RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CTAG1AP78358 180 aa9.35□□□□□ -0.91
CDC42BPB-205ENST00000559245 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
CDC42BPB-205ENST00000559245 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 G0S2P27469 103 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 NDUFA6P56556 154 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 PDZD11Q5EBL8 140 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 TOMM6Q96B49 74 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 TIMM17AQ99595 171 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 PPDPFQ9H3Y8 114 aa9.34□□□□□ -0.91
CDC42BPB-205ENST00000559245 HBDP02042 147 aa9.33□□□□□ -0.92
CDC42BPB-205ENST00000559245 PRLHP81277 87 aa9.33□□□□□ -0.92
CDC42BPB-205ENST00000559245 HIST3H2BBQ8N257 126 aa9.33□□□□□ -0.92
CDC42BPB-205ENST00000559245 HSBP1O75506 76 aa9.32□□□□□ -0.92
CDC42BPB-205ENST00000559245 S100A6P06703 90 aa9.32□□□□□ -0.92
CDC42BPB-205ENST00000559245 TINCRA0A1B0GVN0 87 aa9.3□□□□□ -0.92
CDC42BPB-205ENST00000559245 FAM19A1Q7Z5A9 133 aa9.3□□□□□ -0.92
CDC42BPB-205ENST00000559245 C3orf22Q8N5N4 141 aa9.3□□□□□ -0.92
CDC42BPB-205ENST00000559245 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
CDC42BPB-205ENST00000559245 SNRPEP62304 92 aaKnown RBP9.29□□□□□ -0.92
CDC42BPB-205ENST00000559245 ERASQ7Z444 233 aa9.29□□□□□ -0.92
CDC42BPB-205ENST00000559245 FAM19A2Q8N3H0 131 aa9.29□□□□□ -0.92
CDC42BPB-205ENST00000559245 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
CDC42BPB-205ENST00000559245 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
CDC42BPB-205ENST00000559245 PMCHL1Q16048 86 aa9.28□□□□□ -0.92
CDC42BPB-205ENST00000559245 SCGB3A1Q96QR1 104 aa9.28□□□□□ -0.92
CDC42BPB-205ENST00000559245 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
CDC42BPB-205ENST00000559245 TMEM126AQ9H061 195 aa9.28□□□□□ -0.92
CDC42BPB-205ENST00000559245 TMEM238C9JI98 176 aa9.27□□□□□ -0.93
CDC42BPB-205ENST00000559245 PLEKHB2Q96CS7 222 aa9.27□□□□□ -0.93
CDC42BPB-205ENST00000559245 ATP5LO75964 103 aa9.26□□□□□ -0.93
CDC42BPB-205ENST00000559245 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
CDC42BPB-205ENST00000559245 VPREB1P12018 145 aa9.25□□□□□ -0.93
CDC42BPB-205ENST00000559245 PFN2P35080 140 aa9.25□□□□□ -0.93
CDC42BPB-205ENST00000559245 SPAG11AQ6PDA7 123 aa9.25□□□□□ -0.93
CDC42BPB-205ENST00000559245 HSPB8Q9UJY1 196 aa9.25□□□□□ -0.93
CDC42BPB-205ENST00000559245 M0R378 163 aa9.24□□□□□ -0.93
CDC42BPB-205ENST00000559245 LINC01547P58512 204 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-205ENST00000559245 FP248Q71RG6 208 aaPredicted RBP9.24□□□□□ -0.93
CDC42BPB-205ENST00000559245 LINC00337Q8N6G1 96 aa9.24□□□□□ -0.93
CDC42BPB-205ENST00000559245 CST9LQ9H4G1 147 aa9.24□□□□□ -0.93
CDC42BPB-205ENST00000559245 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
CDC42BPB-205ENST00000559245 IFI27L1Q96BM0 104 aa9.23□□□□□ -0.93
CDC42BPB-205ENST00000559245 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
CDC42BPB-205ENST00000559245 S100A2P29034 98 aa9.22□□□□□ -0.93
CDC42BPB-205ENST00000559245 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
CDC42BPB-205ENST00000559245 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
CDC42BPB-205ENST00000559245 FABP4P15090 132 aa9.21□□□□□ -0.94
CDC42BPB-205ENST00000559245 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
CDC42BPB-205ENST00000559245 KRTAP13-3Q3SY46 172 aa9.21□□□□□ -0.94
CDC42BPB-205ENST00000559245 HIGD2AQ9BW72 106 aa9.21□□□□□ -0.94
CDC42BPB-205ENST00000559245 H3BRM9 83 aa9.2□□□□□ -0.94
CDC42BPB-205ENST00000559245 PMVKQ15126 192 aa9.2□□□□□ -0.94
CDC42BPB-205ENST00000559245 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
CDC42BPB-205ENST00000559245 C3orf79P0CE67 100 aa9.19□□□□□ -0.94
CDC42BPB-205ENST00000559245 Q8NDZ9 215 aa9.19□□□□□ -0.94
CDC42BPB-205ENST00000559245 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
CDC42BPB-205ENST00000559245 KRTAP4-1Q9BYQ7 146 aa9.19□□□□□ -0.94
CDC42BPB-205ENST00000559245 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
CDC42BPB-205ENST00000559245 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
CDC42BPB-205ENST00000559245 SYS1-DBNDD2H3BUS1 97 aa9.18□□□□□ -0.94
CDC42BPB-205ENST00000559245 PET117Q6UWS5 81 aa9.18□□□□□ -0.94
CDC42BPB-205ENST00000559245 COX17Q14061 63 aa9.17□□□□□ -0.94
CDC42BPB-205ENST00000559245 LINC01545Q5VT33 79 aa9.17□□□□□ -0.94
CDC42BPB-205ENST00000559245 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
CDC42BPB-205ENST00000559245 DAND5Q8N907 189 aa9.16□□□□□ -0.94
CDC42BPB-205ENST00000559245 CRCT1Q9UGL9 99 aa9.16□□□□□ -0.94
CDC42BPB-205ENST00000559245 LOC105371267A0A1B0GV96 52 aa9.15□□□□□ -0.94
CDC42BPB-205ENST00000559245 IGLC3P0DOY3 106 aa9.15□□□□□ -0.94
CDC42BPB-205ENST00000559245 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.94
CDC42BPB-205ENST00000559245 Q8NBF4 154 aa9.15□□□□□ -0.94
CDC42BPB-205ENST00000559245 ZNF625Q96I27 306 aaPredicted RBP9.15□□□□□ -0.94
CDC42BPB-205ENST00000559245 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPB-205ENST00000559245 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPB-205ENST00000559245 AKR1D1P51857 326 aa9.13□□□□□ -0.95
CDC42BPB-205ENST00000559245 KRTDAPP60985 99 aa9.12□□□□□ -0.95
CDC42BPB-205ENST00000559245 JOSD1Q15040 202 aaPredicted RBP9.12□□□□□ -0.95
CDC42BPB-205ENST00000559245 SPINK1P00995 79 aa9.11□□□□□ -0.95
CDC42BPB-205ENST00000559245 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
CDC42BPB-205ENST00000559245 PLNP26678 52 aa9.1□□□□□ -0.95
CDC42BPB-205ENST00000559245 C20orf202A1L168 122 aa9.09□□□□□ -0.95
CDC42BPB-205ENST00000559245 DPM2O94777 84 aa9.09□□□□□ -0.95
CDC42BPB-205ENST00000559245 PYY3Q5JQD4 70 aa9.09□□□□□ -0.95
CDC42BPB-205ENST00000559245 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
CDC42BPB-205ENST00000559245 SFTA2Q6UW10 78 aa9.08□□□□□ -0.96
CDC42BPB-205ENST00000559245 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
CDC42BPB-205ENST00000559245 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
CDC42BPB-205ENST00000559245 PRYO14603 147 aa9.07□□□□□ -0.96
CDC42BPB-205ENST00000559245 IGKCP01834 107 aa9.07□□□□□ -0.96
CDC42BPB-205ENST00000559245 LINC00158P58513 81 aa9.07□□□□□ -0.96
CDC42BPB-205ENST00000559245 NDUFA12Q9UI09 145 aa9.07□□□□□ -0.96
CDC42BPB-205ENST00000559245 H0Y8G0 127 aa9.06□□□□□ -0.96
CDC42BPB-205ENST00000559245 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
CDC42BPB-205ENST00000559245 PMCHL2Q9BQD1 86 aa9.05□□□□□ -0.96
CDC42BPB-205ENST00000559245 SMIM6P0DI80 62 aa9.04□□□□□ -0.96
CDC42BPB-205ENST00000559245 SPRR1AP35321 89 aa9.04□□□□□ -0.96
CDC42BPB-205ENST00000559245 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
CDC42BPB-205ENST00000559245 TMEM170BQ5T4T1 132 aa9.04□□□□□ -0.96
CDC42BPB-205ENST00000559245 Q8N377 158 aa9.04□□□□□ -0.96
CDC42BPB-205ENST00000559245 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms