RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 PET117Q6UWS5 81 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 PLEKHB2Q96CS7 222 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
HNRNPC-232ENST00000557442 TSPEAR-AS2P59090 65 aa6.57□□□□□ -1.36
HNRNPC-232ENST00000557442 UBE2BP63146 152 aa6.57□□□□□ -1.36
HNRNPC-232ENST00000557442 LINC01545Q5VT33 79 aa6.57□□□□□ -1.36
HNRNPC-232ENST00000557442 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
HNRNPC-232ENST00000557442 MYMXA0A1B0GTQ4 84 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 J3QQQ9 107 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 S100A6P06703 90 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 LINC00158P58513 81 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 HERV-K104P63124 156 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 PSORS1C2Q9UIG4 136 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 PKHD1L1Q86WI1 4243 aa6.56□□□□□ -1.36
HNRNPC-232ENST00000557442 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
HNRNPC-232ENST00000557442 LGALS3P17931 250 aaKnown RBP6.55□□□□□ -1.36
HNRNPC-232ENST00000557442 S100A2P29034 98 aa6.55□□□□□ -1.36
HNRNPC-232ENST00000557442 SND1-IT1Q9HBX3 110 aa6.55□□□□□ -1.36
HNRNPC-232ENST00000557442 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
HNRNPC-232ENST00000557442 C20orf202A1L168 122 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 SMIM13P0DJ93 91 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 C1orf137Q5JT78 98 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 HIST3H2BBQ8N257 126 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 NKAPP1Q8N9T2 125 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 TP73-AS1Q9UF72 201 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 PLA2G2DQ9UNK4 145 aa6.54□□□□□ -1.36
HNRNPC-232ENST00000557442 E9PLD3 99 aa6.53□□□□□ -1.36
HNRNPC-232ENST00000557442 NMUP48645 174 aa6.53□□□□□ -1.36
HNRNPC-232ENST00000557442 LBHQ53QV2 105 aaPredicted RBP6.53□□□□□ -1.36
HNRNPC-232ENST00000557442 KRTAP11-1Q8IUC1 163 aa6.53□□□□□ -1.36
HNRNPC-232ENST00000557442 LINC00587B1AMM8 73 aa6.52□□□□□ -1.37
HNRNPC-232ENST00000557442 HIST1H2BLQ99880 126 aa6.52□□□□□ -1.37
HNRNPC-232ENST00000557442 IGLV5-37A0A075B6J1 123 aa6.51□□□□□ -1.37
HNRNPC-232ENST00000557442 GAGE10A6NGK3 116 aa6.51□□□□□ -1.37
HNRNPC-232ENST00000557442 MIR7-3HGQ8N6C7 128 aa6.51□□□□□ -1.37
HNRNPC-232ENST00000557442 RPL37AP8A6NKH3 93 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 VPREB1P12018 145 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 SNRPEP62304 92 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 RPL24P83731 157 aaKnown RBP6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 LINC00167Q96N53 147 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 IGLV7-43P04211 117 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 SPINK6Q6UWN8 80 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 DAND5Q8N907 189 aa6.5□□□□□ -1.37
HNRNPC-232ENST00000557442 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
HNRNPC-232ENST00000557442 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
HNRNPC-232ENST00000557442 AKR1D1P51857 326 aa6.49□□□□□ -1.37
HNRNPC-232ENST00000557442 BOD1L2Q8IYS8 172 aa6.49□□□□□ -1.37
HNRNPC-232ENST00000557442 Q8NDZ9 215 aa6.49□□□□□ -1.37
HNRNPC-232ENST00000557442 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
HNRNPC-232ENST00000557442 IGKV2-28A0A075B6P5 120 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 A0A0J9YXY3 114 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 ZNF815PA8K554 130 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 OXTP01178 125 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 IGKV2D-28P01615 120 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.374e-16■■■□□ 16.3
HNRNPC-232ENST00000557442 MIEN1Q9BRT3 115 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 TTTY13Q9BZ97 58 aa6.48□□□□□ -1.37
HNRNPC-232ENST00000557442 C5orf52A6NGY3 159 aa6.47□□□□□ -1.37
HNRNPC-232ENST00000557442 NCR3O14931 201 aa6.47□□□□□ -1.37
HNRNPC-232ENST00000557442 ANKRD39Q53RE8 183 aa6.47□□□□□ -1.37
HNRNPC-232ENST00000557442 REG3GQ6UW15 175 aa6.47□□□□□ -1.37
HNRNPC-232ENST00000557442 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
HNRNPC-232ENST00000557442 DIRC1Q969H9 104 aa6.46□□□□□ -1.38
HNRNPC-232ENST00000557442 FAT3Q8TDW7 4589 aa6.45□□□□□ -1.38
HNRNPC-232ENST00000557442 IGLV1-50A0A075B6I6 118 aa6.45□□□□□ -1.38
HNRNPC-232ENST00000557442 M0R378 163 aa6.45□□□□□ -1.38
HNRNPC-232ENST00000557442 BCE1O60756 84 aa6.45□□□□□ -1.38
HNRNPC-232ENST00000557442 NPC2P61916 151 aa6.45□□□□□ -1.38
HNRNPC-232ENST00000557442 H0Y9J4 135 aa6.44□□□□□ -1.38
HNRNPC-232ENST00000557442 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
HNRNPC-232ENST00000557442 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 HSBP1L1C9JCN9 74 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 TMEM238C9JI98 176 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 ZNF861PO60384 105 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 TIMM17BO60830 172 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 SCGB1D1O95968 90 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 RPL28P46779 137 aaKnown RBP6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 LITAFQ99732 161 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 TMEM126AQ9H061 195 aa6.43□□□□□ -1.38
HNRNPC-232ENST00000557442 UBE2AP49459 152 aa6.42□□□□□ -1.38
HNRNPC-232ENST00000557442 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
HNRNPC-232ENST00000557442 PCP2Q8IVA1 136 aa6.42□□□□□ -1.38
HNRNPC-232ENST00000557442 EIF4EBP3O60516 100 aaPredicted RBP6.41□□□□□ -1.38
HNRNPC-232ENST00000557442 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
HNRNPC-232ENST00000557442 LINC01600Q96MT4 127 aa6.41□□□□□ -1.38
HNRNPC-232ENST00000557442 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
HNRNPC-232ENST00000557442 TRBV10-3A0A0K0K1G6 114 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 PRYO14603 147 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 NDUFC2O95298 119 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 MT1HL1P0DM35 61 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 PRLHP81277 87 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 LINC00308Q8TCZ7 52 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 KRTAP4-7Q9BYR0 210 aa6.4□□□□□ -1.39
HNRNPC-232ENST00000557442 TMA7Q9Y2S6 64 aaKnown RBP6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms