RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 IGKV2D-24A0A075B6R9 120 aa7.06□□□□□ -1.28
TPM1-210ENST00000558264 DNAL4O96015 105 aa7.06□□□□□ -1.28
TPM1-210ENST00000558264 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
TPM1-210ENST00000558264 RPL18AQ02543 176 aaKnown RBP7.05□□□□□ -1.28
TPM1-210ENST00000558264 KRTAP26-1Q6PEX3 210 aa7.05□□□□□ -1.28
TPM1-210ENST00000558264 C15orf53Q8NAA6 179 aa7.05□□□□□ -1.28
TPM1-210ENST00000558264 CAMK2N2Q96S95 79 aa7.04□□□□□ -1.28
TPM1-210ENST00000558264 HUWE1Q7Z6Z7 4374 aaKnown RBP7.04□□□□□ -1.28
TPM1-210ENST00000558264 TTC32Q5I0X7 151 aa7.04□□□□□ -1.28
TPM1-210ENST00000558264 S100A7L2Q5SY68 101 aa7.04□□□□□ -1.28
TPM1-210ENST00000558264 C15orf56Q8N910 161 aa7.04□□□□□ -1.28
TPM1-210ENST00000558264 C1orf43Q9BWL3 253 aa7.04□□□□□ -1.28
TPM1-210ENST00000558264 C6orf99Q4VX62 202 aa7.03□□□□□ -1.28
TPM1-210ENST00000558264 Q6ZRU5 148 aa7.03□□□□□ -1.28
TPM1-210ENST00000558264 H0YGX0 51 aa7.03□□□□□ -1.28
TPM1-210ENST00000558264 NDUFC2O95298 119 aa7.02□□□□□ -1.29
TPM1-210ENST00000558264 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
TPM1-210ENST00000558264 GAGE2EQ4V326 116 aa7.02□□□□□ -1.29
TPM1-210ENST00000558264 TM2D3Q9BRN9 247 aa7.02□□□□□ -1.29
TPM1-210ENST00000558264 GAGE2DQ9UEU5 116 aa7.02□□□□□ -1.29
TPM1-210ENST00000558264 LINC01556Q5JQF7 62 aa7.01□□□□□ -1.29
TPM1-210ENST00000558264 LINC00588Q9Y4M8 146 aa7.01□□□□□ -1.29
TPM1-210ENST00000558264 TRAV10A0A0B4J240 114 aa7.01□□□□□ -1.29
TPM1-210ENST00000558264 MDFIQ99750 246 aa7.01□□□□□ -1.29
TPM1-210ENST00000558264 CASC10Q5T4H9 136 aa7□□□□□ -1.29
TPM1-210ENST00000558264 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
TPM1-210ENST00000558264 STAB2Q8WWQ8 2551 aa7□□□□□ -1.29
TPM1-210ENST00000558264 COL7A1Q02388 2944 aa7□□□□□ -1.29
TPM1-210ENST00000558264 SNCGO76070 127 aa6.99□□□□□ -1.29
TPM1-210ENST00000558264 GAGE2AQ6NT46 116 aa6.99□□□□□ -1.29
TPM1-210ENST00000558264 TRBV10-3A0A0K0K1G6 114 aa6.99□□□□□ -1.29
TPM1-210ENST00000558264 LYSTQ99698 3801 aa6.98□□□□□ -1.29
TPM1-210ENST00000558264 GVQW2A0A096LPI5 108 aaPredicted RBP6.98□□□□□ -1.29
TPM1-210ENST00000558264 Q8N814 137 aa6.98□□□□□ -1.29
TPM1-210ENST00000558264 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
TPM1-210ENST00000558264 SMCR5Q8TEV8 140 aa6.97□□□□□ -1.29
TPM1-210ENST00000558264 DNAH10OSP0CZ25 163 aa6.97□□□□□ -1.29
TPM1-210ENST00000558264 ORMDL1Q9P0S3 153 aa6.97□□□□□ -1.29
TPM1-210ENST00000558264 Q6ZRP5 223 aa6.96□□□□□ -1.29
TPM1-210ENST00000558264 IGLV6-57P01721 117 aa6.95□□□□□ -1.3
TPM1-210ENST00000558264 FAM240AA0A1B0GVK7 77 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 NDUFC2-KCTD14E9PQ53 114 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 SYCNQ0VAF6 134 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 TRAV23DV6A0A075B6W5 121 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 INAFM2P0DMQ5 153 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 VPREB1P12018 145 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 GAGE2BQ13066 116 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 LINC00575Q6W349 94 aa6.94□□□□□ -1.3
TPM1-210ENST00000558264 USP17L23D6RBM5 183 aa6.93□□□□□ -1.3
TPM1-210ENST00000558264 C2orf48Q96LS8 159 aa6.93□□□□□ -1.3
TPM1-210ENST00000558264 MUC7Q8TAX7 377 aa6.92□□□□□ -1.3
TPM1-210ENST00000558264 hADV29S1A0JD25 119 aa6.92□□□□□ -1.3
TPM1-210ENST00000558264 LINC00167Q96N53 147 aa6.92□□□□□ -1.3
TPM1-210ENST00000558264 ZNF73O43830 326 aaPredicted RBP6.91□□□□□ -1.3
TPM1-210ENST00000558264 Q6ZQY7 126 aa6.91□□□□□ -1.3
TPM1-210ENST00000558264 DIRC1Q969H9 104 aa6.91□□□□□ -1.3
TPM1-210ENST00000558264 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
TPM1-210ENST00000558264 SERTAD4-AS1Q5TG53 156 aa6.91□□□□□ -1.3
TPM1-210ENST00000558264 OBSCN-AS1Q96MR7 158 aa6.9□□□□□ -1.3
TPM1-210ENST00000558264 DNAH9Q9NYC9 4486 aa6.9□□□□□ -1.31
TPM1-210ENST00000558264 DNAH10Q8IVF4 4471 aa6.9□□□□□ -1.31
TPM1-210ENST00000558264 FAM168BA1KXE4 195 aa6.9□□□□□ -1.31
TPM1-210ENST00000558264 ACYP1P07311 99 aa6.9□□□□□ -1.31
TPM1-210ENST00000558264 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.31
TPM1-210ENST00000558264 DNAH1Q9P2D7 4330 aa6.89□□□□□ -1.31
TPM1-210ENST00000558264 A0A1B0GX51 115 aa6.89□□□□□ -1.31
TPM1-210ENST00000558264 TMEM256-PLSCR3K7ERE1 68 aa6.89□□□□□ -1.31
TPM1-210ENST00000558264 LINC00846Q9NV44 126 aa6.89□□□□□ -1.31
TPM1-210ENST00000558264 M0R378 163 aa6.88□□□□□ -1.31
TPM1-210ENST00000558264 ANAPC13Q9BS18 74 aa6.88□□□□□ -1.31
TPM1-210ENST00000558264 COX7BP24311 80 aa6.88□□□□□ -1.31
TPM1-210ENST00000558264 LAMTOR3Q9UHA4 124 aa6.88□□□□□ -1.31
TPM1-210ENST00000558264 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
TPM1-210ENST00000558264 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
TPM1-210ENST00000558264 NDUFV3P56181 108 aaKnown RBP6.86□□□□□ -1.31
TPM1-210ENST00000558264 UBE2DNLQ8IWF7 75 aa6.86□□□□□ -1.31
TPM1-210ENST00000558264 NKAPP1Q8N9T2 125 aa6.86□□□□□ -1.31
TPM1-210ENST00000558264 SS18L2Q9UHA2 77 aa6.86□□□□□ -1.31
TPM1-210ENST00000558264 IGKV3D-7A0A0C4DH55 119 aa6.86□□□□□ -1.31
TPM1-210ENST00000558264 LINC00643Q86TS7 51 aa6.86□□□□□ -1.31
TPM1-210ENST00000558264 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
TPM1-210ENST00000558264 ELOF1P60002 83 aaKnown RBP6.85□□□□□ -1.31
TPM1-210ENST00000558264 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
TPM1-210ENST00000558264 C7orf33Q8WU49 177 aa6.85□□□□□ -1.31
TPM1-210ENST00000558264 M0R2N4 97 aa6.85□□□□□ -1.31
TPM1-210ENST00000558264 NHLRC4P0CG21 123 aaPredicted RBP6.85□□□□□ -1.31
TPM1-210ENST00000558264 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
TPM1-210ENST00000558264 DNAH7Q8WXX0 4024 aa6.84□□□□□ -1.31
TPM1-210ENST00000558264 JMJD7-PLA2G4BH0Y9G9 81 aa6.84□□□□□ -1.31
TPM1-210ENST00000558264 CCKP06307 115 aa6.84□□□□□ -1.31
TPM1-210ENST00000558264 FAM19A5Q7Z5A7 132 aaPredicted RBP6.84□□□□□ -1.31
TPM1-210ENST00000558264 TRBV7-7A0A0K0K1E9 115 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 FAM236AA0A1B0GUQ0 79 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 FAM236BA0A1B0GV22 79 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 Q6Q795 121 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 RMI2Q96E14 147 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.83□□□□□ -1.32
TPM1-210ENST00000558264 KRTAP7-1Q8IUC3 87 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 APLNQ9ULZ1 77 aa6.83□□□□□ -1.32
TPM1-210ENST00000558264 PSCAO43653 123 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms