RNA–Protein interactions for RNA: ENST00000558240.1

CDK12-203, Transcript of cyclin dependent kinase 12, humanhuman

TSL 4

Gene CDK12, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-203ENST00000558240 SND1-IT1Q9HBX3 110 aa7.47□□□□□ -1.21
CDK12-203ENST00000558240 TP73-AS1Q9UF72 201 aa7.47□□□□□ -1.21
CDK12-203ENST00000558240 C22orf24Q9Y442 160 aa7.47□□□□□ -1.21
CDK12-203ENST00000558240 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
CDK12-203ENST00000558240 SNRPEP62304 92 aaKnown RBP7.46□□□□□ -1.22
CDK12-203ENST00000558240 LBHQ53QV2 105 aaPredicted RBP7.46□□□□□ -1.22
CDK12-203ENST00000558240 MEIG1Q5JSS6 88 aa7.46□□□□□ -1.22
CDK12-203ENST00000558240 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
CDK12-203ENST00000558240 C5orf52A6NGY3 159 aa7.45□□□□□ -1.22
CDK12-203ENST00000558240 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
CDK12-203ENST00000558240 PSORS1C2Q9UIG4 136 aa7.45□□□□□ -1.22
CDK12-203ENST00000558240 MRPL55Q7Z7F7 128 aaKnown RBP7.44□□□□□ -1.22
CDK12-203ENST00000558240 A0A0U1RRA0 63 aa7.43□□□□□ -1.22
CDK12-203ENST00000558240 HNRNPA3P51991 378 aaKnown RBP7.43□□□□□ -1.22
CDK12-203ENST00000558240 UBE2BP63146 152 aa7.43□□□□□ -1.22
CDK12-203ENST00000558240 RPL24P83731 157 aaKnown RBP7.43□□□□□ -1.22
CDK12-203ENST00000558240 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
CDK12-203ENST00000558240 MIR7-3HGQ8N6C7 128 aa7.42□□□□□ -1.22
CDK12-203ENST00000558240 NKAPP1Q8N9T2 125 aa7.42□□□□□ -1.22
CDK12-203ENST00000558240 VPREB1P12018 145 aa7.41□□□□□ -1.22
CDK12-203ENST00000558240 C1orf137Q5JT78 98 aa7.41□□□□□ -1.22
CDK12-203ENST00000558240 LINC00167Q96N53 147 aa7.41□□□□□ -1.22
CDK12-203ENST00000558240 IGKV2D-26A0A0A0MRZ7 120 aa7.4□□□□□ -1.22
CDK12-203ENST00000558240 LOC107984156A0A0G2JMH3 177 aa7.4□□□□□ -1.22
CDK12-203ENST00000558240 A0A0J9YXY3 114 aa7.4□□□□□ -1.22
CDK12-203ENST00000558240 SRSF9Q13242 221 aaKnown RBP eCLIP7.4□□□□□ -1.22
CDK12-203ENST00000558240 ARL17AQ8IVW1 177 aa7.4□□□□□ -1.22
CDK12-203ENST00000558240 ATOH7Q8N100 152 aa7.4□□□□□ -1.22
CDK12-203ENST00000558240 SPINK6Q6UWN8 80 aa7.39□□□□□ -1.23
CDK12-203ENST00000558240 ZNF815PA8K554 130 aa7.38□□□□□ -1.23
CDK12-203ENST00000558240 IGLV7-43P04211 117 aa7.38□□□□□ -1.23
CDK12-203ENST00000558240 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
CDK12-203ENST00000558240 BOD1L2Q8IYS8 172 aa7.38□□□□□ -1.23
CDK12-203ENST00000558240 Q8NDZ9 215 aa7.38□□□□□ -1.23
CDK12-203ENST00000558240 GAGE10A6NGK3 116 aa7.37□□□□□ -1.23
CDK12-203ENST00000558240 RPL37AP8A6NKH3 93 aa7.37□□□□□ -1.23
CDK12-203ENST00000558240 KRTAP29-1A8MX34 341 aaPredicted RBP7.37□□□□□ -1.23
CDK12-203ENST00000558240 TIMM17BO60830 172 aa7.37□□□□□ -1.23
CDK12-203ENST00000558240 DAND5Q8N907 189 aa7.37□□□□□ -1.23
CDK12-203ENST00000558240 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
CDK12-203ENST00000558240 IGLV1-50A0A075B6I6 118 aa7.36□□□□□ -1.23
CDK12-203ENST00000558240 M0R378 163 aa7.36□□□□□ -1.23
CDK12-203ENST00000558240 OXTP01178 125 aa7.36□□□□□ -1.23
CDK12-203ENST00000558240 ADAMTSL4-AS1Q5T5F5 129 aa7.36□□□□□ -1.23
CDK12-203ENST00000558240 MIEN1Q9BRT3 115 aa7.36□□□□□ -1.23
CDK12-203ENST00000558240 TTTY13Q9BZ97 58 aa7.36□□□□□ -1.23
CDK12-203ENST00000558240 HSBP1L1C9JCN9 74 aa7.35□□□□□ -1.23
CDK12-203ENST00000558240 SCGB1D1O95968 90 aa7.35□□□□□ -1.23
CDK12-203ENST00000558240 LITAFQ99732 161 aa7.35□□□□□ -1.23
CDK12-203ENST00000558240 TNXBP22105 4242 aa7.35□□□□□ -1.23
CDK12-203ENST00000558240 HERC1Q15751 4861 aa7.34□□□□□ -1.23
CDK12-203ENST00000558240 BCE1O60756 84 aa7.34□□□□□ -1.23
CDK12-203ENST00000558240 IGKV2-28A0A075B6P5 120 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 NDUFC2O95298 119 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 IGKV2D-28P01615 120 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 SCGB1D4Q6XE38 83 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 PCP2Q8IVA1 136 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 DIRC1Q969H9 104 aa7.33□□□□□ -1.24
CDK12-203ENST00000558240 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
CDK12-203ENST00000558240 ZNF861PO60384 105 aa7.32□□□□□ -1.24
CDK12-203ENST00000558240 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
CDK12-203ENST00000558240 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
CDK12-203ENST00000558240 J3QL48 77 aa7.31□□□□□ -1.24
CDK12-203ENST00000558240 NCR3O14931 201 aa7.31□□□□□ -1.24
CDK12-203ENST00000558240 LINC00308Q8TCZ7 52 aa7.31□□□□□ -1.24
CDK12-203ENST00000558240 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
CDK12-203ENST00000558240 H0Y9J4 135 aa7.3□□□□□ -1.24
CDK12-203ENST00000558240 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
CDK12-203ENST00000558240 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
CDK12-203ENST00000558240 NPC2P61916 151 aa7.3□□□□□ -1.24
CDK12-203ENST00000558240 Q6ZVH6 145 aa7.3□□□□□ -1.24
CDK12-203ENST00000558240 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
CDK12-203ENST00000558240 TMEM126AQ9H061 195 aa7.3□□□□□ -1.24
CDK12-203ENST00000558240 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
CDK12-203ENST00000558240 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
CDK12-203ENST00000558240 COPS9Q8WXC6 57 aa7.29□□□□□ -1.24
CDK12-203ENST00000558240 LINC01600Q96MT4 127 aa7.29□□□□□ -1.24
CDK12-203ENST00000558240 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
CDK12-203ENST00000558240 TMA7Q9Y2S6 64 aaKnown RBP7.29□□□□□ -1.24
CDK12-203ENST00000558240 TRBV10-3A0A0K0K1G6 114 aa7.28□□□□□ -1.24
CDK12-203ENST00000558240 PRYO14603 147 aa7.28□□□□□ -1.24
CDK12-203ENST00000558240 S100A12P80511 92 aa7.28□□□□□ -1.24
CDK12-203ENST00000558240 KRTAP13-1Q8IUC0 172 aa7.28□□□□□ -1.24
CDK12-203ENST00000558240 PPDPFQ9H3Y8 114 aa7.28□□□□□ -1.24
CDK12-203ENST00000558240 IFITM1P13164 125 aa7.27□□□□□ -1.25
CDK12-203ENST00000558240 DDTP30046 118 aa7.27□□□□□ -1.25
CDK12-203ENST00000558240 UBE2AP49459 152 aa7.27□□□□□ -1.25
CDK12-203ENST00000558240 IGLV6-57P01721 117 aa7.26□□□□□ -1.25
CDK12-203ENST00000558240 SPRR1AP35321 89 aa7.26□□□□□ -1.25
CDK12-203ENST00000558240 S100A7L2Q5SY68 101 aa7.26□□□□□ -1.25
CDK12-203ENST00000558240 FAM19A1Q7Z5A9 133 aa7.26□□□□□ -1.25
CDK12-203ENST00000558240 MT1HL1P0DM35 61 aa7.25□□□□□ -1.25
CDK12-203ENST00000558240 COX8AP10176 69 aa7.25□□□□□ -1.25
CDK12-203ENST00000558240 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
CDK12-203ENST00000558240 LINC00337Q8N6G1 96 aa7.25□□□□□ -1.25
CDK12-203ENST00000558240 DLEU1O43261 78 aa7.24□□□□□ -1.25
CDK12-203ENST00000558240 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
CDK12-203ENST00000558240 CBY1Q9Y3M2 126 aa7.24□□□□□ -1.25
CDK12-203ENST00000558240 KRTAP4-16G5E9R7 235 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms