RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SND1-IT1Q9HBX3 110 aa9.33□□□□□ -0.92
SNRPA1-207ENST00000559309 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
SNRPA1-207ENST00000559309 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
SNRPA1-207ENST00000559309 MIR7-3HGQ8N6C7 128 aa9.32□□□□□ -0.92
SNRPA1-207ENST00000559309 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
SNRPA1-207ENST00000559309 HERC1Q15751 4861 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 IGLV5-37A0A075B6J1 123 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 SMIM6P0DI80 62 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 MEIG1Q5JSS6 88 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 Q8NDZ9 215 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 PPDPFQ9H3Y8 114 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 PAM16Q9Y3D7 125 aa9.31□□□□□ -0.92
SNRPA1-207ENST00000559309 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
SNRPA1-207ENST00000559309 FAM168BA1KXE4 195 aa9.3□□□□□ -0.92
SNRPA1-207ENST00000559309 LINC00158P58513 81 aa9.3□□□□□ -0.92
SNRPA1-207ENST00000559309 EIF4EBP3O60516 100 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-207ENST00000559309 SERTAD4-AS1Q5TG53 156 aa9.29□□□□□ -0.92
SNRPA1-207ENST00000559309 SPANXDQ9BXN6 97 aa9.29□□□□□ -0.92
SNRPA1-207ENST00000559309 SPANXCQ9NY87 97 aa9.29□□□□□ -0.92
SNRPA1-207ENST00000559309 TP73-AS1Q9UF72 201 aa9.29□□□□□ -0.92
SNRPA1-207ENST00000559309 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
SNRPA1-207ENST00000559309 VPREB1P12018 145 aa9.28□□□□□ -0.92
SNRPA1-207ENST00000559309 SOSTDC1Q6X4U4 206 aa9.28□□□□□ -0.92
SNRPA1-207ENST00000559309 HAMPP81172 84 aa9.27□□□□□ -0.93
SNRPA1-207ENST00000559309 DAND5Q8N907 189 aa9.27□□□□□ -0.93
SNRPA1-207ENST00000559309 SPANXB1Q9NS25 103 aaPredicted RBP9.27□□□□□ -0.93
SNRPA1-207ENST00000559309 Q6ZVH6 145 aa9.26□□□□□ -0.93
SNRPA1-207ENST00000559309 C14orf144Q96I85 54 aa9.26□□□□□ -0.93
SNRPA1-207ENST00000559309 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
SNRPA1-207ENST00000559309 SCGB1D4Q6XE38 83 aa9.25□□□□□ -0.93
SNRPA1-207ENST00000559309 C2orf91Q6ZV80 131 aa9.25□□□□□ -0.93
SNRPA1-207ENST00000559309 LINC00308Q8TCZ7 52 aa9.25□□□□□ -0.93
SNRPA1-207ENST00000559309 HIGD1BQ9P298 99 aa9.25□□□□□ -0.93
SNRPA1-207ENST00000559309 NDUFC2O95298 119 aa9.24□□□□□ -0.93
SNRPA1-207ENST00000559309 SLC25A34Q6PIV7 304 aa9.24□□□□□ -0.93
SNRPA1-207ENST00000559309 Q8N1X5 172 aa9.24□□□□□ -0.93
SNRPA1-207ENST00000559309 KRTAP10-4P60372 401 aaPredicted RBP9.23□□□□□ -0.93
SNRPA1-207ENST00000559309 C22orf24Q9Y442 160 aa9.23□□□□□ -0.93
SNRPA1-207ENST00000559309 IFITM1P13164 125 aa9.22□□□□□ -0.93
SNRPA1-207ENST00000559309 S100A12P80511 92 aa9.22□□□□□ -0.93
SNRPA1-207ENST00000559309 FAM19A5Q7Z5A7 132 aaPredicted RBP9.22□□□□□ -0.93
SNRPA1-207ENST00000559309 M0QXV9 152 aa9.21□□□□□ -0.94
SNRPA1-207ENST00000559309 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
SNRPA1-207ENST00000559309 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.94
SNRPA1-207ENST00000559309 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
SNRPA1-207ENST00000559309 DPH3Q96FX2 82 aa9.2□□□□□ -0.94
SNRPA1-207ENST00000559309 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
SNRPA1-207ENST00000559309 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
SNRPA1-207ENST00000559309 TRBV10-2A0A0K0K1G8 114 aa9.19□□□□□ -0.94
SNRPA1-207ENST00000559309 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
SNRPA1-207ENST00000559309 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
SNRPA1-207ENST00000559309 MUSTN1Q8IVN3 82 aa9.18□□□□□ -0.94
SNRPA1-207ENST00000559309 LINC00518Q8N0U6 118 aa9.18□□□□□ -0.94
SNRPA1-207ENST00000559309 LINC00167Q96N53 147 aa9.18□□□□□ -0.94
SNRPA1-207ENST00000559309 IGKV2-28A0A075B6P5 120 aa9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 M0R378 163 aa9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 IGKV2D-28P01615 120 aa9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 SMR3BP02814 79 aaPredicted RBP9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 PRR3P79522 188 aaKnown RBP9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 LINC00528Q8N1L1 170 aa9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 C12orf57Q99622 126 aa9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 UQCR10Q9UDW1 63 aa9.17□□□□□ -0.94
SNRPA1-207ENST00000559309 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
SNRPA1-207ENST00000559309 NPC2P61916 151 aa9.16□□□□□ -0.94
SNRPA1-207ENST00000559309 LBHQ53QV2 105 aaPredicted RBP9.16□□□□□ -0.94
SNRPA1-207ENST00000559309 MIEN1Q9BRT3 115 aa9.16□□□□□ -0.94
SNRPA1-207ENST00000559309 TAL2Q16559 108 aa9.15□□□□□ -0.94
SNRPA1-207ENST00000559309 NKAPP1Q8N9T2 125 aa9.15□□□□□ -0.94
SNRPA1-207ENST00000559309 COPS9Q8WXC6 57 aa9.15□□□□□ -0.94
SNRPA1-207ENST00000559309 IGLV6-57P01721 117 aa9.14□□□□□ -0.95
SNRPA1-207ENST00000559309 SRSF9Q13242 221 aaKnown RBP eCLIP9.13□□□□□ -0.95
SNRPA1-207ENST00000559309 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
SNRPA1-207ENST00000559309 LCE2BO14633 110 aa9.12□□□□□ -0.95
SNRPA1-207ENST00000559309 LINC00337Q8N6G1 96 aa9.12□□□□□ -0.95
SNRPA1-207ENST00000559309 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
SNRPA1-207ENST00000559309 MYCBP2O75592 4640 aa9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 SRRM2Q9UQ35 2752 aaKnown RBP9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 NCR3O14931 201 aa9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 SPRR1AP35321 89 aa9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 Q5VSD8 79 aa9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 HIST1H4GQ99525 98 aa9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 PRO1933Q9H354 126 aa9.11□□□□□ -0.95
SNRPA1-207ENST00000559309 TRBV10-3A0A0K0K1G6 114 aa9.1□□□□□ -0.95
SNRPA1-207ENST00000559309 A4D1N5 150 aa9.1□□□□□ -0.95
SNRPA1-207ENST00000559309 GAGE10A6NGK3 116 aa9.1□□□□□ -0.95
SNRPA1-207ENST00000559309 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
SNRPA1-207ENST00000559309 RPL37AP8A6NKH3 93 aa9.09□□□□□ -0.95
SNRPA1-207ENST00000559309 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
SNRPA1-207ENST00000559309 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
SNRPA1-207ENST00000559309 CEND1Q8N111 149 aa9.09□□□□□ -0.95
SNRPA1-207ENST00000559309 UBE2BP63146 152 aa9.08□□□□□ -0.96
SNRPA1-207ENST00000559309 HSD52Q0P140 79 aa9.08□□□□□ -0.96
SNRPA1-207ENST00000559309 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
SNRPA1-207ENST00000559309 PRYO14603 147 aa9.07□□□□□ -0.96
SNRPA1-207ENST00000559309 DDTP30046 118 aa9.07□□□□□ -0.96
SNRPA1-207ENST00000559309 TMEM126AQ9H061 195 aa9.07□□□□□ -0.96
SNRPA1-207ENST00000559309 PLA2G1BP04054 148 aaKnown RBP9.06□□□□□ -0.96
SNRPA1-207ENST00000559309 BCE1O60756 84 aa9.05□□□□□ -0.96
SNRPA1-207ENST00000559309 HNRNPA3P51991 378 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms