RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CRIP1P50238 77 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 PRR15LQ9BU68 103 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 KCNQ1DNQ9H478 68 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 KLK9Q9UKQ9 250 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 WDFY3Q8IZQ1 3526 aa0.84□□□□□ -2.27
HIF1A-212ENST00000557538 VPS13DQ5THJ4 4388 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 TRBV10-1A0A0K0K1A3 114 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 IGKV2-29A2NJV5 120 aaPredicted RBP0.84□□□□□ -2.28
HIF1A-212ENST00000557538 A6NED7 52 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 NUPR2A6NF83 97 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 C10orf128Q5T292 105 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 FDCSPQ8NFU4 85 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 ARHGAP5-AS1Q96IT6 56 aa0.84□□□□□ -2.28
HIF1A-212ENST00000557538 A0A1B0GUT8 65 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 TFF1P04155 84 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 COX7B2Q8TF08 81 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 ANKHD1Q8IWZ3 2542 aaKnown RBP0.83□□□□□ -2.28
HIF1A-212ENST00000557538 DOPEY1Q5JWR5 2465 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 GPR179Q6PRD1 2367 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 H3BPC8 53 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 PRB4P10163 310 aaPredicted RBP0.83□□□□□ -2.28
HIF1A-212ENST00000557538 CCL3L1P16619 93 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 PP632Q6XCG6 107 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 TMEM167BQ9NRX6 74 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 MRPL36Q9P0J6 103 aaKnown RBP0.83□□□□□ -2.28
HIF1A-212ENST00000557538 ARFGEF3Q5TH69 2177 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 H7C2G1 150 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 NDUFA3O95167 84 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 NBEAQ8NFP9 2946 aa0.83□□□□□ -2.28
HIF1A-212ENST00000557538 SPEGQ15772 3267 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 DNAH14Q0VDD8 3507 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 BRCA2P51587 3418 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 M0R2N4 97 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 DNAL4O96015 105 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 LINC00208Q96KT6 92 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 NCOR2Q9Y618 2525 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 PKHD1L1Q86WI1 4243 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 ZGRF1Q86YA3 2104 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.82□□□□□ -2.28
HIF1A-212ENST00000557538 A0A096LNT2 108 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 DMAC1Q96GE9 116 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 ORMDL1Q9P0S3 153 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 MGAQ8IWI9 3026 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 UNC80Q8N2C7 3258 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 BOD1L1Q8NFC6 3051 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 FBN1P35555 2871 aaKnown RBP0.82□□□□□ -2.28
HIF1A-212ENST00000557538 MED13Q9UHV7 2174 aa0.82□□□□□ -2.28
HIF1A-212ENST00000557538 NBDYA0A0U1RRE5 68 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 LOC730098B7Z3J9 87 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 JMJD7-PLA2G4BH0Y9G9 81 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 H3BQ85 93 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 Q6ZTI0 123 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 Q96NJ1 140 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 PRO2289Q9P1D8 64 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 CABIN1Q9Y6J0 2220 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 CELSR2Q9HCU4 2923 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 SETD2Q9BYW2 2564 aaPredicted RBP0.81□□□□□ -2.28
HIF1A-212ENST00000557538 SETXQ7Z333 2677 aaKnown RBP0.81□□□□□ -2.28
HIF1A-212ENST00000557538 H0Y9P7 68 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 K7ERS5 55 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 NCR3O14931 201 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 NDUFB1O75438 58 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 R4GMQ9 66 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 ESPL1Q14674 2120 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 XIRP2A4UGR9 3374 aa0.81□□□□□ -2.28
HIF1A-212ENST00000557538 MKI67P46013 3256 aaKnown RBP0.81□□□□□ -2.28
HIF1A-212ENST00000557538 CELSR3Q9NYQ7 3312 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 CFAP47Q6ZTR5 3102 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 IGHV3-64A0A075B6Q5 118 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 SPANXN5Q5MJ07 72 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 COA5Q86WW8 74 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 TTTY10Q9BZA0 68 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 MYO15AQ9UKN7 3530 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 INTS1Q8N201 2190 aaKnown RBP0.8□□□□□ -2.28
HIF1A-212ENST00000557538 SVILO95425 2214 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 PCLOQ9Y6V0 5065 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 DCHS1Q96JQ0 3298 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 TRBV6-4A0A1B0GX49 114 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 PPP1R17O96001 155 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 IAPPP10997 89 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 KRTAP10-1P60331 282 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 SPAG11BQ08648 103 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 KRTAP6-3Q3LI67 103 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 SPAG11AQ6PDA7 123 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 LINC00304Q8N9R0 145 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 LINC00308Q8TCZ7 52 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 PATE1Q8WXA2 126 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 SMIM2Q9BVW6 85 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 UBL5Q9BZL1 73 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 MUC3AQ02505 3323 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 DNAH1Q9P2D7 4330 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 NAV2Q8IVL1 2488 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 REV3LO60673 3130 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 M0R3E3 92 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 TPRXLQ17RH7 258 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 C10orf113Q5VZT2 155 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 SPACA4Q8TDM5 124 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 MINOS1-NBL1R4GNA1 71 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 CCDC168Q8NDH2 2452 aa0.8□□□□□ -2.28
HIF1A-212ENST00000557538 TTC28Q96AY4 2481 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms