RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
SLIRP-210ENST00000557431 IGLV5-37A0A075B6J1 123 aa8.11□□□□□ -1.11
SLIRP-210ENST00000557431 TMEM238C9JI98 176 aa8.11□□□□□ -1.11
SLIRP-210ENST00000557431 IGKV2D-26A0A0A0MRZ7 120 aa8.1□□□□□ -1.11
SLIRP-210ENST00000557431 H3BRM9 83 aa8.1□□□□□ -1.11
SLIRP-210ENST00000557431 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
SLIRP-210ENST00000557431 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
SLIRP-210ENST00000557431 BAGE3Q86Y29 109 aa8.1□□□□□ -1.11
SLIRP-210ENST00000557431 ZNF22P17026 224 aaPredicted RBP8.09□□□□□ -1.11
SLIRP-210ENST00000557431 FAM229BQ4G0N7 80 aa8.09□□□□□ -1.11
SLIRP-210ENST00000557431 HSBP1O75506 76 aa8.08□□□□□ -1.12
SLIRP-210ENST00000557431 PFN2P35080 140 aa8.08□□□□□ -1.12
SLIRP-210ENST00000557431 IFI27L1Q96BM0 104 aa8.08□□□□□ -1.12
SLIRP-210ENST00000557431 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
SLIRP-210ENST00000557431 FAM19A2Q8N3H0 131 aa8.07□□□□□ -1.12
SLIRP-210ENST00000557431 Q8NDZ9 215 aa8.07□□□□□ -1.12
SLIRP-210ENST00000557431 CHTOPQ9Y3Y2 248 aaKnown RBP8.07□□□□□ -1.12
SLIRP-210ENST00000557431 TRAV12-1A0A0B4J245 112 aa8.06□□□□□ -1.12
SLIRP-210ENST00000557431 C11orf86A6NJI1 115 aa8.06□□□□□ -1.12
SLIRP-210ENST00000557431 VPREB1P12018 145 aa8.06□□□□□ -1.12
SLIRP-210ENST00000557431 LINC00310P59036 64 aa8.06□□□□□ -1.12
SLIRP-210ENST00000557431 TMEM126AQ9H061 195 aa8.06□□□□□ -1.12
SLIRP-210ENST00000557431 PPDPFQ9H3Y8 114 aa8.06□□□□□ -1.12
SLIRP-210ENST00000557431 SERF1AO75920 110 aa8.05□□□□□ -1.12
SLIRP-210ENST00000557431 M0R378 163 aa8.04□□□□□ -1.12
SLIRP-210ENST00000557431 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
SLIRP-210ENST00000557431 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
SLIRP-210ENST00000557431 PLEKHB2Q96CS7 222 aa8.03□□□□□ -1.12
SLIRP-210ENST00000557431 HIGD2AQ9BW72 106 aa8.03□□□□□ -1.12
SLIRP-210ENST00000557431 SND1-IT1Q9HBX3 110 aa8.03□□□□□ -1.12
SLIRP-210ENST00000557431 LEPROTL1O95214 131 aa8.02□□□□□ -1.13
SLIRP-210ENST00000557431 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
SLIRP-210ENST00000557431 DAND5Q8N907 189 aa8.01□□□□□ -1.13
SLIRP-210ENST00000557431 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
SLIRP-210ENST00000557431 TMEM223A0PJW6 202 aa8□□□□□ -1.13
SLIRP-210ENST00000557431 H0Y8G0 127 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BKO60814 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BJP06899 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 FABP4P15090 132 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BDP58876 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BCP62807 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST2H2BEQ16778 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.98□□□□□ -1.13
SLIRP-210ENST00000557431 SFTA2Q6UW10 78 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BHQ93079 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 HSPB8Q9UJY1 196 aa7.98□□□□□ -1.13
SLIRP-210ENST00000557431 A0A0U1RRA0 63 aa7.97□□□□□ -1.13
SLIRP-210ENST00000557431 COX17Q14061 63 aa7.97□□□□□ -1.13
SLIRP-210ENST00000557431 SPRR4Q96PI1 79 aa7.97□□□□□ -1.13
SLIRP-210ENST00000557431 RPL24P83731 157 aaKnown RBP7.96□□□□□ -1.14
SLIRP-210ENST00000557431 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.14
SLIRP-210ENST00000557431 Q8NBF4 154 aa7.96□□□□□ -1.14
SLIRP-210ENST00000557431 LINC00337Q8N6G1 96 aa7.94□□□□□ -1.14
SLIRP-210ENST00000557431 PLNP26678 52 aa7.93□□□□□ -1.14
SLIRP-210ENST00000557431 MAP1LC3CQ9BXW4 147 aa7.93□□□□□ -1.14
SLIRP-210ENST00000557431 DPM2O94777 84 aa7.92□□□□□ -1.14
SLIRP-210ENST00000557431 LINC01547P58512 204 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-210ENST00000557431 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
SLIRP-210ENST00000557431 C4orf48Q5BLP8 95 aa7.92□□□□□ -1.14
SLIRP-210ENST00000557431 SPAG11AQ6PDA7 123 aa7.92□□□□□ -1.14
SLIRP-210ENST00000557431 FP248Q71RG6 208 aaPredicted RBP7.92□□□□□ -1.14
SLIRP-210ENST00000557431 PMCHL2Q9BQD1 86 aa7.92□□□□□ -1.14
SLIRP-210ENST00000557431 IGKCP01834 107 aa7.91□□□□□ -1.14
SLIRP-210ENST00000557431 LINC00158P58513 81 aa7.91□□□□□ -1.14
SLIRP-210ENST00000557431 CTAG1AP78358 180 aa7.91□□□□□ -1.14
SLIRP-210ENST00000557431 NCR3O14931 201 aa7.9□□□□□ -1.14
SLIRP-210ENST00000557431 LEPROTO15243 131 aa7.9□□□□□ -1.14
SLIRP-210ENST00000557431 HERV-K104P63124 156 aa7.9□□□□□ -1.14
SLIRP-210ENST00000557431 SMCR5Q8TEV8 140 aa7.9□□□□□ -1.14
SLIRP-210ENST00000557431 NDUFA12Q9UI09 145 aa7.9□□□□□ -1.14
SLIRP-210ENST00000557431 MYMXA0A1B0GTQ4 84 aa7.89□□□□□ -1.15
SLIRP-210ENST00000557431 SMIM13P0DJ93 91 aa7.89□□□□□ -1.15
SLIRP-210ENST00000557431 TSPEAR-AS2P59090 65 aa7.89□□□□□ -1.15
SLIRP-210ENST00000557431 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
SLIRP-210ENST00000557431 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
SLIRP-210ENST00000557431 HERVK_113P61574 105 aa7.88□□□□□ -1.15
SLIRP-210ENST00000557431 MEIG1Q5JSS6 88 aa7.88□□□□□ -1.15
SLIRP-210ENST00000557431 LINC00587B1AMM8 73 aa7.87□□□□□ -1.15
SLIRP-210ENST00000557431 J3QQQ9 107 aa7.87□□□□□ -1.15
SLIRP-210ENST00000557431 ATP6V1G1O75348 118 aa7.87□□□□□ -1.15
SLIRP-210ENST00000557431 S100A1P23297 94 aa7.87□□□□□ -1.15
SLIRP-210ENST00000557431 ZNF706Q9Y5V0 76 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-210ENST00000557431 IGLV9-49A0A0B4J1Y8 123 aa7.86□□□□□ -1.15
SLIRP-210ENST00000557431 PRYO14603 147 aa7.86□□□□□ -1.15
SLIRP-210ENST00000557431 MOBPQ13875 183 aa7.86□□□□□ -1.15
SLIRP-210ENST00000557431 GAGE2AQ6NT46 116 aa7.86□□□□□ -1.15
SLIRP-210ENST00000557431 BOD1L2Q8IYS8 172 aa7.86□□□□□ -1.15
SLIRP-210ENST00000557431 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
SLIRP-210ENST00000557431 NMUP48645 174 aa7.85□□□□□ -1.15
SLIRP-210ENST00000557431 LINC01545Q5VT33 79 aa7.85□□□□□ -1.15
SLIRP-210ENST00000557431 PET117Q6UWS5 81 aa7.85□□□□□ -1.15
SLIRP-210ENST00000557431 CRCT1Q9UGL9 99 aa7.85□□□□□ -1.15
SLIRP-210ENST00000557431 TRBV10-3A0A0K0K1G6 114 aa7.84□□□□□ -1.15
SLIRP-210ENST00000557431 ETDCA0A1B0GVM5 59 aa7.84□□□□□ -1.15
SLIRP-210ENST00000557431 KRTAP4-16G5E9R7 235 aaPredicted RBP7.84□□□□□ -1.15
SLIRP-210ENST00000557431 ERC2-IT1O76042 136 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms