RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 HNRNPA3P51991 378 aaKnown RBP6.01□□□□□ -1.45
SRP54-210ENST00000556380 GAGE2EQ4V326 116 aa6.01□□□□□ -1.45
SRP54-210ENST00000556380 C9orf129Q5T035 196 aaKnown RBP6.01□□□□□ -1.45
SRP54-210ENST00000556380 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
SRP54-210ENST00000556380 MAP1LC3CQ9BXW4 147 aa6.01□□□□□ -1.45
SRP54-210ENST00000556380 GAGE2DQ9UEU5 116 aa6.01□□□□□ -1.45
SRP54-210ENST00000556380 FAM168BA1KXE4 195 aa6□□□□□ -1.45
SRP54-210ENST00000556380 HERC1Q15751 4861 aa6□□□□□ -1.45
SRP54-210ENST00000556380 C7orf33Q8WU49 177 aa5.99□□□□□ -1.45
SRP54-210ENST00000556380 ZNF625Q96I27 306 aaPredicted RBP5.99□□□□□ -1.45
SRP54-210ENST00000556380 DPM2O94777 84 aa5.98□□□□□ -1.45
SRP54-210ENST00000556380 AKR1D1P51857 326 aa5.98□□□□□ -1.45
SRP54-210ENST00000556380 COX17Q14061 63 aa5.98□□□□□ -1.45
SRP54-210ENST00000556380 PHF5AQ7RTV0 110 aaKnown RBP5.98□□□□□ -1.45
SRP54-210ENST00000556380 H0Y8G0 127 aa5.97□□□□□ -1.45
SRP54-210ENST00000556380 PRR3P79522 188 aaKnown RBP5.97□□□□□ -1.45
SRP54-210ENST00000556380 SERTAD4-AS1Q5TG53 156 aa5.97□□□□□ -1.45
SRP54-210ENST00000556380 PET117Q6UWS5 81 aa5.97□□□□□ -1.45
SRP54-210ENST00000556380 KRTAP11-1Q8IUC1 163 aa5.97□□□□□ -1.45
SRP54-210ENST00000556380 XAGE1AQ9HD64 81 aa5.97□□□□□ -1.45
SRP54-210ENST00000556380 SYS1-DBNDD2H3BUS1 97 aa5.96□□□□□ -1.46
SRP54-210ENST00000556380 IGKCP01834 107 aa5.96□□□□□ -1.46
SRP54-210ENST00000556380 HERVK_113P61574 105 aa5.96□□□□□ -1.46
SRP54-210ENST00000556380 FAM19A5Q7Z5A7 132 aaPredicted RBP5.96□□□□□ -1.46
SRP54-210ENST00000556380 PMCHL2Q9BQD1 86 aa5.96□□□□□ -1.46
SRP54-210ENST00000556380 TNXBP22105 4242 aa5.95□□□□□ -1.46
SRP54-210ENST00000556380 LINC00587B1AMM8 73 aa5.95□□□□□ -1.46
SRP54-210ENST00000556380 SRSF9Q13242 221 aaKnown RBP eCLIP5.95□□□□□ -1.46
SRP54-210ENST00000556380 PSORS1C2Q9UIG4 136 aa5.95□□□□□ -1.46
SRP54-210ENST00000556380 ERG28Q9UKR5 140 aa5.95□□□□□ -1.46
SRP54-210ENST00000556380 TSPEAR-AS2P59090 65 aa5.94□□□□□ -1.46
SRP54-210ENST00000556380 HERV-K104P63124 156 aa5.94□□□□□ -1.46
SRP54-210ENST00000556380 LINC01545Q5VT33 79 aa5.94□□□□□ -1.46
SRP54-210ENST00000556380 PLEKHB2Q96CS7 222 aa5.94□□□□□ -1.46
SRP54-210ENST00000556380 C22orf24Q9Y442 160 aa5.94□□□□□ -1.46
SRP54-210ENST00000556380 IGLV5-37A0A075B6J1 123 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 C20orf202A1L168 122 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 KRTAP29-1A8MX34 341 aaPredicted RBP5.93□□□□□ -1.46
SRP54-210ENST00000556380 M0QXV9 152 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 LEPROTO15243 131 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 S100A6P06703 90 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 C3orf79P0CE67 100 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 PFN2P35080 140 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 NMUP48645 174 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 SND1-IT1Q9HBX3 110 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 TP73-AS1Q9UF72 201 aa5.93□□□□□ -1.46
SRP54-210ENST00000556380 MYMXA0A1B0GTQ4 84 aa5.92□□□□□ -1.46
SRP54-210ENST00000556380 S100A2P29034 98 aa5.92□□□□□ -1.46
SRP54-210ENST00000556380 NDUFA12Q9UI09 145 aa5.92□□□□□ -1.46
SRP54-210ENST00000556380 J3QQQ9 107 aa5.91□□□□□ -1.46
SRP54-210ENST00000556380 OXTP01178 125 aa5.91□□□□□ -1.46
SRP54-210ENST00000556380 HIST3H2BBQ8N257 126 aa5.91□□□□□ -1.46
SRP54-210ENST00000556380 Q8NDZ9 215 aa5.91□□□□□ -1.46
SRP54-210ENST00000556380 E9PLD3 99 aa5.9□□□□□ -1.46
SRP54-210ENST00000556380 SMIM13P0DJ93 91 aa5.9□□□□□ -1.46
SRP54-210ENST00000556380 VPREB1P12018 145 aa5.9□□□□□ -1.46
SRP54-210ENST00000556380 LBHQ53QV2 105 aaPredicted RBP5.9□□□□□ -1.46
SRP54-210ENST00000556380 C1orf137Q5JT78 98 aa5.9□□□□□ -1.46
SRP54-210ENST00000556380 SPINK6Q6UWN8 80 aa5.9□□□□□ -1.46
SRP54-210ENST00000556380 MRPL55Q7Z7F7 128 aaKnown RBP5.9□□□□□ -1.46
SRP54-210ENST00000556380 IGLV7-43P04211 117 aa5.89□□□□□ -1.47
SRP54-210ENST00000556380 LGALS3P17931 250 aaKnown RBP5.89□□□□□ -1.47
SRP54-210ENST00000556380 LINC00158P58513 81 aa5.89□□□□□ -1.47
SRP54-210ENST00000556380 KRTDAPP60985 99 aa5.89□□□□□ -1.47
SRP54-210ENST00000556380 SNRPEP62304 92 aaKnown RBP5.89□□□□□ -1.47
SRP54-210ENST00000556380 LINC00167Q96N53 147 aa5.89□□□□□ -1.47
SRP54-210ENST00000556380 HIST1H2BLQ99880 126 aa5.89□□□□□ -1.47
SRP54-210ENST00000556380 A0A0U1RRA0 63 aa5.88□□□□□ -1.47
SRP54-210ENST00000556380 UBE2BP63146 152 aa5.88□□□□□ -1.47
SRP54-210ENST00000556380 RPL24P83731 157 aaKnown RBP5.88□□□□□ -1.47
SRP54-210ENST00000556380 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
SRP54-210ENST00000556380 C5orf52A6NGY3 159 aa5.87□□□□□ -1.47
SRP54-210ENST00000556380 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
SRP54-210ENST00000556380 MEIG1Q5JSS6 88 aa5.87□□□□□ -1.47
SRP54-210ENST00000556380 MIR7-3HGQ8N6C7 128 aa5.87□□□□□ -1.47
SRP54-210ENST00000556380 IGKV2D-26A0A0A0MRZ7 120 aa5.86□□□□□ -1.47
SRP54-210ENST00000556380 LOC107984156A0A0G2JMH3 177 aa5.86□□□□□ -1.47
SRP54-210ENST00000556380 GAGE10A6NGK3 116 aa5.86□□□□□ -1.47
SRP54-210ENST00000556380 ARL17AQ8IVW1 177 aa5.86□□□□□ -1.47
SRP54-210ENST00000556380 NKAPP1Q8N9T2 125 aa5.86□□□□□ -1.47
SRP54-210ENST00000556380 IGLV1-50A0A075B6I6 118 aa5.85□□□□□ -1.47
SRP54-210ENST00000556380 A0A0J9YXY3 114 aa5.85□□□□□ -1.47
SRP54-210ENST00000556380 RPL37AP8A6NKH3 93 aa5.85□□□□□ -1.47
SRP54-210ENST00000556380 ADAMTSL4-AS1Q5T5F5 129 aa5.85□□□□□ -1.47
SRP54-210ENST00000556380 LINC01600Q96MT4 127 aa5.85□□□□□ -1.47
SRP54-210ENST00000556380 H0Y9J4 135 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 M0R378 163 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 ZNF861PO60384 105 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 BCE1O60756 84 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 TIMM17BO60830 172 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 REG3GQ6UW15 175 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 KRTAP13-1Q8IUC0 172 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 BOD1L2Q8IYS8 172 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 DAND5Q8N907 189 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 DIRC1Q969H9 104 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 LITAFQ99732 161 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 TTTY13Q9BZ97 58 aa5.83□□□□□ -1.48
SRP54-210ENST00000556380 IGKV2-28A0A075B6P5 120 aa5.82□□□□□ -1.48
SRP54-210ENST00000556380 HSBP1L1C9JCN9 74 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms