RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 LINC00474Q9P2X8 69 aa6.46□□□□□ -1.38
SHMT2-224ENST00000556737 PRR3P79522 188 aaKnown RBP6.45□□□□□ -1.38
SHMT2-224ENST00000556737 MEIG1Q5JSS6 88 aa6.45□□□□□ -1.38
SHMT2-224ENST00000556737 BOD1L2Q8IYS8 172 aa6.45□□□□□ -1.38
SHMT2-224ENST00000556737 Q8IZM0 81 aa6.45□□□□□ -1.38
SHMT2-224ENST00000556737 ZNF625Q96I27 306 aaPredicted RBP6.45□□□□□ -1.38
SHMT2-224ENST00000556737 MIEN1Q9BRT3 115 aa6.45□□□□□ -1.38
SHMT2-224ENST00000556737 NDUFA1O15239 70 aa6.44□□□□□ -1.38
SHMT2-224ENST00000556737 MT1HL1P0DM35 61 aa6.44□□□□□ -1.38
SHMT2-224ENST00000556737 C7orf33Q8WU49 177 aa6.44□□□□□ -1.38
SHMT2-224ENST00000556737 DLEU1O43261 78 aa6.43□□□□□ -1.38
SHMT2-224ENST00000556737 CXCL5P42830 114 aa6.43□□□□□ -1.38
SHMT2-224ENST00000556737 RPL18AQ02543 176 aaKnown RBP6.43□□□□□ -1.38
SHMT2-224ENST00000556737 KIAA0087Q14695 138 aa6.43□□□□□ -1.38
SHMT2-224ENST00000556737 RNF151Q2KHN1 245 aa6.43□□□□□ -1.38
SHMT2-224ENST00000556737 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
SHMT2-224ENST00000556737 C2orf82Q6UX34 121 aa6.43□□□□□ -1.38
SHMT2-224ENST00000556737 A0A0U1RRA0 63 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 A0A1W2PNN7 141 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 DDTP30046 118 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 HERV-K104P63124 156 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 GAGE2BQ13066 116 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 SFTA2Q6UW10 78 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
SHMT2-224ENST00000556737 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
SHMT2-224ENST00000556737 F8WDY8 70 aa6.41□□□□□ -1.38
SHMT2-224ENST00000556737 SRSF9Q13242 221 aaKnown RBP eCLIP6.41□□□□□ -1.38
SHMT2-224ENST00000556737 UNQ6190/PRO20217Q6UXQ8 127 aa6.41□□□□□ -1.38
SHMT2-224ENST00000556737 TMEM238C9JI98 176 aa6.4□□□□□ -1.38
SHMT2-224ENST00000556737 TLX1NBP0CAT3 122 aa6.4□□□□□ -1.38
SHMT2-224ENST00000556737 PFN2P35080 140 aa6.4□□□□□ -1.38
SHMT2-224ENST00000556737 LINC00158P58513 81 aa6.4□□□□□ -1.38
SHMT2-224ENST00000556737 C9orf116Q5BN46 136 aaPredicted RBP6.4□□□□□ -1.38
SHMT2-224ENST00000556737 Q6ZRP5 223 aa6.4□□□□□ -1.38
SHMT2-224ENST00000556737 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
SHMT2-224ENST00000556737 LINC00587B1AMM8 73 aa6.39□□□□□ -1.39
SHMT2-224ENST00000556737 SMIM13P0DJ93 91 aa6.39□□□□□ -1.39
SHMT2-224ENST00000556737 CTAG1AP78358 180 aa6.39□□□□□ -1.39
SHMT2-224ENST00000556737 C2orf91Q6ZV80 131 aa6.39□□□□□ -1.39
SHMT2-224ENST00000556737 ERG28Q9UKR5 140 aa6.39□□□□□ -1.39
SHMT2-224ENST00000556737 NPC2P61916 151 aa6.38□□□□□ -1.39
SHMT2-224ENST00000556737 BATFQ16520 125 aa6.38□□□□□ -1.39
SHMT2-224ENST00000556737 HIGD1BQ9P298 99 aa6.38□□□□□ -1.39
SHMT2-224ENST00000556737 TRBV30A0A0K0K1B3 111 aa6.37□□□□□ -1.39
SHMT2-224ENST00000556737 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
SHMT2-224ENST00000556737 HSD52Q0P140 79 aa6.37□□□□□ -1.39
SHMT2-224ENST00000556737 PHF5AQ7RTV0 110 aaKnown RBP6.37□□□□□ -1.39
SHMT2-224ENST00000556737 KRTAP7-1Q8IUC3 87 aa6.37□□□□□ -1.39
SHMT2-224ENST00000556737 DAND5Q8N907 189 aa6.37□□□□□ -1.39
SHMT2-224ENST00000556737 M0R143 59 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 TIMM17BO60830 172 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 HINT1P49773 126 aaPredicted RBP6.36□□□□□ -1.39
SHMT2-224ENST00000556737 GAGE2EQ4V326 116 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 KRTAP11-1Q8IUC1 163 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 GAGE2DQ9UEU5 116 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 PSORS1C2Q9UIG4 136 aa6.36□□□□□ -1.39
SHMT2-224ENST00000556737 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
SHMT2-224ENST00000556737 MIR7-3HGQ8N6C7 128 aa6.35□□□□□ -1.39
SHMT2-224ENST00000556737 COPS9Q8WXC6 57 aa6.35□□□□□ -1.39
SHMT2-224ENST00000556737 SPANXB1Q9NS25 103 aaPredicted RBP6.35□□□□□ -1.39
SHMT2-224ENST00000556737 NDUFC2-KCTD14E9PQ53 114 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 COX17Q14061 63 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 TAL2Q16559 108 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 C9orf129Q5T035 196 aaKnown RBP6.34□□□□□ -1.39
SHMT2-224ENST00000556737 ADAMTSL4-AS1Q5T5F5 129 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 FAM19A5Q7Z5A7 132 aaPredicted RBP6.34□□□□□ -1.39
SHMT2-224ENST00000556737 LINC01600Q96MT4 127 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 SPANXDQ9BXN6 97 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 SPANXCQ9NY87 97 aa6.34□□□□□ -1.39
SHMT2-224ENST00000556737 MUSTN1Q8IVN3 82 aa6.33□□□□□ -1.4
SHMT2-224ENST00000556737 CEND1Q8N111 149 aa6.33□□□□□ -1.4
SHMT2-224ENST00000556737 LITAFQ99732 161 aa6.33□□□□□ -1.4
SHMT2-224ENST00000556737 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
SHMT2-224ENST00000556737 A6NJY4 79 aa6.32□□□□□ -1.4
SHMT2-224ENST00000556737 IFITM1P13164 125 aa6.32□□□□□ -1.4
SHMT2-224ENST00000556737 RPL24P83731 157 aaKnown RBP6.32□□□□□ -1.4
SHMT2-224ENST00000556737 Q6ZVH6 145 aa6.32□□□□□ -1.4
SHMT2-224ENST00000556737 M0QXV9 152 aa6.31□□□□□ -1.4
SHMT2-224ENST00000556737 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
SHMT2-224ENST00000556737 BVES-AS1Q5T3Y7 98 aa6.31□□□□□ -1.4
SHMT2-224ENST00000556737 LINC00308Q8TCZ7 52 aa6.31□□□□□ -1.4
SHMT2-224ENST00000556737 PLA2G2DQ9UNK4 145 aa6.31□□□□□ -1.4
SHMT2-224ENST00000556737 A6NDN8 102 aa6.3□□□□□ -1.4
SHMT2-224ENST00000556737 FXYD2P54710 66 aa6.3□□□□□ -1.4
SHMT2-224ENST00000556737 KRTAP10-8P60410 259 aa6.3□□□□□ -1.4
SHMT2-224ENST00000556737 REG3GQ6UW15 175 aa6.3□□□□□ -1.4
SHMT2-224ENST00000556737 SND1-IT1Q9HBX3 110 aa6.3□□□□□ -1.4
SHMT2-224ENST00000556737 XAGE1AQ9HD64 81 aa6.3□□□□□ -1.4
SHMT2-224ENST00000556737 NHP2Q9NX24 153 aaKnown RBP6.3□□□□□ -1.4
SHMT2-224ENST00000556737 A4D1N5 150 aa6.29□□□□□ -1.4
SHMT2-224ENST00000556737 IGLV7-43P04211 117 aa6.29□□□□□ -1.4
SHMT2-224ENST00000556737 RAB37Q96AX2 223 aa6.29□□□□□ -1.4
SHMT2-224ENST00000556737 SOSTDC1Q6X4U4 206 aa6.28□□□□□ -1.4
SHMT2-224ENST00000556737 SNHG12Q9BXW3 62 aa6.28□□□□□ -1.4
SHMT2-224ENST00000556737 LRP2P98164 4655 aa6.28□□□□□ -1.4
SHMT2-224ENST00000556737 H0Y9J4 135 aa6.26□□□□□ -1.41
SHMT2-224ENST00000556737 K7ERJ3 54 aa6.26□□□□□ -1.41
SHMT2-224ENST00000556737 NCR3O14931 201 aa6.26□□□□□ -1.41
SHMT2-224ENST00000556737 EIF4EBP3O60516 100 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms