RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 MAJINQ3KP22 176 aa10.65□□□□□ -0.7
PSEN1-224ENST00000559361 SPACA4Q8TDM5 124 aa10.65□□□□□ -0.7
PSEN1-224ENST00000559361 A0A096LNI7 61 aa10.64□□□□□ -0.71
PSEN1-224ENST00000559361 HNRNPA3P51991 378 aaKnown RBP10.64□□□□□ -0.71
PSEN1-224ENST00000559361 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
PSEN1-224ENST00000559361 TIMM17BO60830 172 aa10.63□□□□□ -0.71
PSEN1-224ENST00000559361 PFN2P35080 140 aa10.63□□□□□ -0.71
PSEN1-224ENST00000559361 IGKV2-24A0A0C4DH68 120 aa10.62□□□□□ -0.71
PSEN1-224ENST00000559361 LINC00158P58513 81 aa10.62□□□□□ -0.71
PSEN1-224ENST00000559361 GAGE2EQ4V326 116 aa10.62□□□□□ -0.71
PSEN1-224ENST00000559361 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
PSEN1-224ENST00000559361 GAGE2DQ9UEU5 116 aa10.62□□□□□ -0.71
PSEN1-224ENST00000559361 SMIM6P0DI80 62 aa10.61□□□□□ -0.71
PSEN1-224ENST00000559361 S100A12P80511 92 aa10.61□□□□□ -0.71
PSEN1-224ENST00000559361 SPATA45Q537H7 98 aa10.61□□□□□ -0.71
PSEN1-224ENST00000559361 PAM16Q9Y3D7 125 aa10.61□□□□□ -0.71
PSEN1-224ENST00000559361 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-224ENST00000559361 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
PSEN1-224ENST00000559361 RPL37AP61513 92 aaKnown RBP10.6□□□□□ -0.71
PSEN1-224ENST00000559361 PCP2Q8IVA1 136 aa10.6□□□□□ -0.71
PSEN1-224ENST00000559361 DPH3Q96FX2 82 aa10.6□□□□□ -0.71
PSEN1-224ENST00000559361 DLEU1O43261 78 aa10.59□□□□□ -0.71
PSEN1-224ENST00000559361 CHTF8P0CG12 524 aa10.59□□□□□ -0.71
PSEN1-224ENST00000559361 COX8AP10176 69 aa10.59□□□□□ -0.71
PSEN1-224ENST00000559361 LOC105371267A0A1B0GV96 52 aa10.58□□□□□ -0.72
PSEN1-224ENST00000559361 TMEM238C9JI98 176 aa10.58□□□□□ -0.72
PSEN1-224ENST00000559361 TTTY13Q9BZ97 58 aa10.58□□□□□ -0.72
PSEN1-224ENST00000559361 SND1-IT1Q9HBX3 110 aa10.58□□□□□ -0.72
PSEN1-224ENST00000559361 PLAC8Q9NZF1 115 aa10.58□□□□□ -0.72
PSEN1-224ENST00000559361 C9orf129Q5T035 196 aaKnown RBP10.57□□□□□ -0.72
PSEN1-224ENST00000559361 Q6ZVH6 145 aa10.57□□□□□ -0.72
PSEN1-224ENST00000559361 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
PSEN1-224ENST00000559361 MIR7-3HGQ8N6C7 128 aa10.57□□□□□ -0.72
PSEN1-224ENST00000559361 COPS9Q8WXC6 57 aa10.57□□□□□ -0.72
PSEN1-224ENST00000559361 XAGE1AQ9HD64 81 aa10.57□□□□□ -0.72
PSEN1-224ENST00000559361 A0A087WYN8 130 aa10.56□□□□□ -0.72
PSEN1-224ENST00000559361 PANO1I0J062 215 aa10.56□□□□□ -0.72
PSEN1-224ENST00000559361 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
PSEN1-224ENST00000559361 LOC107984156A0A0G2JMH3 177 aa10.55□□□□□ -0.72
PSEN1-224ENST00000559361 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
PSEN1-224ENST00000559361 ARL17AQ8IVW1 177 aa10.55□□□□□ -0.72
PSEN1-224ENST00000559361 LITAFQ99732 161 aa10.55□□□□□ -0.72
PSEN1-224ENST00000559361 PPDPFQ9H3Y8 114 aa10.55□□□□□ -0.72
PSEN1-224ENST00000559361 RPL24P83731 157 aaKnown RBP10.54□□□□□ -0.72
PSEN1-224ENST00000559361 SLC25A34Q6PIV7 304 aa10.54□□□□□ -0.72
PSEN1-224ENST00000559361 SPANXDQ9BXN6 97 aa10.54□□□□□ -0.72
PSEN1-224ENST00000559361 SPANXCQ9NY87 97 aa10.54□□□□□ -0.72
PSEN1-224ENST00000559361 IFITM1P13164 125 aa10.52□□□□□ -0.73
PSEN1-224ENST00000559361 TP73-AS1Q9UF72 201 aa10.52□□□□□ -0.73
PSEN1-224ENST00000559361 IGLV5-37A0A075B6J1 123 aa10.51□□□□□ -0.73
PSEN1-224ENST00000559361 A0A1W2PNN7 141 aa10.51□□□□□ -0.73
PSEN1-224ENST00000559361 ADAMTSL4-AS1Q5T5F5 129 aa10.51□□□□□ -0.73
PSEN1-224ENST00000559361 C14orf144Q96I85 54 aa10.51□□□□□ -0.73
PSEN1-224ENST00000559361 SPANXB1Q9NS25 103 aaPredicted RBP10.51□□□□□ -0.73
PSEN1-224ENST00000559361 DAND5Q8N907 189 aa10.5□□□□□ -0.73
PSEN1-224ENST00000559361 HIGD1BQ9P298 99 aa10.5□□□□□ -0.73
PSEN1-224ENST00000559361 M0QXV9 152 aa10.49□□□□□ -0.73
PSEN1-224ENST00000559361 LBHQ53QV2 105 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-224ENST00000559361 FAM19A5Q7Z5A7 132 aaPredicted RBP10.49□□□□□ -0.73
PSEN1-224ENST00000559361 NKAPP1Q8N9T2 125 aa10.49□□□□□ -0.73
PSEN1-224ENST00000559361 C7orf33Q8WU49 177 aa10.49□□□□□ -0.73
PSEN1-224ENST00000559361 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
PSEN1-224ENST00000559361 NDUFC2O95298 119 aa10.48□□□□□ -0.73
PSEN1-224ENST00000559361 VPREB1P12018 145 aa10.48□□□□□ -0.73
PSEN1-224ENST00000559361 LINC00308Q8TCZ7 52 aa10.48□□□□□ -0.73
PSEN1-224ENST00000559361 SRSF9Q13242 221 aaKnown RBP eCLIP10.47□□□□□ -0.73
PSEN1-224ENST00000559361 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
PSEN1-224ENST00000559361 MRPL55Q7Z7F7 128 aaKnown RBP10.46□□□□□ -0.73
PSEN1-224ENST00000559361 C22orf24Q9Y442 160 aa10.46□□□□□ -0.73
PSEN1-224ENST00000559361 TRBV10-2A0A0K0K1G8 114 aa10.45□□□□□ -0.74
PSEN1-224ENST00000559361 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
PSEN1-224ENST00000559361 SOSTDC1Q6X4U4 206 aa10.44□□□□□ -0.74
PSEN1-224ENST00000559361 C12orf57Q99622 126 aa10.44□□□□□ -0.74
PSEN1-224ENST00000559361 M0R378 163 aa10.43□□□□□ -0.74
PSEN1-224ENST00000559361 HIST1H4GQ99525 98 aa10.43□□□□□ -0.74
PSEN1-224ENST00000559361 NPC2P61916 151 aa10.42□□□□□ -0.74
PSEN1-224ENST00000559361 TAL2Q16559 108 aa10.42□□□□□ -0.74
PSEN1-224ENST00000559361 C2orf91Q6ZV80 131 aa10.42□□□□□ -0.74
PSEN1-224ENST00000559361 LINC00518Q8N0U6 118 aa10.42□□□□□ -0.74
PSEN1-224ENST00000559361 PHF5AQ7RTV0 110 aaKnown RBP10.41□□□□□ -0.74
PSEN1-224ENST00000559361 UBE2BP63146 152 aa10.4□□□□□ -0.74
PSEN1-224ENST00000559361 MUSTN1Q8IVN3 82 aa10.4□□□□□ -0.74
PSEN1-224ENST00000559361 Q8NDZ9 215 aa10.4□□□□□ -0.74
PSEN1-224ENST00000559361 CBY1Q9Y3M2 126 aa10.4□□□□□ -0.74
PSEN1-224ENST00000559361 TSTD3H0UI37 97 aa10.39□□□□□ -0.75
PSEN1-224ENST00000559361 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
PSEN1-224ENST00000559361 LINC00167Q96N53 147 aa10.39□□□□□ -0.75
PSEN1-224ENST00000559361 NCR3O14931 201 aa10.37□□□□□ -0.75
PSEN1-224ENST00000559361 IGLV1-50A0A075B6I6 118 aa10.36□□□□□ -0.75
PSEN1-224ENST00000559361 HSD52Q0P140 79 aa10.36□□□□□ -0.75
PSEN1-224ENST00000559361 LINC01600Q96MT4 127 aa10.36□□□□□ -0.75
PSEN1-224ENST00000559361 TMEM238LA0A1B0GVL6 79 aa10.35□□□□□ -0.75
PSEN1-224ENST00000559361 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
PSEN1-224ENST00000559361 A6NJY4 79 aa10.35□□□□□ -0.75
PSEN1-224ENST00000559361 S100A7L2Q5SY68 101 aa10.35□□□□□ -0.75
PSEN1-224ENST00000559361 IGKV2-28A0A075B6P5 120 aa10.34□□□□□ -0.75
PSEN1-224ENST00000559361 IGKV2D-28P01615 120 aa10.34□□□□□ -0.75
PSEN1-224ENST00000559361 IGLV6-57P01721 117 aa10.34□□□□□ -0.75
PSEN1-224ENST00000559361 DDTP30046 118 aa10.34□□□□□ -0.75
PSEN1-224ENST00000559361 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms