FAM236BA0A1B0GV22 79 aa5.3□□□□□ -1.56
SMAD3-212ENST00000559937 Q6ZQT0 140 aa5.3□□□□□ -1.56
SMAD3-212ENST00000559937 Q6ZRP5 223 aa5.3□□□□□ -1.56
SMAD3-212ENST00000559937 USP17L23D6RBM5 183 aa5.29□□□□□ -1.56
SMAD3-212ENST00000559937 HIST1H4AP62805 103 aaKnown RBP5.29□□□□□ -1.56
SMAD3-212ENST00000559937 NKAPP1Q8N9T2 125 aa5.29□□□□□ -1.56
SMAD3-212ENST00000559937 KCNQ1DNQ9H478 68 aa5.29□□□□□ -1.56
SMAD3-212ENST00000559937 LAMTOR3Q9UHA4 124 aa5.29□□□□□ -1.56
SMAD3-212ENST00000559937 PRYO14603 147 aa5.28□□□□□ -1.56
SMAD3-212ENST00000559937 UBL5Q9BZL1 73 aa5.28□□□□□ -1.56
SMAD3-212ENST00000559937 TRBV7-4A0A0J9YYF1 115 aa5.27□□□□□ -1.57
SMAD3-212ENST00000559937 ATOX1O00244 68 aa5.27□□□□□ -1.57
SMAD3-212ENST00000559937 DSCR8Q96T75 97 aa5.27□□□□□ -1.57
SMAD3-212ENST00000559937 DNAH3Q8TD57 4116 aa5.26□□□□□ -1.57
SMAD3-212ENST00000559937 LOC107984640A0A0U1RRK4 108 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms